Carg04269-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg04269-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	peroxisome biogenesis protein 2
Location	Cucurbita_argyrosperma_scaffold_044 : 1128538 .. 1129563 (-)
Sequence length	535

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCACTCCTCTTCGTCTCCACTTACTCTCCCACCATTAACAGCGCCACGGACCTCTCCCTTCTTCGCTTCGCGCTGCAACTCATCCATTTGTCATGGTCATAGAATCCTTAGCTGCAGCTCCCGCCAGCTCCTCCTCTTCGTCTTCGCCTTCCACCAGCGCCTCCCATCTTTCTCCACCTCCTGAAGATGCATGGACTCTTGCTTATCAGCGGCTACTTCCTCGCTGGAAATCTCTTTCCCAGTCTCACTTGGTACCTTCATCCCTCTCTCTTTGTCTCGCACCCAGCCTAATTTTGTCTGCTTATTTGTTCCCTTTTTTATTTGTTCATAGTTGCCTTTTGATTCTGTGGCGTAGGTCTTTTTGTCCGTTCGTTGCTATGTATATACTAGAGTTTGTTTCTAATTAATAGCTTTACCGAAGATCATTTCTGACACATGGTTGGGAAAGATTGCATTCGTGTTAATTGAGCTTCACTTTCTGTTTGTTTCGTTGTCCAAGCCATGCGAGAGTTAAATTTTCTTCTACTTGCACCTTGAACAGTACATGTATTGTAATTTGATATTGGTTGATACATCTGTACTAATTTATGATACTGGAGTCTTTTTTTTTTTCTTTTTCTTTTTCTTTTCTATCTATTCTGCAGTCGCCAATTCCAATTTCGATATCGAAAGTTAATCAAGTGGATGCGGCGCGGCTAGATATTGAAATGTCAGCCATGTTGAAAGAGCAGTTGGTTAAGGTCTTCGCTTTGATGAAGGTATATGTTGCTTGTTATTCGGGCATTGAGATGTAGATACTTGGCTAGTAAAGTTATTTAGGCGTCATAAAGTATTTTCTTCTACTTTGATGGATTAGCCAGGAATGTTGTTTCAATATGAAGCAGAGCTTGATGCTTTTCTGGAGTTCCTTATTTGGCGCTTTTCAATTTGGGTAGACAAACCCACACCAGGAATTGCTCTGATGAATCTGCGGTATAGAGATGAGCGTGCAATGGAAATTCCAGGAAAAGGTGAAATGATCTAA

mRNA sequence

AATCACTCCTCTTCGTCTCCACTTACTCTCCCACCATTAACAGCGCCACGGACCTCTCCCTTCTTCGCTTCGCGCTGCAACTCATCCATTTGTCATGGTCATAGAATCCTTAGCTGCAGCTCCCGCCAGCTCCTCCTCTTCGTCTTCGCCTTCCACCAGCGCCTCCCATCTTTCTCCACCTCCTGAAGATGCATGGACTCTTGCTTATCAGCGGCTACTTCCTCGCTGGAAATCTCTTTCCCAGTCTCACTTGTCGCCAATTCCAATTTCGATATCGAAAGTTAATCAAGTGGATGCGGCGCGGCTAGATATTGAAATGTCAGCCATGTTGAAAGAGCAGTTGGTTAAGGTCTTCGCTTTGATGAAGCCAGGAATGTTGTTTCAATATGAAGCAGAGCTTGATGCTTTTCTGGAGTTCCTTATTTGGCGCTTTTCAATTTGGGTAGACAAACCCACACCAGGAATTGCTCTGATGAATCTGCGGTATAGAGATGAGCGTGCAATGGAAATTCCAGGAAAAGGTGAAATGATCTAA

Coding sequence (CDS)

