Carg03982-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg03982-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	prostaglandin E synthase 2-like
Location	Cucurbita_argyrosperma_scaffold_011 : 1168007 .. 1170450 (-)
Sequence length	1543

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTGCACTCTCCTTACATCGACGGCTGAAATCGTACCAATTTCTCTTCCCCAAACCCTTGTAAAACCTTGCAAAAGAGTTCAACTTCCAGAGAAATCTCGGTCGCCATGAGGAGGATTAATGGAGTTCGCGTACTCAGCCGGATTGTAAGCGGTGAGGCCAACACCGCCACTGTCACCGCTGATCGGCGGCTACTCCATCCATCGGCGGTTCACAGAACGTTCATTGGATCTGATATTCGGTGTTTCTCGCAAGCGAAGAATCCATTTGGTTTGTATTGTCCTTCTTTTGCTCGGAATGTTGCAGGGAATGGTCGGTGCTTCTCTGTGGCCTCTTCATCTTCGGTTCATGATGTGGTTAATGACCTACCTCGTTTGTCTTTCGCACCCAAGGATGTGGTTCTCTATCAATATGAGGCTTGCCCGTTCTGCAACAAAGTTAAAGGTAATTAGCATAATCTCTTAGAGGAATTCTCAGAATATGAAGTTTTTGTCAACTTGATCTTGATAAGAAAAATAGAGAAGGTGGATTAAGGACTGGACAATAGGCCATATATTACTGTTACCTATGAGCTGAAGCTAGAATTCTTGTCGTGAAGTTGCAATTCTATGCCATTTTTCCTTTCTAGGTCCTTAAAATTTCTGTTGATTTTCCTTTTCCTCCAGCATTCTTGGATTACTACAATGTTCCTTATAAAGTTGTGGAGGTGAATCCCATATTCAAAAAGGAGATCAAGTGGTCTGAATACAAGAAGGTTCCAATTCTGATGGTTGATGGTGTTCAAATGGTGGATTCTACAGGTTCAGTCAAATCTGTAATTACTTGGAAAATGGAGAATACATACATATATACATACATACATATATATATATACATACATATATAAATATATATATATGTTTTCAATTAGAGTAGTTGTTGATGATCGGGCCTGTCTTGCTTGTTCTTGTACAGATATAATTGATAAGTTGTACAAAAGAATTCATCCAGAGAATTCTACCTCGGACTCAGAGGAGGAGAGGAAGTGGCTTGGGTATACTTTTTTTTTTTTTTTACATCTCGAGGCTCTATACTTGCTTACAAGCAGCTATTATATGGACCCAATTGAGACTTTAAGGGAAACCAGCGTCTTCATTGACAAAGAATTTGACTGACTAATTTGTCTTTCGACATTTTTGTGTATCATATGTAACTGATTGATGAGCATATATTATGTAGATGGGTGGACAATCACCTGGTGCACGTTTTATCCCCGAACATTTACAGAAATTACAAGGAGGCTCTCGAGTCTTTCAACTACATAACTACACATGGTATGATAGTAAATCAATTTATGAGCCGTTCTTTTTTTTTTTTTTTTCCTTTAGTTCTTTGAATTATATATGAGCTGGAGACGGTTTCTAGGGCCCTGTTTGATAACAATTTGATTTTTGGTTTTTAAACGTTAAGCTGTTAATACTGTTTATCACTTGTGGGTTTATTTCTTTTCTATTTTTTTCCAATGTTTTCAAAATCCAAGCCAAGTTTGAATACTCACTTTCATTTATTTTCAATATTCACTTTATAATTTGTATTGCCTTATTCCAATTATTGTATTCATAAGAAAACATCCTCAACATGATTTTTTGTTTGTTTGTTTGTTGTTCATGTTGTTGAAGCAATCGCATATATTCGTGAGCTCCTGGCTTGTCTGTATAACTTTAATATGGTGCAGGAAATTTTAGTTTCACTCAAAGGATAATAGCCAAGTATGGCGGGGCTACAGCCATGTATTTTGTTACCAAGAAATTGAAAGAGAAACATAACATCACTGATGAACGAAAAGCCTTATATGGAGCTGCAGAAACATGGGTGGAAGCACTGAAAGACCGTCAGTTTCTTGGTATGCTTAACTTCATTCACGATTCTGTTCGGTTATTTAGGTTTCAGCTAACGGTATTTGAGAAAAACAGTTCAATTTTACGACGAATTTGTCTCTCGATAGGTGGACCAAATCCTAATTTAGCTGATCTTGCCGTCTTCGGTGTCTTGAGACCAATCCGACACCTTCAATCTGGAATAGATATGGTAGAGAATACAAGAGTTGGCGAATGGTATTCTAGAATGGAGGATGCTGTGGGAGAGTCTTCAAGGATCGTCTCTTGAAGTTGGTACAATTTATAGTTTTTGTTTCTGTATTACTCAATATCCTGCCAGTTTATTGATAAATATCTGAACTTTTTTTAACATCAGATCCTAAAAGATCGTCTGTGAGAATAATCTGCTAGATCCATGTAGCGAATTGCGAGTTTCTCATCCTTTTAGATGATTGCTTCTATATTTGTATTTAATGTGGTGATTCCTTGTTCTACTTAACTGTATTGTGAACAACCTAAATGCTATCGAAGTGTTGACAGAACATAGGTACATTCTAAAAGGATTTACTTTATGTTTTTATGAGAAACA

