Carg04269 (gene) Silver-seed gourd

Overview
NameCarg04269
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionperoxisome biogenesis protein 2
LocationCucurbita_argyrosperma_scaffold_044 : 1128538 .. 1129563 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AATCACTCCTCTTCGTCTCCACTTACTCTCCCACCATTAACAGCGCCACGGACCTCTCCCTTCTTCGCTTCGCGCTGCAACTCATCCATTTGTCATGGTCATAGAATCCTTAGCTGCAGCTCCCGCCAGCTCCTCCTCTTCGTCTTCGCCTTCCACCAGCGCCTCCCATCTTTCTCCACCTCCTGAAGATGCATGGACTCTTGCTTATCAGCGGCTACTTCCTCGCTGGAAATCTCTTTCCCAGTCTCACTTGGTACCTTCATCCCTCTCTCTTTGTCTCGCACCCAGCCTAATTTTGTCTGCTTATTTGTTCCCTTTTTTATTTGTTCATAGTTGCCTTTTGATTCTGTGGCGTAGGTCTTTTTGTCCGTTCGTTGCTATGTATATACTAGAGTTTGTTTCTAATTAATAGCTTTACCGAAGATCATTTCTGACACATGGTTGGGAAAGATTGCATTCGTGTTAATTGAGCTTCACTTTCTGTTTGTTTCGTTGTCCAAGCCATGCGAGAGTTAAATTTTCTTCTACTTGCACCTTGAACAGTACATGTATTGTAATTTGATATTGGTTGATACATCTGTACTAATTTATGATACTGGAGTCTTTTTTTTTTTCTTTTTCTTTTTCTTTTCTATCTATTCTGCAGTCGCCAATTCCAATTTCGATATCGAAAGTTAATCAAGTGGATGCGGCGCGGCTAGATATTGAAATGTCAGCCATGTTGAAAGAGCAGTTGGTTAAGGTCTTCGCTTTGATGAAGGTATATGTTGCTTGTTATTCGGGCATTGAGATGTAGATACTTGGCTAGTAAAGTTATTTAGGCGTCATAAAGTATTTTCTTCTACTTTGATGGATTAGCCAGGAATGTTGTTTCAATATGAAGCAGAGCTTGATGCTTTTCTGGAGTTCCTTATTTGGCGCTTTTCAATTTGGGTAGACAAACCCACACCAGGAATTGCTCTGATGAATCTGCGGTATAGAGATGAGCGTGCAATGGAAATTCCAGGAAAAGGTGAAATGATCTAA

mRNA sequence

AATCACTCCTCTTCGTCTCCACTTACTCTCCCACCATTAACAGCGCCACGGACCTCTCCCTTCTTCGCTTCGCGCTGCAACTCATCCATTTGTCATGGTCATAGAATCCTTAGCTGCAGCTCCCGCCAGCTCCTCCTCTTCGTCTTCGCCTTCCACCAGCGCCTCCCATCTTTCTCCACCTCCTGAAGATGCATGGACTCTTGCTTATCAGCGGCTACTTCCTCGCTGGAAATCTCTTTCCCAGTCTCACTTGTCGCCAATTCCAATTTCGATATCGAAAGTTAATCAAGTGGATGCGGCGCGGCTAGATATTGAAATGTCAGCCATGTTGAAAGAGCAGTTGGTTAAGGTCTTCGCTTTGATGAAGCCAGGAATGTTGTTTCAATATGAAGCAGAGCTTGATGCTTTTCTGGAGTTCCTTATTTGGCGCTTTTCAATTTGGGTAGACAAACCCACACCAGGAATTGCTCTGATGAATCTGCGGTATAGAGATGAGCGTGCAATGGAAATTCCAGGAAAAGGTGAAATGATCTAA

Coding sequence (CDS)