ATGGTCATAGAATCCTTAGCTGCAGCTCCCGCCAGCTCCTCCTCTTCGTCTTCGCCTTCCACCAGCGCCTCCCATCTTTCTCCACCTCCTGAAGATGCATGGACTCTTGCTTATCAGCGGCTACTTCCTCGCTGGAAATCTCTTTCCCAGTCTCACTTGTCGCCAATTCCAATTTCGATATCGAAAGTTAATCAAGTGGATGCGGCGCGGCTAGATATTGAAATGTCAGCCATGTTGAAAGAGCAGTTGGTTAAGGTCTTCGCTTTGATGAAGCCAGGAATGTTGTTTCAATATGAAGCAGAGCTTGATGCTTTTCTGGAGTTCCTTATTTGGCGCTTTTCAATTTGGGTAGACAAACCCACACCAGGAATTGCTCTGATGAATCTGCGGTATAGAGATGAGCGTGCAATGGAAATTCCAGGAAAAGGTGAAATGATCTAA

Protein sequence

MVIESLAAAPASSSSSSSPSTSASHLSPPPEDAWTLAYQRLLPRWKSLSQSHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMKPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAMEIPGKGEMI

Homology

[Close]

BLAST of Carg04269-RA vs. NCBI nr
Match: XP_023524869.1 (peroxisome biogenesis protein 2 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023524870.1 peroxisome biogenesis protein 2 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023524872.1 peroxisome biogenesis protein 2 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 227.3 bits (578), Expect = 3.5e-56
Identity = 139/142 (97.89%), Postives = 140/142 (98.59%), Query Frame = 0


Query: 1   MVIESLAXXXXXXXXXXXXXXXXXXXXXXXEDAWTLAYQRLLPRWKSLSQSHLSPIPISI 60
           MVIESLAXXXXXXXXXXXXXXXXXXXXX  EDAW+LAYQRLLPRWKSLSQSHLSPIPISI
Sbjct: 1   MVIESLAXXXXXXXXXXXXXXXXXXXXXPPEDAWSLAYQRLLPRWKSLSQSHLSPIPISI 60

Query: 61  SKVNQVDAARLDIEMSAMLKEQLVKVFALMKPGMLFQYEAELDAFLEFLIWRFSIWVDKP 120
           SKVNQVDAARLDIEMSAMLKEQLVKVFALMKPGMLFQYEAELDAFLEFLIWRFSIWVDKP
Sbjct: 61  SKVNQVDAARLDIEMSAMLKEQLVKVFALMKPGMLFQYEAELDAFLEFLIWRFSIWVDKP 120

Query: 121 TPGIALMNLRYRDERAMEIPGK 143
           TPGIALMNLRYRDERAMEIPGK
Sbjct: 121 TPGIALMNLRYRDERAMEIPGK 142

[Close]

BLAST of Carg04269-RA vs. NCBI nr
Match: XP_022997964.1 (peroxisome biogenesis protein 2 [Cucurbita maxima])

HSP 1 Score: 224.9 bits (572), Expect = 1.7e-55
Identity = 135/142 (95.07%), Postives = 138/142 (97.18%), Query Frame = 0


Query: 1   MVIESLAXXXXXXXXXXXXXXXXXXXXXXXEDAWTLAYQRLLPRWKSLSQSHLSPIPISI 60
           MVI+SLAXXXXXXXXXXXXXXXXXXX    +DAW+LAYQRLLPRWKSLSQSHLSPIPISI
Sbjct: 1   MVIQSLAXXXXXXXXXXXXXXXXXXXSPPPQDAWSLAYQRLLPRWKSLSQSHLSPIPISI 60

Query: 61  SKVNQVDAARLDIEMSAMLKEQLVKVFALMKPGMLFQYEAELDAFLEFLIWRFSIWVDKP 120
           SKVNQVDAARLDIEMSAMLKEQLVKVFALMKPGMLFQYEAELDAFLEFLIWRFSIWVDKP
Sbjct: 61  SKVNQVDAARLDIEMSAMLKEQLVKVFALMKPGMLFQYEAELDAFLEFLIWRFSIWVDKP 120