mRNA sequence

TCTGCACTCTCCTTACATCGACGGCTGAAATCGTACCAATTTCTCTTCCCCAAACCCTTGTAAAACCTTGCAAAAGAGTTCAACTTCCAGAGAAATCTCGGTCGCCATGAGGAGGATTAATGGAGTTCGCGTACTCAGCCGGATTGTAAGCGGTGAGGCCAACACCGCCACTGTCACCGCTGATCGGCGGCTACTCCATCCATCGGCGGTTCACAGAACGTTCATTGGATCTGATATTCGGTGTTTCTCGCAAGCGAAGAATCCATTTGGTTTGTATTGTCCTTCTTTTGCTCGGAATGTTGCAGGGAATGGTCGGTGCTTCTCTGTGGCCTCTTCATCTTCGGTTCATGATGTGGTTAATGACCTACCTCGTTTGTCTTTCGCACCCAAGGATGTGGTTCTCTATCAATATGAGGCTTGCCCGTTCTGCAACAAAGTTAAAGCATTCTTGGATTACTACAATGTTCCTTATAAAGTTGTGGAGGTGAATCCCATATTCAAAAAGGAGATCAAGTGGTCTGAATACAAGAAGGTTCCAATTCTGATGGTTGATGGTGTTCAAATGGTGGATTCTACAGGTTCAGTCAAATCTGTAATTACTTGGAAAATGGAGAATACATACATATATACATACATACATATATATATATACATACATATATAAATATATATATATGTTTTCAATTAGAGTAGTTGTTGATGATCGGGCCTGTCTTGCTTGTTCTTGTACAGATATAATTGATAAGTTGTACAAAAGAATTCATCCAGAGAATTCTACCTCGGACTCAGAGGAGGAGAGGAAGTGGCTTGGATGGGTGGACAATCACCTGGTGCACGTTTTATCCCCGAACATTTACAGAAATTACAAGGAGGCTCTCGAGTCTTTCAACTACATAACTACACATGGTATGATAGAAATTTTAGTTTCACTCAAAGGATAATAGCCAAGTATGGCGGGGCTACAGCCATGTATTTTGTTACCAAGAAATTGAAAGAGAAACATAACATCACTGATGAACGAAAAGCCTTATATGGAGCTGCAGAAACATGGGTGGAAGCACTGAAAGACCGTCAGTTTCTTGGTGGACCAAATCCTAATTTAGCTGATCTTGCCGTCTTCGGTGTCTTGAGACCAATCCGACACCTTCAATCTGGAATAGATATGGTAGAGAATACAAGAGTTGGCGAATGGTATTCTAGAATGGAGGATGCTGTGGGAGAGTCTTCAAGGATCGTCTCTTGAAGTTGGTACAATTTATAGTTTTTGTTTCTGTATTACTCAATATCCTGCCAGTTTATTGATAAATATCTGAACTTTTTTTAACATCAGATCCTAAAAGATCGTCTGTGAGAATAATCTGCTAGATCCATGTAGCGAATTGCGAGTTTCTCATCCTTTTAGATGATTGCTTCTATATTTGTATTTAATGTGGTGATTCCTTGTTCTACTTAACTGTATTGTGAACAACCTAAATGCTATCGAAGTGTTGACAGAACATAGGTACATTCTAAAAGGATTTACTTTATGTTTTTATGAGAAACA

Coding sequence (CDS)