ATGGTCATAGAATCCTTAGCTGCAGCTCCCGCCAGCTCCTCCTCTTCGTCTTCGCCTTCCACCAGCGCCTCCCATCTTTCTCCACCTCCTGAAGATGCATGGACTCTTGCTTATCAGCGGCTACTTCCTCGCTGGAAATCTCTTTCCCAGTCTCACTTGTCGCCAATTCCAATTTCGATATCGAAAGTTAATCAAGTGGATGCGGCGCGGCTAGATATTGAAATGTCAGCCATGTTGAAAGAGCAGTTGGTTAAGGTCTTCGCTTTGATGAAGCCAGGAATGTTGTTTCAATATGAAGCAGAGCTTGATGCTTTTCTGGAGTTCCTTATTTGGCGCTTTTCAATTTGGGTAGACAAACCCACACCAGGAATTGCTCTGATGAATCTGCGGTATAGAGATGAGCGTGCAATGGAAATTCCAGGAAAAGGTGAAATGATCTAA

Protein sequence

MVIESLAAAPASSSSSSSPSTSASHLSPPPEDAWTLAYQRLLPRWKSLSQSHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMKPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAMEIPGKGEMI
Homology
[Close]
BLAST of Carg04269 vs. NCBI nr
Match: XP_023524869.1 (peroxisome biogenesis protein 2 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023524870.1 peroxisome biogenesis protein 2 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023524872.1 peroxisome biogenesis protein 2 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 227.3 bits (578), Expect = 3.5e-56
Identity = 139/142 (97.89%), Postives = 140/142 (98.59%), Query Frame = 0 

Query: 1   MVIESLAXXXXXXXXXXXXXXXXXXXXXXXEDAWTLAYQRLLPRWKSLSQSHLSPIPISI 60
           MVIESLAXXXXXXXXXXXXXXXXXXXXX  EDAW+LAYQRLLPRWKSLSQSHLSPIPISI
Sbjct: 1   MVIESLAXXXXXXXXXXXXXXXXXXXXXPPEDAWSLAYQRLLPRWKSLSQSHLSPIPISI 60

Query: 61  SKVNQVDAARLDIEMSAMLKEQLVKVFALMKPGMLFQYEAELDAFLEFLIWRFSIWVDKP 120
           SKVNQVDAARLDIEMSAMLKEQLVKVFALMKPGMLFQYEAELDAFLEFLIWRFSIWVDKP
Sbjct: 61  SKVNQVDAARLDIEMSAMLKEQLVKVFALMKPGMLFQYEAELDAFLEFLIWRFSIWVDKP 120

Query: 121 TPGIALMNLRYRDERAMEIPGK 143
           TPGIALMNLRYRDERAMEIPGK
Sbjct: 121 TPGIALMNLRYRDERAMEIPGK 142

[Close]
BLAST of Carg04269 vs. NCBI nr
Match: XP_022997964.1 (peroxisome biogenesis protein 2 [Cucurbita maxima])

HSP 1 Score: 224.9 bits (572), Expect = 1.7e-55
Identity = 135/142 (95.07%), Postives = 138/142 (97.18%), Query Frame = 0 

Query: 1   MVIESLAXXXXXXXXXXXXXXXXXXXXXXXEDAWTLAYQRLLPRWKSLSQSHLSPIPISI 60
           MVI+SLAXXXXXXXXXXXXXXXXXXX    +DAW+LAYQRLLPRWKSLSQSHLSPIPISI
Sbjct: 1   MVIQSLAXXXXXXXXXXXXXXXXXXXSPPPQDAWSLAYQRLLPRWKSLSQSHLSPIPISI 60

Query: 61  SKVNQVDAARLDIEMSAMLKEQLVKVFALMKPGMLFQYEAELDAFLEFLIWRFSIWVDKP 120
           SKVNQVDAARLDIEMSAMLKEQLVKVFALMKPGMLFQYEAELDAFLEFLIWRFSIWVDKP
Sbjct: 61  SKVNQVDAARLDIEMSAMLKEQLVKVFALMKPGMLFQYEAELDAFLEFLIWRFSIWVDKP 120

Query: 121 TPGIALMNLRYRDERAMEIPGK 143
           TPGIALMNLRYRDERAMEIPGK
Sbjct: 121 TPGIALMNLRYRDERAMEIPGK 142

[Close]
BLAST of Carg04269 vs. NCBI nr
Match: XP_022948765.1 (peroxisome biogenesis protein 2-like [Cucurbita moschata])

HSP 1 Score: 221.9 bits (564), Expect = 1.5e-54
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 31  EDAWTLAYQRLLPRWKSLSQSHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALM 90
           EDAWTLA+QRLLPRWKSLSQSHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALM
Sbjct: 31  EDAWTLAHQRLLPRWKSLSQSHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALM 90