Query: 121 TPGIALMNLRYRDERAMEIPGK 143
           TPGIALMNLRYRDERAMEIPGK
Sbjct: 121 TPGIALMNLRYRDERAMEIPGK 142

[Close]

BLAST of Carg04269-RA vs. NCBI nr
Match: XP_022948765.1 (peroxisome biogenesis protein 2-like [Cucurbita moschata])

HSP 1 Score: 221.9 bits (564), Expect = 1.5e-54
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 31  EDAWTLAYQRLLPRWKSLSQSHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALM 90
           EDAWTLA+QRLLPRWKSLSQSHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALM
Sbjct: 31  EDAWTLAHQRLLPRWKSLSQSHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALM 90

Query: 91  KPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAMEIPGK 143
           KPGMLFQYEAELDAFL FLIWRFSIWVDKPTPGIALMNLRYRDERAMEIPGK
Sbjct: 91  KPGMLFQYEAELDAFLAFLIWRFSIWVDKPTPGIALMNLRYRDERAMEIPGK 142

[Close]

BLAST of Carg04269-RA vs. NCBI nr
Match: XP_008447525.1 (PREDICTED: peroxisome biogenesis protein 2 [Cucumis melo])

HSP 1 Score: 214.9 bits (546), Expect = 1.8e-52
Identity = 107/110 (97.27%), Postives = 108/110 (98.18%), Query Frame = 0


Query: 33  AWTLAYQRLLPRWKSLSQSHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMKP 92
           AWTLA QRLLPRWKSLS SHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMKP
Sbjct: 33  AWTLASQRLLPRWKSLSHSHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMKP 92

Query: 93  GMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAMEIPGK 143
           GMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDER+MEIPGK
Sbjct: 93  GMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERSMEIPGK 142

[Close]

BLAST of Carg04269-RA vs. NCBI nr
Match: XP_022980766.1 (peroxisome biogenesis protein 2-like [Cucurbita maxima])

HSP 1 Score: 214.9 bits (546), Expect = 1.8e-52
Identity = 105/112 (93.75%), Postives = 109/112 (97.32%), Query Frame = 0


Query: 31  EDAWTLAYQRLLPRWKSLSQSHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALM 90
           EDAW+ AYQRL PRWKSLS SHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALM
Sbjct: 28  EDAWSRAYQRLHPRWKSLSHSHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALM 87

Query: 91  KPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAMEIPGK 143
           KPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGI+LMNLRYRDERA+E+PGK
Sbjct: 88  KPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGISLMNLRYRDERALEVPGK 139

[Close]

BLAST of Carg04269-RA vs. TAIR10
Match: AT1G79810.1 (Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 171.8 bits (434), Expect = 3.1e-43
Identity = 85/107 (79.44%), Postives = 93/107 (86.92%), Query Frame = 0


Query: 31  EDAWTLAYQRLLPRWKSLSQSHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALM 90
           +DAW  +YQRLLP  +SL  S  S IP++IS+VNQ DAARLD+EMSAMLKEQLVKVF LM
Sbjct: 8   DDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLM 67

Query: 91  KPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAM 138
           KPGMLFQYE ELDAFLEFLIWRFSIWVDKPTPG ALMNLRYRDER +
Sbjct: 68  KPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGV 114

[Close]

BLAST of Carg04269-RA vs. Swiss-Prot
Match: sp|Q9CA86|PEX2_ARATH (Peroxisome biogenesis protein 2 OS=Arabidopsis thaliana OX=3702 GN=PEX2 PE=1 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 5.7e-42
Identity = 85/107 (79.44%), Postives = 93/107 (86.92%), Query Frame = 0


Query: 31  EDAWTLAYQRLLPRWKSLSQSHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALM 90
           +DAW  +YQRLLP  +SL  S  S IP++IS+VNQ DAARLD+EMSAMLKEQLVKVF LM
Sbjct: 8   DDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLM 67