ATGAGGAGGATTAATGGAGTTCGCGTACTCAGCCGGATTGTAAGCGGTGAGGCCAACACCGCCACTGTCACCGCTGATCGGCGGCTACTCCATCCATCGGCGGTTCACAGAACGTTCATTGGATCTGATATTCGGTGTTTCTCGCAAGCGAAGAATCCATTTGGTTTGTATTGTCCTTCTTTTGCTCGGAATGTTGCAGGGAATGGTCGGTGCTTCTCTGTGGCCTCTTCATCTTCGGTTCATGATGTGGTTAATGACCTACCTCGTTTGTCTTTCGCACCCAAGGATGTGGTTCTCTATCAATATGAGGCTTGCCCGTTCTGCAACAAAGTTAAAGCATTCTTGGATTACTACAATGTTCCTTATAAAGTTGTGGAGGTGAATCCCATATTCAAAAAGGAGATCAAGTGGTCTGAATACAAGAAGGTTCCAATTCTGATGGTTGATGGTGTTCAAATGGTGGATTCTACAGGTTCAGTCAAATCTGTAATTACTTGGAAAATGGAGAATACATACATATATACATACATACATATATATATATACATACATATATAA

Protein sequence

MRRINGVRVLSRIVSGEANTATVTADRRLLHPSAVHRTFIGSDIRCFSQAKNPFGLYCPSFARNVAGNGRCFSVASSSSVHDVVNDLPRLSFAPKDVVLYQYEACPFCNKVKAFLDYYNVPYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDSTGSVKSVITWKMENTYIYTYIHIYIYIHI

Homology

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BLAST of Carg03982-RA vs. NCBI nr
Match: XP_023537861.1 (uncharacterized protein LOC111798767 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 318.9 bits (816), Expect = 1.1e-83
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 1   MRRINGVRVLSRIVSGEANTATVTADRRLLHPSAVHRTFIGSDIRCFSQAKNPFGLYCPS 60
           MRRINGVRVLSR VSGEANTATVTADRRLLHPSAVHRTFIGSDIRCFSQAKNPFGLYCPS
Sbjct: 1   MRRINGVRVLSRFVSGEANTATVTADRRLLHPSAVHRTFIGSDIRCFSQAKNPFGLYCPS 60

Query: 61  FARNVAGNGRCFSVASSSSVHDVVNDLPRLSFAPKDVVLYQYEACPFCNKVKAFLDYYNV 120
           FARNVAGNGRCFSVASSSSVHDVVNDLPRLSFAPKDVVLYQYEACPFCNKVKAFLDYYNV
Sbjct: 61  FARNVAGNGRCFSVASSSSVHDVVNDLPRLSFAPKDVVLYQYEACPFCNKVKAFLDYYNV 120

Query: 121 PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDST 158
           PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDST
Sbjct: 121 PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDST 157

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BLAST of Carg03982-RA vs. NCBI nr
Match: XP_023536773.1 (prostaglandin E synthase 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 315.5 bits (807), Expect = 1.2e-82
Identity = 155/157 (98.73%), Postives = 155/157 (98.73%), Query Frame = 0


Query: 1   MRRINGVRVLSRIVSGEANTATVTADRRLLHPSAVHRTFIGSDIRCFSQAKNPFGLYCPS 60
           MRRINGVRVLSR VSGEANTATVTADRRLLHPSAVHRTFIGSDIRCFSQAKNPFGLYC S
Sbjct: 1   MRRINGVRVLSRFVSGEANTATVTADRRLLHPSAVHRTFIGSDIRCFSQAKNPFGLYCHS 60

Query: 61  FARNVAGNGRCFSVASSSSVHDVVNDLPRLSFAPKDVVLYQYEACPFCNKVKAFLDYYNV 120
           FARNVAGNGRCFSVASSSSVHDVVNDLPRLSFAPKDVVLYQYEACPFCNKVKAFLDYYNV
Sbjct: 61  FARNVAGNGRCFSVASSSSVHDVVNDLPRLSFAPKDVVLYQYEACPFCNKVKAFLDYYNV 120

Query: 121 PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDST 158
           PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDST
Sbjct: 121 PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDST 157

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BLAST of Carg03982-RA vs. NCBI nr
Match: XP_023002430.1 (prostaglandin E synthase 2-like [Cucurbita maxima])

HSP 1 Score: 314.3 bits (804), Expect = 2.7e-82
Identity = 154/157 (98.09%), Postives = 154/157 (98.09%), Query Frame = 0