Query: 91  KPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAMEIPGK 143
           KPGMLFQYEAELDAFL FLIWRFSIWVDKPTPGIALMNLRYRDERAMEIPGK
Sbjct: 91  KPGMLFQYEAELDAFLAFLIWRFSIWVDKPTPGIALMNLRYRDERAMEIPGK 142

[Close]
BLAST of Carg04269 vs. NCBI nr
Match: XP_008447525.1 (PREDICTED: peroxisome biogenesis protein 2 [Cucumis melo])

HSP 1 Score: 214.9 bits (546), Expect = 1.8e-52
Identity = 107/110 (97.27%), Postives = 108/110 (98.18%), Query Frame = 0 

Query: 33  AWTLAYQRLLPRWKSLSQSHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMKP 92
           AWTLA QRLLPRWKSLS SHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMKP
Sbjct: 33  AWTLASQRLLPRWKSLSHSHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMKP 92

Query: 93  GMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAMEIPGK 143
           GMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDER+MEIPGK
Sbjct: 93  GMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERSMEIPGK 142

[Close]
BLAST of Carg04269 vs. NCBI nr
Match: XP_022980766.1 (peroxisome biogenesis protein 2-like [Cucurbita maxima])

HSP 1 Score: 214.9 bits (546), Expect = 1.8e-52
Identity = 105/112 (93.75%), Postives = 109/112 (97.32%), Query Frame = 0 

Query: 31  EDAWTLAYQRLLPRWKSLSQSHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALM 90
           EDAW+ AYQRL PRWKSLS SHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALM
Sbjct: 28  EDAWSRAYQRLHPRWKSLSHSHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALM 87

Query: 91  KPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAMEIPGK 143
           KPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGI+LMNLRYRDERA+E+PGK
Sbjct: 88  KPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGISLMNLRYRDERALEVPGK 139

[Close]
BLAST of Carg04269 vs. TAIR10
Match: AT1G79810.1 (Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 171.8 bits (434), Expect = 3.1e-43
Identity = 85/107 (79.44%), Postives = 93/107 (86.92%), Query Frame = 0 

Query: 31  EDAWTLAYQRLLPRWKSLSQSHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALM 90
           +DAW  +YQRLLP  +SL  S  S IP++IS+VNQ DAARLD+EMSAMLKEQLVKVF LM
Sbjct: 8   DDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLM 67

Query: 91  KPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAM 138
           KPGMLFQYE ELDAFLEFLIWRFSIWVDKPTPG ALMNLRYRDER +
Sbjct: 68  KPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGV 114

[Close]
BLAST of Carg04269 vs. Swiss-Prot
Match: sp|Q9CA86|PEX2_ARATH (Peroxisome biogenesis protein 2 OS=Arabidopsis thaliana OX=3702 GN=PEX2 PE=1 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 5.7e-42
Identity = 85/107 (79.44%), Postives = 93/107 (86.92%), Query Frame = 0 

Query: 31  EDAWTLAYQRLLPRWKSLSQSHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALM 90
           +DAW  +YQRLLP  +SL  S  S IP++IS+VNQ DAARLD+EMSAMLKEQLVKVF LM
Sbjct: 8   DDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLM 67

Query: 91  KPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAM 138
           KPGMLFQYE ELDAFLEFLIWRFSIWVDKPTPG ALMNLRYRDER +
Sbjct: 68  KPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGV 114

[Close]
BLAST of Carg04269 vs. Swiss-Prot
Match: sp|Q75JQ3|PEX2_DICDI (Peroxisome biogenesis factor 2 OS=Dictyostelium discoideum OX=44689 GN=pex2 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-08
Identity = 30/80 (37.50%), Postives = 52/80 (65.00%), Query Frame = 0 

Query: 59  SISKVNQVDAARLDIEMSAMLKEQLVKVFALMKPGMLFQYEAELDAFLEFLIWRFSIWVD 118
           SI +V+Q+D+ARLD E+  +L+ Q +K+F   KP  +  ++ E++  L+ +I++ SI+  
Sbjct: 107 SIVRVSQLDSARLDEEILDLLRSQFMKIFTFFKPNFIHNFQPEINLVLKSVIYKLSIFNL 166