Query: 91  KPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAM 138
           KPGMLFQYE ELDAFLEFLIWRFSIWVDKPTPG ALMNLRYRDER +
Sbjct: 68  KPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGV 114

[Close]

BLAST of Carg04269-RA vs. Swiss-Prot
Match: sp|Q75JQ3|PEX2_DICDI (Peroxisome biogenesis factor 2 OS=Dictyostelium discoideum OX=44689 GN=pex2 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-08
Identity = 30/80 (37.50%), Postives = 52/80 (65.00%), Query Frame = 0


Query: 59  SISKVNQVDAARLDIEMSAMLKEQLVKVFALMKPGMLFQYEAELDAFLEFLIWRFSIWVD 118
           SI +V+Q+D+ARLD E+  +L+ Q +K+F   KP  +  ++ E++  L+ +I++ SI+  
Sbjct: 107 SIVRVSQLDSARLDEEILDLLRSQFMKIFTFFKPNFIHNFQPEINLVLKSVIYKLSIFNL 166

Query: 119 KPTPGIALMNLRYRDERAME 139
             T G  L NL YR+E+A +
Sbjct: 167 GTTYGNQLQNLTYRNEKAFD 186

[Close]

BLAST of Carg04269-RA vs. Swiss-Prot
Match: sp|P24392|PEX2_RAT (Peroxisome biogenesis factor 2 OS=Rattus norvegicus OX=10116 GN=Pex2 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.0e-06
Identity = 23/75 (30.67%), Postives = 48/75 (64.00%), Query Frame = 0


Query: 60  ISKVNQVDAARLDIEMSAMLKEQLVKVFALMKPGMLFQYEAELDAFLEFLIWRFSIWVDK 119
           + +++Q+DA  L+  +  ++  Q  + F   KPG+L ++E E+ AFL   +WRF+I+   
Sbjct: 14  VLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKAFLWLFLWRFTIYSKN 73

Query: 120 PTPGIALMNLRYRDE 135
            T G +++N++Y+++
Sbjct: 74  ATVGQSVLNIQYKND 88

[Close]

BLAST of Carg04269-RA vs. Swiss-Prot
Match: sp|P55098|PEX2_MOUSE (Peroxisome biogenesis factor 2 OS=Mus musculus OX=10090 GN=Pex2 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.8e-06
Identity = 22/75 (29.33%), Postives = 48/75 (64.00%), Query Frame = 0


Query: 60  ISKVNQVDAARLDIEMSAMLKEQLVKVFALMKPGMLFQYEAELDAFLEFLIWRFSIWVDK 119
           + +++Q+DA  L+  +  ++  Q  + F   KPG+L ++E E+ AFL   +WRF+I+   
Sbjct: 14  VLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKAFLWLFLWRFTIYSKN 73

Query: 120 PTPGIALMNLRYRDE 135
            T G +++N++++++
Sbjct: 74  ATVGQSVLNIQHKND 88

[Close]

BLAST of Carg04269-RA vs. Swiss-Prot
Match: sp|Q06438|PEX2_CRIGR (Peroxisome biogenesis factor 2 OS=Cricetulus griseus OX=10029 GN=PEX2 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 8.6e-06
Identity = 22/75 (29.33%), Postives = 47/75 (62.67%), Query Frame = 0


Query: 60  ISKVNQVDAARLDIEMSAMLKEQLVKVFALMKPGMLFQYEAELDAFLEFLIWRFSIWVDK 119
           + +++Q+DA  L+  +  ++  Q  + F   KPG+L ++E E+ A L   +WRF+I+   
Sbjct: 13  VLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKACLWLFLWRFTIYSKN 72

Query: 120 PTPGIALMNLRYRDE 135
            T G +++N++Y+++
Sbjct: 73  ATVGQSVLNIQYKND 87

[Close]