Query: 1   MRRINGVRVLSRIVSGEANTATVTADRRLLHPSAVHRTFIGSDIRCFSQAKNPFGLYCPS 60
           MRRINGVRVLSRIVSGEANTATVTADRRLLHPSAVHRT IGSDIRCFSQ KNPFGLYCPS
Sbjct: 1   MRRINGVRVLSRIVSGEANTATVTADRRLLHPSAVHRTSIGSDIRCFSQGKNPFGLYCPS 60

Query: 61  FARNVAGNGRCFSVASSSSVHDVVNDLPRLSFAPKDVVLYQYEACPFCNKVKAFLDYYNV 120
           F RNVAGNGRCFSVASSSSVHDVVNDLPRLSFAPKDVVLYQYEACPFCNKVKAFLDYYNV
Sbjct: 61  FVRNVAGNGRCFSVASSSSVHDVVNDLPRLSFAPKDVVLYQYEACPFCNKVKAFLDYYNV 120

Query: 121 PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDST 158
           PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDST
Sbjct: 121 PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDST 157

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BLAST of Carg03982-RA vs. NCBI nr
Match: XP_022951333.1 (prostaglandin E synthase 2-like [Cucurbita moschata])

HSP 1 Score: 305.1 bits (780), Expect = 1.7e-79
Identity = 152/157 (96.82%), Postives = 152/157 (96.82%), Query Frame = 0


Query: 1   MRRINGVRVLSRIVSGEANTATVTADRRLLHPSAVHRTFIGSDIRCFSQAKNPFGLYCPS 60
           MRRINGVRVLSRIVSGEANTATVTADRRLLHPSAVHR    SDIRCFSQ KNPFGLYCPS
Sbjct: 1   MRRINGVRVLSRIVSGEANTATVTADRRLLHPSAVHR----SDIRCFSQGKNPFGLYCPS 60

Query: 61  FARNVAGNGRCFSVASSSSVHDVVNDLPRLSFAPKDVVLYQYEACPFCNKVKAFLDYYNV 120
           FARNVAGNGRCFSVASSSSVHDVVNDLPRLSFAPKDVVLYQYEACPFCNKVKAFLDYYNV
Sbjct: 61  FARNVAGNGRCFSVASSSSVHDVVNDLPRLSFAPKDVVLYQYEACPFCNKVKAFLDYYNV 120

Query: 121 PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDST 158
           PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDST
Sbjct: 121 PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDST 153

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BLAST of Carg03982-RA vs. NCBI nr
Match: XP_022144146.1 (prostaglandin E synthase 2-like [Momordica charantia])

HSP 1 Score: 243.0 bits (619), Expect = 7.8e-61
Identity = 124/157 (78.98%), Postives = 132/157 (84.08%), Query Frame = 0


Query: 1   MRRINGVRVLSRIVSGEANTATVTADRRLLHPSAVHRTFIGSDIRCFSQAKNPFGLYCPS 60
           MRRINGV +LSRIVSG+A TA     R LL  SAVHRT  GSDIRCF Q  +PFGLY  S
Sbjct: 1   MRRINGVHLLSRIVSGDATTANY---RPLLRQSAVHRTRSGSDIRCFLQGVSPFGLYDLS 60

Query: 61  FARNVAGNGRCFSVASSSSVHDVVNDLPRLSFAPKDVVLYQYEACPFCNKVKAFLDYYNV 120
           F RNVAGN RCFSVASSS + +VV+D PR SF PK+VVLYQYEACPFCNKVKAFLDYYN+
Sbjct: 61  FVRNVAGNSRCFSVASSSMLQEVVHDPPRSSFVPKEVVLYQYEACPFCNKVKAFLDYYNI 120

Query: 121 PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDST 158
           PYKVVEVNPIFKKEIKWS YKKVPILMVDGVQMVDST
Sbjct: 121 PYKVVEVNPIFKKEIKWSAYKKVPILMVDGVQMVDST 154

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BLAST of Carg03982-RA vs. TAIR10
Match: AT5G42150.1 (Glutathione S-transferase family protein)

HSP 1 Score: 128.6 bits (322), Expect = 3.9e-30
Identity = 81/163 (49.69%), Postives = 99/163 (60.74%), Query Frame = 0


Query: 1   MRRINGVRVLSRIVSGEANTATVTADRRLLHPSAVHRTFIGSDIRCFSQAKNPFGLYCPS 60
           MRR+ G  + +R +S     ++V  + RL    A+  T I S      +      +  PS
Sbjct: 1   MRRVTG--LAARTIS-----SSVAINSRLTQSMAI--TTISSSEPISRRFGGLPEIKTPS 60