Query: 119 KPTPGIALMNLRYRDERAME 139
             T G  L NL YR+E+A +
Sbjct: 167 GTTYGNQLQNLTYRNEKAFD 186

[Close]
BLAST of Carg04269 vs. Swiss-Prot
Match: sp|P24392|PEX2_RAT (Peroxisome biogenesis factor 2 OS=Rattus norvegicus OX=10116 GN=Pex2 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.0e-06
Identity = 23/75 (30.67%), Postives = 48/75 (64.00%), Query Frame = 0 

Query: 60  ISKVNQVDAARLDIEMSAMLKEQLVKVFALMKPGMLFQYEAELDAFLEFLIWRFSIWVDK 119
           + +++Q+DA  L+  +  ++  Q  + F   KPG+L ++E E+ AFL   +WRF+I+   
Sbjct: 14  VLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKAFLWLFLWRFTIYSKN 73

Query: 120 PTPGIALMNLRYRDE 135
            T G +++N++Y+++
Sbjct: 74  ATVGQSVLNIQYKND 88

[Close]
BLAST of Carg04269 vs. Swiss-Prot
Match: sp|P55098|PEX2_MOUSE (Peroxisome biogenesis factor 2 OS=Mus musculus OX=10090 GN=Pex2 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.8e-06
Identity = 22/75 (29.33%), Postives = 48/75 (64.00%), Query Frame = 0 

Query: 60  ISKVNQVDAARLDIEMSAMLKEQLVKVFALMKPGMLFQYEAELDAFLEFLIWRFSIWVDK 119
           + +++Q+DA  L+  +  ++  Q  + F   KPG+L ++E E+ AFL   +WRF+I+   
Sbjct: 14  VLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKAFLWLFLWRFTIYSKN 73

Query: 120 PTPGIALMNLRYRDE 135
            T G +++N++++++
Sbjct: 74  ATVGQSVLNIQHKND 88

[Close]
BLAST of Carg04269 vs. Swiss-Prot
Match: sp|Q06438|PEX2_CRIGR (Peroxisome biogenesis factor 2 OS=Cricetulus griseus OX=10029 GN=PEX2 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 8.6e-06
Identity = 22/75 (29.33%), Postives = 47/75 (62.67%), Query Frame = 0 

Query: 60  ISKVNQVDAARLDIEMSAMLKEQLVKVFALMKPGMLFQYEAELDAFLEFLIWRFSIWVDK 119
           + +++Q+DA  L+  +  ++  Q  + F   KPG+L ++E E+ A L   +WRF+I+   
Sbjct: 13  VLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKACLWLFLWRFTIYSKN 72

Query: 120 PTPGIALMNLRYRDE 135
            T G +++N++Y+++
Sbjct: 73  ATVGQSVLNIQYKND 87

[Close]
BLAST of Carg04269 vs. TrEMBL
Match: tr|A0A1S3BIJ1|A0A1S3BIJ1_CUCME (peroxisome biogenesis protein 2 OS=Cucumis melo OX=3656 GN=LOC103489952 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.2e-52
Identity = 107/110 (97.27%), Postives = 108/110 (98.18%), Query Frame = 0 

Query: 33  AWTLAYQRLLPRWKSLSQSHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMKP 92
           AWTLA QRLLPRWKSLS SHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMKP
Sbjct: 33  AWTLASQRLLPRWKSLSHSHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMKP 92

Query: 93  GMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAMEIPGK 143
           GMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDER+MEIPGK
Sbjct: 93  GMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERSMEIPGK 142

[Close]
BLAST of Carg04269 vs. TrEMBL
Match: tr|A0A0A0LDC6|A0A0A0LDC6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G471200 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 5.9e-52
Identity = 106/110 (96.36%), Postives = 107/110 (97.27%), Query Frame = 0 

Query: 33  AWTLAYQRLLPRWKSLSQSHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMKP 92
           AWT A QRLLPRWKSLS SHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMKP
Sbjct: 33  AWTRASQRLLPRWKSLSHSHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALMKP 92

Query: 93  GMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAMEIPGK 143
           GMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDER+MEIPGK
Sbjct: 93  GMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERSMEIPGK 142