BLAST of Carg04269-RA vs. TrEMBL
Match: tr|A0A1S3BIJ1|A0A1S3BIJ1_CUCME (peroxisome biogenesis protein 2 OS=Cucumis melo OX=3656 GN=LOC103489952 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.2e-52
Identity = 107/110 (97.27%), Postives = 108/110 (98.18%), Query Frame = 0


Query: 33  AWTLAYQRLLPRWKSLSQSHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMKP 92
           AWTLA QRLLPRWKSLS SHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMKP
Sbjct: 33  AWTLASQRLLPRWKSLSHSHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMKP 92

Query: 93  GMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAMEIPGK 143
           GMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDER+MEIPGK
Sbjct: 93  GMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERSMEIPGK 142

[Close]

BLAST of Carg04269-RA vs. TrEMBL
Match: tr|A0A0A0LDC6|A0A0A0LDC6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G471200 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 5.9e-52
Identity = 106/110 (96.36%), Postives = 107/110 (97.27%), Query Frame = 0


Query: 33  AWTLAYQRLLPRWKSLSQSHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMKP 92
           AWT A QRLLPRWKSLS SHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMKP
Sbjct: 33  AWTRASQRLLPRWKSLSHSHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMKP 92

Query: 93  GMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAMEIPGK 143
           GMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDER+MEIPGK
Sbjct: 93  GMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERSMEIPGK 142

[Close]

BLAST of Carg04269-RA vs. TrEMBL
Match: tr|A0A2I4GH68|A0A2I4GH68_9ROSI (peroxisome biogenesis protein 2-like OS=Juglans regia OX=51240 GN=LOC109007842 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.5e-47
Identity = 96/112 (85.71%), Postives = 102/112 (91.07%), Query Frame = 0


Query: 31  EDAWTLAYQRLLPRWKSLSQSHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALM 90
           EDAW   Y++ LP WKSLS SH S IPISIS+VNQVDAARLD+EMSAMLKEQLVKVF+LM
Sbjct: 36  EDAWVETYRKFLPHWKSLSHSHQSAIPISISRVNQVDAARLDVEMSAMLKEQLVKVFSLM 95

Query: 91  KPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAMEIPGK 143
           KPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRD+RAME  GK
Sbjct: 96  KPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDDRAMETRGK 147

[Close]

BLAST of Carg04269-RA vs. TrEMBL
Match: tr|A0A2I4HE05|A0A2I4HE05_9ROSI (peroxisome biogenesis protein 2-like OS=Juglans regia OX=51240 GN=LOC109016424 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.5e-47
Identity = 96/112 (85.71%), Postives = 102/112 (91.07%), Query Frame = 0


Query: 31  EDAWTLAYQRLLPRWKSLSQSHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALM 90
           EDAW   Y++ LP WKSLS SH S IPISIS+VNQVDAARLD+EMSAMLKEQLVKVF+LM
Sbjct: 36  EDAWVETYRKFLPHWKSLSHSHQSAIPISISRVNQVDAARLDVEMSAMLKEQLVKVFSLM 95

Query: 91  KPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAMEIPGK 143
           KPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRD+RAME  GK
Sbjct: 96  KPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDDRAMETRGK 147

[Close]

BLAST of Carg04269-RA vs. TrEMBL
Match: tr|I3SMI5|I3SMI5_LOTJA (Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 4.8e-46
Identity = 94/108 (87.04%), Postives = 101/108 (93.52%), Query Frame = 0


Query: 31  EDAWTLAYQRLLPRWKSLSQSHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALM 90
           +DAWTL    LLPRW+SLS SH S IP++IS+VNQVDAARLD+EMSAMLKEQLVKVFALM
Sbjct: 16  QDAWTLTCHNLLPRWESLSLSHQSTIPVTISRVNQVDAARLDVEMSAMLKEQLVKVFALM 75