Query: 61  FARNVAGNGRCFSVASSSSVHDVVNDLPRLSFAPKDVVLYQYEACPFCNKVKAFLDYYNV 120
           FA  VAG     + A SS   +V        F PK+VVLYQYEACPFCNKVKAFLDY  +
Sbjct: 61  FAGGVAGVVFFSAAAVSSLGQEVHAKEMAQKFNPKEVVLYQYEACPFCNKVKAFLDYNKI 120

Query: 121 PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDSTGSVKSV 164
           PYKVVEVNPI KKEIKWS+YKKVPIL VDG QMVDS+  + S+
Sbjct: 121 PYKVVEVNPISKKEIKWSDYKKVPILTVDGEQMVDSSVIIDSL 154

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BLAST of Carg03982-RA vs. Swiss-Prot
Match: sp|Q7ZUC7|PGES2_DANRE (Prostaglandin E synthase 2 OS=Danio rerio OX=7955 GN=ptges2 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.9e-18
Identity = 41/71 (57.75%), Postives = 60/71 (84.51%), Query Frame = 0


Query: 97  VVLYQYEACPFCNKVKAFLDYYNVPYKVVEVNPIFKKEIKWSEYKKVPILMVDG-VQMVD 156
           + LYQY+ CPFC+KV+AFLDY+ +PY++VEVNP+ ++EIKWS Y+KVPILMV+G VQ+ D
Sbjct: 107 LTLYQYKTCPFCSKVRAFLDYHRLPYEIVEVNPVMRQEIKWSTYRKVPILMVNGTVQLND 166

Query: 157 STGSVKSVITW 167
           S+  + ++ T+
Sbjct: 167 SSVIISALKTY 177

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BLAST of Carg03982-RA vs. Swiss-Prot
Match: sp|Q8BWM0|PGES2_MOUSE (Prostaglandin E synthase 2 OS=Mus musculus OX=10090 GN=Ptges2 PE=1 SV=3)

HSP 1 Score: 79.7 bits (195), Expect = 3.7e-14
Identity = 35/71 (49.30%), Postives = 55/71 (77.46%), Query Frame = 0


Query: 97  VVLYQYEACPFCNKVKAFLDYYNVPYKVVEVNPIFKKEIKWSEYKKVPILMV---DGVQM 156
           + LYQY+ CPFC+KV+AFLD++++PY+VVEVNP+ + EIK+S Y+KVPIL+    D +Q 
Sbjct: 101 LTLYQYKTCPFCSKVRAFLDFHSLPYQVVEVNPVRRTEIKFSSYRKVPILVAQEGDSLQQ 160

Query: 157 VDSTGSVKSVI 165
           ++ +  + S +
Sbjct: 161 LNDSSVIISAL 171

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BLAST of Carg03982-RA vs. Swiss-Prot
Match: sp|Q9N0A4|PGES2_MACFA (Prostaglandin E synthase 2 OS=Macaca fascicularis OX=9541 GN=PTGES2 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 8.3e-14
Identity = 36/74 (48.65%), Postives = 55/74 (74.32%), Query Frame = 0


Query: 97  VVLYQYEACPFCNKVKAFLDYYNVPYKVVEVNPIFKKEIKWSEYKKVPILMV----DGVQ 156
           + LYQY+ CPFC+KV+AFLD++ +PY+VVEVNP+ + EIK+S Y+KVPIL+        Q
Sbjct: 102 LTLYQYKTCPFCSKVRAFLDFHALPYQVVEVNPVLRAEIKFSSYRKVPILVAQEGESSQQ 161

Query: 157 MVDSTGSVKSVITW 167
           + DS+  + ++ T+
Sbjct: 162 LNDSSVIISALKTY 175

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BLAST of Carg03982-RA vs. Swiss-Prot
Match: sp|Q66LN0|PGES2_BOVIN (Prostaglandin E synthase 2 OS=Bos taurus OX=9913 GN=PTGES2 PE=1 SV=3)

HSP 1 Score: 77.4 bits (189), Expect = 1.8e-13
Identity = 34/71 (47.89%), Postives = 54/71 (76.06%), Query Frame = 0