[Close]
BLAST of Carg04269 vs. TrEMBL
Match: tr|A0A2I4GH68|A0A2I4GH68_9ROSI (peroxisome biogenesis protein 2-like OS=Juglans regia OX=51240 GN=LOC109007842 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.5e-47
Identity = 96/112 (85.71%), Postives = 102/112 (91.07%), Query Frame = 0 

Query: 31  EDAWTLAYQRLLPRWKSLSQSHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALM 90
           EDAW   Y++ LP WKSLS SH S IPISIS+VNQVDAARLD+EMSAMLKEQLVKVF+LM
Sbjct: 36  EDAWVETYRKFLPHWKSLSHSHQSAIPISISRVNQVDAARLDVEMSAMLKEQLVKVFSLM 95

Query: 91  KPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAMEIPGK 143
           KPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRD+RAME  GK
Sbjct: 96  KPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDDRAMETRGK 147

[Close]
BLAST of Carg04269 vs. TrEMBL
Match: tr|A0A2I4HE05|A0A2I4HE05_9ROSI (peroxisome biogenesis protein 2-like OS=Juglans regia OX=51240 GN=LOC109016424 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.5e-47
Identity = 96/112 (85.71%), Postives = 102/112 (91.07%), Query Frame = 0 

Query: 31  EDAWTLAYQRLLPRWKSLSQSHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALM 90
           EDAW   Y++ LP WKSLS SH S IPISIS+VNQVDAARLD+EMSAMLKEQLVKVF+LM
Sbjct: 36  EDAWVETYRKFLPHWKSLSHSHQSAIPISISRVNQVDAARLDVEMSAMLKEQLVKVFSLM 95

Query: 91  KPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAMEIPGK 143
           KPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRD+RAME  GK
Sbjct: 96  KPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDDRAMETRGK 147

[Close]
BLAST of Carg04269 vs. TrEMBL
Match: tr|I3SMI5|I3SMI5_LOTJA (Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 4.8e-46
Identity = 94/108 (87.04%), Postives = 101/108 (93.52%), Query Frame = 0 

Query: 31  EDAWTLAYQRLLPRWKSLSQSHLSPIPISISKVNQVDAARLDIEMSAMLKEQLVKVFALM 90
           +DAWTL    LLPRW+SLS SH S IP++IS+VNQVDAARLD+EMSAMLKEQLVKVFALM
Sbjct: 16  QDAWTLTCHNLLPRWESLSLSHQSTIPVTISRVNQVDAARLDVEMSAMLKEQLVKVFALM 75

Query: 91  KPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAME 139
           KPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERA+E
Sbjct: 76  KPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAVE 123

The following BLAST results are available for this feature:
BLAST of Carg04269 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023524869.13.5e-5697.89peroxisome biogenesis protein 2 isoform X1 [Cucurbita pepo subsp. pepo] >XP_0235... [more]
XP_022997964.11.7e-5595.07peroxisome biogenesis protein 2 [Cucurbita maxima][more]
XP_022948765.11.5e-5498.21peroxisome biogenesis protein 2-like [Cucurbita moschata][more]
XP_008447525.11.8e-5297.27PREDICTED: peroxisome biogenesis protein 2 [Cucumis melo][more]
XP_022980766.11.8e-5293.75peroxisome biogenesis protein 2-like [Cucurbita maxima][more]
BLAST of Carg04269 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G79810.13.1e-4379.44Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING f... [more]
BLAST of Carg04269 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9CA86|PEX2_ARATH5.7e-4279.44Peroxisome biogenesis protein 2 OS=Arabidopsis thaliana OX=3702 GN=PEX2 PE=1 SV=... [more]
sp|Q75JQ3|PEX2_DICDI1.4e-0837.50Peroxisome biogenesis factor 2 OS=Dictyostelium discoideum OX=44689 GN=pex2 PE=3... [more]
sp|P24392|PEX2_RAT1.0e-0630.67Peroxisome biogenesis factor 2 OS=Rattus norvegicus OX=10116 GN=Pex2 PE=2 SV=1[more]
sp|P55098|PEX2_MOUSE3.8e-0629.33Peroxisome biogenesis factor 2 OS=Mus musculus OX=10090 GN=Pex2 PE=2 SV=1[more]
sp|Q06438|PEX2_CRIGR8.6e-0629.33Peroxisome biogenesis factor 2 OS=Cricetulus griseus OX=10029 GN=PEX2 PE=1 SV=1[more]
BLAST of Carg04269 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BIJ1|A0A1S3BIJ1_CUCME1.2e-5297.27peroxisome biogenesis protein 2 OS=Cucumis melo OX=3656 GN=LOC103489952 PE=4 SV=... [more]
tr|A0A0A0LDC6|A0A0A0LDC6_CUCSA5.9e-5296.36Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G471200 PE=4 SV=1[more]
tr|A0A2I4GH68|A0A2I4GH68_9ROSI2.5e-4785.71peroxisome biogenesis protein 2-like OS=Juglans regia OX=51240 GN=LOC109007842 P... [more]
tr|A0A2I4HE05|A0A2I4HE05_9ROSI2.5e-4785.71peroxisome biogenesis protein 2-like OS=Juglans regia OX=51240 GN=LOC109016424 P... [more]
tr|I3SMI5|I3SMI5_LOTJA4.8e-4687.04Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006845Pex_N
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg04269-RACarg04269-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006845Pex, N-terminalPFAMPF04757Pex2_Pex12coord: 74..141
e-value: 2.2E-8
score: 33.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availablePANTHERPTHR45174FAMILY NOT NAMEDcoord: 22..142