Query: 91  KPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAME 139
           KPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERA+E
Sbjct: 76  KPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAVE 123

The following BLAST results are available for this feature:

BLAST of Carg04269-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023524869.1	3.5e-56	97.89	peroxisome biogenesis protein 2 isoform X1 [Cucurbita pepo subsp. pepo] >XP_0235...	[more]
XP_022997964.1	1.7e-55	95.07	peroxisome biogenesis protein 2 [Cucurbita maxima]	[more]
XP_022948765.1	1.5e-54	98.21	peroxisome biogenesis protein 2-like [Cucurbita moschata]	[more]
XP_008447525.1	1.8e-52	97.27	PREDICTED: peroxisome biogenesis protein 2 [Cucumis melo]	[more]
XP_022980766.1	1.8e-52	93.75	peroxisome biogenesis protein 2-like [Cucurbita maxima]	[more]

BLAST of Carg04269-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT1G79810.1	3.1e-43	79.44	Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING f...	[more]

BLAST of Carg04269-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9CA86\|PEX2_ARATH	5.7e-42	79.44	Peroxisome biogenesis protein 2 OS=Arabidopsis thaliana OX=3702 GN=PEX2 PE=1 SV=...	[more]
sp\|Q75JQ3\|PEX2_DICDI	1.4e-08	37.50	Peroxisome biogenesis factor 2 OS=Dictyostelium discoideum OX=44689 GN=pex2 PE=3...	[more]
sp\|P24392\|PEX2_RAT	1.0e-06	30.67	Peroxisome biogenesis factor 2 OS=Rattus norvegicus OX=10116 GN=Pex2 PE=2 SV=1	[more]
sp\|P55098\|PEX2_MOUSE	3.8e-06	29.33	Peroxisome biogenesis factor 2 OS=Mus musculus OX=10090 GN=Pex2 PE=2 SV=1	[more]
sp\|Q06438\|PEX2_CRIGR	8.6e-06	29.33	Peroxisome biogenesis factor 2 OS=Cricetulus griseus OX=10029 GN=PEX2 PE=1 SV=1	[more]

BLAST of Carg04269-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BIJ1\|A0A1S3BIJ1_CUCME	1.2e-52	97.27	peroxisome biogenesis protein 2 OS=Cucumis melo OX=3656 GN=LOC103489952 PE=4 SV=...	[more]
tr\|A0A0A0LDC6\|A0A0A0LDC6_CUCSA	5.9e-52	96.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G471200 PE=4 SV=1	[more]
tr\|A0A2I4GH68\|A0A2I4GH68_9ROSI	2.5e-47	85.71	peroxisome biogenesis protein 2-like OS=Juglans regia OX=51240 GN=LOC109007842 P...	[more]
tr\|A0A2I4HE05\|A0A2I4HE05_9ROSI	2.5e-47	85.71	peroxisome biogenesis protein 2-like OS=Juglans regia OX=51240 GN=LOC109016424 P...	[more]
tr\|I3SMI5\|I3SMI5_LOTJA	4.8e-46	87.04	Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR006845	Pex_N

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg04269	Carg04269	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg04269-RA	Carg04269-RA-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg04269-RA.CDS.3	Carg04269-RA.CDS.3	CDS
Carg04269-RA.CDS.2	Carg04269-RA.CDS.2	CDS
Carg04269-RA.CDS.1	Carg04269-RA.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg04269-RA.five_prime_UTR.1	Carg04269-RA.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg04269-RA.exon.3	Carg04269-RA.exon.3	exon
Carg04269-RA.exon.2	Carg04269-RA.exon.2	exon
Carg04269-RA.exon.1	Carg04269-RA.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006845	Pex, N-terminal	PFAM	PF04757	Pex2_Pex12	coord: 74..141 e-value: 2.2E-8 score: 33.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PANTHER	PTHR45174	FAMILY NOT NAMED	coord: 22..142