Query: 97  VVLYQYEACPFCNKVKAFLDYYNVPYKVVEVNPIFKKEIKWSEYKKVPILMV---DGVQM 156
           + LYQY+ CPFC+KV+AFLD++ +PY+VVEVNP+ + EIK+S Y+KVPI+M    + +Q 
Sbjct: 99  LTLYQYKTCPFCSKVRAFLDFHALPYQVVEVNPVRRAEIKFSSYRKVPIVMAQEGESLQQ 158

Query: 157 VDSTGSVKSVI 165
           ++ +  + S +
Sbjct: 159 LNDSSVIISAL 169

[Close]

BLAST of Carg03982-RA vs. Swiss-Prot
Match: sp|Q9H7Z7|PGES2_HUMAN (Prostaglandin E synthase 2 OS=Homo sapiens OX=9606 GN=PTGES2 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.8e-13
Identity = 36/74 (48.65%), Postives = 55/74 (74.32%), Query Frame = 0


Query: 97  VVLYQYEACPFCNKVKAFLDYYNVPYKVVEVNPIFKKEIKWSEYKKVPILMV----DGVQ 156
           + LYQY+ CPFC+KV+AFLD++ +PY+VVEVNP+ + EIK+S Y+KVPIL+        Q
Sbjct: 102 LTLYQYKTCPFCSKVRAFLDFHALPYQVVEVNPVRRAEIKFSSYRKVPILVAQEGESSQQ 161

Query: 157 MVDSTGSVKSVITW 167
           + DS+  + ++ T+
Sbjct: 162 LNDSSVIISALKTY 175

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BLAST of Carg03982-RA vs. TrEMBL
Match: tr|A0A1S3BDA9|A0A1S3BDA9_CUCME (prostaglandin E synthase 2-like OS=Cucumis melo OX=3656 GN=LOC103488396 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 3.1e-58
Identity = 121/157 (77.07%), Postives = 127/157 (80.89%), Query Frame = 0


Query: 1   MRRINGVRVLSRIVSGEANTATVTADRRLLHPSAVHRTFIGSDIRCFSQAKNPFGLYCPS 60
           MRRINGV +L R+VSG+A T T T  R+LL  SAV RT  GS+IRCFSQ  NPFG Y PS
Sbjct: 1   MRRINGVHLLGRLVSGDATTTTSTY-RQLLRQSAVLRTCTGSNIRCFSQVANPFGSYDPS 60

Query: 61  FARNVAGNGRCFSVASSSSVHDVVNDLPRLSFAPKDVVLYQYEACPFCNKVKAFLDYYNV 120
             R VAGN R  SV SSS   D+VN  PR SF PKDVVLYQYEACPFCNKVKAFLDYYNV
Sbjct: 61  SVRKVAGNARFVSVTSSSLAEDLVNGSPRPSFVPKDVVLYQYEACPFCNKVKAFLDYYNV 120

Query: 121 PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDST 158
           PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDST
Sbjct: 121 PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDST 156

[Close]

BLAST of Carg03982-RA vs. TrEMBL
Match: tr|A0A0A0LQG8|A0A0A0LQG8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G345970 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 9.1e-58
Identity = 120/163 (73.62%), Postives = 130/163 (79.75%), Query Frame = 0


Query: 1   MRRINGVRVLSRIVSGEANTATVTADRRLLHPSAVHRTFIGSDIRCFSQAKNPFGLYCPS 60
           MR+INGV +LSR+VS +A T T    R+LL  SAV RT  GS+IRCFSQ  NPFG Y PS
Sbjct: 1   MRKINGVHLLSRLVSADATTTTTY--RQLLRQSAVLRTCTGSNIRCFSQVANPFGSYDPS 60

Query: 61  FARNVAGNGRCFSVASSSSVHDVVNDLPRLSFAPKDVVLYQYEACPFCNKVKAFLDYYNV 120
             R VAGN R  SVASSS   D+VN  PR SF PKDVVLYQYEACPFCNKVKAFLDYYNV
Sbjct: 61  SVRKVAGNARFVSVASSSLAEDLVNGSPRPSFVPKDVVLYQYEACPFCNKVKAFLDYYNV 120

Query: 121 PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDSTGSVKSV 164
           PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDST  + ++
Sbjct: 121 PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDSTDIIHNL 161

[Close]

BLAST of Carg03982-RA vs. TrEMBL
Match: tr|B9H508|B9H508_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G242500v3 PE=4 SV=2)

HSP 1 Score: 154.8 bits (390), Expect = 1.8e-34
Identity = 89/163 (54.60%), Postives = 109/163 (66.87%), Query Frame = 0