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg04269Watermelon (97103) v2carwmbB0201
Carg04269Watermelon (97103) v2carwmbB0205
Carg04269Wax gourdcarwgoB0249
Carg04269Silver-seed gourdcarcarB042
Carg04269Silver-seed gourdcarcarB139
Carg04269Silver-seed gourdcarcarB233
Carg04269Silver-seed gourdcarcarB234
Carg04269Silver-seed gourdcarcarB238
Carg04269Silver-seed gourdcarcarB240
Carg04269Cucumber (Gy14) v2carcgybB0212
Carg04269Cucumber (Gy14) v1carcgyB0239
Carg04269Cucurbita maxima (Rimu)carcmaB0270
Carg04269Cucurbita maxima (Rimu)carcmaB0276
Carg04269Cucurbita maxima (Rimu)carcmaB0277
Carg04269Cucurbita maxima (Rimu)carcmaB0278
Carg04269Cucurbita maxima (Rimu)carcmaB0282
Carg04269Cucurbita maxima (Rimu)carcmaB0283
Carg04269Cucurbita moschata (Rifu)carcmoB0277
Carg04269Cucurbita moschata (Rifu)carcmoB0279
Carg04269Cucurbita moschata (Rifu)carcmoB0283
Carg04269Cucurbita moschata (Rifu)carcmoB0284
Carg04269Cucurbita moschata (Rifu)carcmoB0285
Carg04269Cucurbita moschata (Rifu)carcmoB0289
Carg04269Cucurbita pepo (Zucchini)carcpeB0280
Carg04269Cucurbita pepo (Zucchini)carcpeB0283
Carg04269Cucurbita pepo (Zucchini)carcpeB0284
Carg04269Cucurbita pepo (Zucchini)carcpeB0285
Carg04269Cucurbita pepo (Zucchini)carcpeB0287
Carg04269Cucurbita pepo (Zucchini)carcpeB0290
Carg04269Wild cucumber (PI 183967)carcpiB0224
Carg04269Wild cucumber (PI 183967)carcpiB0231
Carg04269Cucumber (Chinese Long) v2carcuB0217
Carg04269Cucumber (Chinese Long) v2carcuB0224
Carg04269Cucumber (Chinese Long) v3carcucB0223
Carg04269Cucumber (Chinese Long) v3carcucB0227
Carg04269Bottle gourd (USVL1VR-Ls)carlsiB175
Carg04269Bottle gourd (USVL1VR-Ls)carlsiB182
Carg04269Melon (DHL92) v3.5.1carmeB0204
Carg04269Melon (DHL92) v3.5.1carmeB0209
Carg04269Melon (DHL92) v3.6.1carmedB0209
Carg04269Melon (DHL92) v3.6.1carmedB0214
Carg04269Watermelon (Charleston Gray)carwcgB0192
Carg04269Watermelon (Charleston Gray)carwcgB0199
Carg04269Watermelon (97103) v1carwmB0192
Carg04269Watermelon (97103) v1carwmB0195