Query: 1   MRRINGVRVLSRIVSGEANTATVTADRRLLHPSAVHRTFIGSDIRCF-SQAKNPFGLYCP 60
           MRR+N +  LSR  SG A      + +RL+  +A+  T+  S+ +CF S+    F +  P
Sbjct: 1   MRRVNHLATLSRAFSGAA------SHQRLVQGAAMISTYAASNSQCFASRIAESFRISNP 60

Query: 61  SFARNVAGNGRCFSVASSSSVHDV-VNDLPRL-SFAPKDVVLYQYEACPFCNKVKAFLDY 120
             AR V G    FSVA+SS   +    + P +    PKDVVLYQYEACPFCNKVKAFLDY
Sbjct: 61  PVARGVTGT-MFFSVAASSLAQEAQAKEAPPVEKLMPKDVVLYQYEACPFCNKVKAFLDY 120

Query: 121 YNVPYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDSTGSV 161
           YN+PYKVVEVNPI KKEIKWS+YKKVPIL +DG QMVDS+  V
Sbjct: 121 YNIPYKVVEVNPINKKEIKWSDYKKVPILKIDGEQMVDSSDIV 156

[Close]

BLAST of Carg03982-RA vs. TrEMBL
Match: tr|A0A2C9TZN0|A0A2C9TZN0_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_18G011100 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.3e-32
Identity = 87/165 (52.73%), Postives = 107/165 (64.85%), Query Frame = 0


Query: 1   MRRINGVRVLSRIVSGEANTATVTADRRLLHPSAVHRTFIGSDIRCFSQAKNPFGLYCPS 60
           MRR+NG+  + R V+  A +A  T  R  +  +A+  T   +D     +  + FG+  PS
Sbjct: 1   MRRVNGLVTVIRTVA--AASAAGTTARHRVFQAAMMSTCASTD--SSQRIADRFGISSPS 60

Query: 61  FARNVAGNGRCFSVASSSSVHDV--VNDLPRLSFAPKDVVLYQYEACPFCNKVKAFLDYY 120
            A  VAG    FSVA+SS   +V      P   F PKDVVLYQYEACPFCNKVKAFLDYY
Sbjct: 61  VAHGVAGT-MFFSVAASSLEQEVHAKEAPPAEKFLPKDVVLYQYEACPFCNKVKAFLDYY 120

Query: 121 NVPYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDSTGSVKSV 164
           ++PYK+VEVNPI KKEIKWS YKKVPIL VDG QMVDS+  +  +
Sbjct: 121 SIPYKIVEVNPISKKEIKWSNYKKVPILTVDGEQMVDSSDIINKL 160

[Close]

BLAST of Carg03982-RA vs. TrEMBL
Match: tr|A0A1U8JG19|A0A1U8JG19_GOSHI (prostaglandin E synthase 2-like isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC107905528 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.2e-32
Identity = 89/162 (54.94%), Postives = 108/162 (66.67%), Query Frame = 0


Query: 1   MRRINGVRVLSRIVSGEANTATVTADRRLLHPSAVHRTFIGSDI--RCFSQ-AKNPFGLY 60
           MRR+NG+ ++ R +     T     ++RL   +A+  T   S +    FSQ   +  GL 
Sbjct: 1   MRRVNGLAIVGRTL-----TCGGAVEKRLAQ-AALMSTCSSSSLNSHIFSQKLADRLGLS 60

Query: 61  CPSFARNVAGNGRCFSVASSSSVHD-VVNDLPRL-SFAPKDVVLYQYEACPFCNKVKAFL 120
            PS  R VAG    FSVA+SS   D +  + PR   F PK+VVLYQYEACPFCNKVKAFL
Sbjct: 61  RPSLVRRVAGT-MLFSVAASSLAQDALAKEKPRSEKFLPKEVVLYQYEACPFCNKVKAFL 120

Query: 121 DYYNVPYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDST 158
           DYYN+PYK+VEVNPI KKEIKWS+YKKVPIL VDG QMVDS+
Sbjct: 121 DYYNIPYKIVEVNPISKKEIKWSDYKKVPILKVDGEQMVDSS 155

The following BLAST results are available for this feature:

BLAST of Carg03982-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023537861.1	1.1e-83	99.36	uncharacterized protein LOC111798767 [Cucurbita pepo subsp. pepo]	[more]
XP_023536773.1	1.2e-82	98.73	prostaglandin E synthase 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_023002430.1	2.7e-82	98.09	prostaglandin E synthase 2-like [Cucurbita maxima]	[more]
XP_022951333.1	1.7e-79	96.82	prostaglandin E synthase 2-like [Cucurbita moschata]	[more]
XP_022144146.1	7.8e-61	78.98	prostaglandin E synthase 2-like [Momordica charantia]	[more]

BLAST of Carg03982-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT5G42150.1	3.9e-30	49.69	Glutathione S-transferase family protein	[more]

BLAST of Carg03982-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q7ZUC7\|PGES2_DANRE	1.9e-18	57.75	Prostaglandin E synthase 2 OS=Danio rerio OX=7955 GN=ptges2 PE=2 SV=1	[more]
sp\|Q8BWM0\|PGES2_MOUSE	3.7e-14	49.30	Prostaglandin E synthase 2 OS=Mus musculus OX=10090 GN=Ptges2 PE=1 SV=3	[more]
sp\|Q9N0A4\|PGES2_MACFA	8.3e-14	48.65	Prostaglandin E synthase 2 OS=Macaca fascicularis OX=9541 GN=PTGES2 PE=1 SV=1	[more]
sp\|Q66LN0\|PGES2_BOVIN	1.8e-13	47.89	Prostaglandin E synthase 2 OS=Bos taurus OX=9913 GN=PTGES2 PE=1 SV=3	[more]
sp\|Q9H7Z7\|PGES2_HUMAN	1.8e-13	48.65	Prostaglandin E synthase 2 OS=Homo sapiens OX=9606 GN=PTGES2 PE=1 SV=1	[more]

BLAST of Carg03982-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BDA9\|A0A1S3BDA9_CUCME	3.1e-58	77.07	prostaglandin E synthase 2-like OS=Cucumis melo OX=3656 GN=LOC103488396 PE=4 SV=...	[more]
tr\|A0A0A0LQG8\|A0A0A0LQG8_CUCSA	9.1e-58	73.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G345970 PE=4 SV=1	[more]
tr\|B9H508\|B9H508_POPTR	1.8e-34	54.60	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G242500v3 PE=...	[more]
tr\|A0A2C9TZN0\|A0A2C9TZN0_MANES	1.3e-32	52.73	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_18G011100 PE=4 SV=...	[more]
tr\|A0A1U8JG19\|A0A1U8JG19_GOSHI	2.2e-32	54.94	prostaglandin E synthase 2-like isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC1...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity
GO:0015035	protein disulfide oxidoreductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0045454	cell redox homeostasis

Vocabulary: **INTERPRO**
Term	Definition
IPR036249	Thioredoxin-like_sf
IPR011767	GLR_AS
IPR002109	Glutaredoxin

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0015035	protein disulfide oxidoreductase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg03982	Carg03982	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg03982-RA	Carg03982-RA-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg03982-RA.three_prime_UTR.4	Carg03982-RA.three_prime_UTR.4	three_prime_UTR
Carg03982-RA.three_prime_UTR.3	Carg03982-RA.three_prime_UTR.3	three_prime_UTR
Carg03982-RA.three_prime_UTR.2	Carg03982-RA.three_prime_UTR.2	three_prime_UTR
Carg03982-RA.three_prime_UTR.1	Carg03982-RA.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg03982-RA.CDS.2	Carg03982-RA.CDS.2	CDS
Carg03982-RA.CDS.1	Carg03982-RA.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg03982-RA.five_prime_UTR.1	Carg03982-RA.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg03982-RA.exon.5	Carg03982-RA.exon.5	exon
Carg03982-RA.exon.4	Carg03982-RA.exon.4	exon
Carg03982-RA.exon.3	Carg03982-RA.exon.3	exon
Carg03982-RA.exon.2	Carg03982-RA.exon.2	exon
Carg03982-RA.exon.1	Carg03982-RA.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 97..151 e-value: 3.7E-12 score: 46.2
IPR002109	Glutaredoxin	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 85..184 score: 11.471
None	No IPR available	GENE3D	G3DSA:3.40.30.10		coord: 90..169 e-value: 2.8E-29 score: 102.6
None	No IPR available	PANTHER	PTHR12782	MICROSOMAL PROSTAGLANDIN E SYNTHASE-2	coord: 17..164
None	No IPR available	PANTHER	PTHR12782:SF8	GLUTATHIONE S-TRANSFERASE FAMILY PROTEIN	coord: 17..164
IPR011767	Glutaredoxin active site	PROSITE	PS00195	GLUTAREDOXIN_1	coord: 99..115
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	SSF52833	Thioredoxin-like	coord: 96..157