Carg03982 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg03982
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	prostaglandin E synthase 2-like
Location	Cucurbita_argyrosperma_scaffold_011 : 1168007 .. 1170450 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTGCACTCTCCTTACATCGACGGCTGAAATCGTACCAATTTCTCTTCCCCAAACCCTTGTAAAACCTTGCAAAAGAGTTCAACTTCCAGAGAAATCTCGGTCGCCATGAGGAGGATTAATGGAGTTCGCGTACTCAGCCGGATTGTAAGCGGTGAGGCCAACACCGCCACTGTCACCGCTGATCGGCGGCTACTCCATCCATCGGCGGTTCACAGAACGTTCATTGGATCTGATATTCGGTGTTTCTCGCAAGCGAAGAATCCATTTGGTTTGTATTGTCCTTCTTTTGCTCGGAATGTTGCAGGGAATGGTCGGTGCTTCTCTGTGGCCTCTTCATCTTCGGTTCATGATGTGGTTAATGACCTACCTCGTTTGTCTTTCGCACCCAAGGATGTGGTTCTCTATCAATATGAGGCTTGCCCGTTCTGCAACAAAGTTAAAGGTAATTAGCATAATCTCTTAGAGGAATTCTCAGAATATGAAGTTTTTGTCAACTTGATCTTGATAAGAAAAATAGAGAAGGTGGATTAAGGACTGGACAATAGGCCATATATTACTGTTACCTATGAGCTGAAGCTAGAATTCTTGTCGTGAAGTTGCAATTCTATGCCATTTTTCCTTTCTAGGTCCTTAAAATTTCTGTTGATTTTCCTTTTCCTCCAGCATTCTTGGATTACTACAATGTTCCTTATAAAGTTGTGGAGGTGAATCCCATATTCAAAAAGGAGATCAAGTGGTCTGAATACAAGAAGGTTCCAATTCTGATGGTTGATGGTGTTCAAATGGTGGATTCTACAGGTTCAGTCAAATCTGTAATTACTTGGAAAATGGAGAATACATACATATATACATACATACATATATATATATACATACATATATAAATATATATATATGTTTTCAATTAGAGTAGTTGTTGATGATCGGGCCTGTCTTGCTTGTTCTTGTACAGATATAATTGATAAGTTGTACAAAAGAATTCATCCAGAGAATTCTACCTCGGACTCAGAGGAGGAGAGGAAGTGGCTTGGGTATACTTTTTTTTTTTTTTTACATCTCGAGGCTCTATACTTGCTTACAAGCAGCTATTATATGGACCCAATTGAGACTTTAAGGGAAACCAGCGTCTTCATTGACAAAGAATTTGACTGACTAATTTGTCTTTCGACATTTTTGTGTATCATATGTAACTGATTGATGAGCATATATTATGTAGATGGGTGGACAATCACCTGGTGCACGTTTTATCCCCGAACATTTACAGAAATTACAAGGAGGCTCTCGAGTCTTTCAACTACATAACTACACATGGTATGATAGTAAATCAATTTATGAGCCGTTCTTTTTTTTTTTTTTTTCCTTTAGTTCTTTGAATTATATATGAGCTGGAGACGGTTTCTAGGGCCCTGTTTGATAACAATTTGATTTTTGGTTTTTAAACGTTAAGCTGTTAATACTGTTTATCACTTGTGGGTTTATTTCTTTTCTATTTTTTTCCAATGTTTTCAAAATCCAAGCCAAGTTTGAATACTCACTTTCATTTATTTTCAATATTCACTTTATAATTTGTATTGCCTTATTCCAATTATTGTATTCATAAGAAAACATCCTCAACATGATTTTTTGTTTGTTTGTTTGTTGTTCATGTTGTTGAAGCAATCGCATATATTCGTGAGCTCCTGGCTTGTCTGTATAACTTTAATATGGTGCAGGAAATTTTAGTTTCACTCAAAGGATAATAGCCAAGTATGGCGGGGCTACAGCCATGTATTTTGTTACCAAGAAATTGAAAGAGAAACATAACATCACTGATGAACGAAAAGCCTTATATGGAGCTGCAGAAACATGGGTGGAAGCACTGAAAGACCGTCAGTTTCTTGGTATGCTTAACTTCATTCACGATTCTGTTCGGTTATTTAGGTTTCAGCTAACGGTATTTGAGAAAAACAGTTCAATTTTACGACGAATTTGTCTCTCGATAGGTGGACCAAATCCTAATTTAGCTGATCTTGCCGTCTTCGGTGTCTTGAGACCAATCCGACACCTTCAATCTGGAATAGATATGGTAGAGAATACAAGAGTTGGCGAATGGTATTCTAGAATGGAGGATGCTGTGGGAGAGTCTTCAAGGATCGTCTCTTGAAGTTGGTACAATTTATAGTTTTTGTTTCTGTATTACTCAATATCCTGCCAGTTTATTGATAAATATCTGAACTTTTTTTAACATCAGATCCTAAAAGATCGTCTGTGAGAATAATCTGCTAGATCCATGTAGCGAATTGCGAGTTTCTCATCCTTTTAGATGATTGCTTCTATATTTGTATTTAATGTGGTGATTCCTTGTTCTACTTAACTGTATTGTGAACAACCTAAATGCTATCGAAGTGTTGACAGAACATAGGTACATTCTAAAAGGATTTACTTTATGTTTTTATGAGAAACA

mRNA sequence

TCTGCACTCTCCTTACATCGACGGCTGAAATCGTACCAATTTCTCTTCCCCAAACCCTTGTAAAACCTTGCAAAAGAGTTCAACTTCCAGAGAAATCTCGGTCGCCATGAGGAGGATTAATGGAGTTCGCGTACTCAGCCGGATTGTAAGCGGTGAGGCCAACACCGCCACTGTCACCGCTGATCGGCGGCTACTCCATCCATCGGCGGTTCACAGAACGTTCATTGGATCTGATATTCGGTGTTTCTCGCAAGCGAAGAATCCATTTGGTTTGTATTGTCCTTCTTTTGCTCGGAATGTTGCAGGGAATGGTCGGTGCTTCTCTGTGGCCTCTTCATCTTCGGTTCATGATGTGGTTAATGACCTACCTCGTTTGTCTTTCGCACCCAAGGATGTGGTTCTCTATCAATATGAGGCTTGCCCGTTCTGCAACAAAGTTAAAGCATTCTTGGATTACTACAATGTTCCTTATAAAGTTGTGGAGGTGAATCCCATATTCAAAAAGGAGATCAAGTGGTCTGAATACAAGAAGGTTCCAATTCTGATGGTTGATGGTGTTCAAATGGTGGATTCTACAGGTTCAGTCAAATCTGTAATTACTTGGAAAATGGAGAATACATACATATATACATACATACATATATATATATACATACATATATAAATATATATATATGTTTTCAATTAGAGTAGTTGTTGATGATCGGGCCTGTCTTGCTTGTTCTTGTACAGATATAATTGATAAGTTGTACAAAAGAATTCATCCAGAGAATTCTACCTCGGACTCAGAGGAGGAGAGGAAGTGGCTTGGATGGGTGGACAATCACCTGGTGCACGTTTTATCCCCGAACATTTACAGAAATTACAAGGAGGCTCTCGAGTCTTTCAACTACATAACTACACATGGTATGATAGAAATTTTAGTTTCACTCAAAGGATAATAGCCAAGTATGGCGGGGCTACAGCCATGTATTTTGTTACCAAGAAATTGAAAGAGAAACATAACATCACTGATGAACGAAAAGCCTTATATGGAGCTGCAGAAACATGGGTGGAAGCACTGAAAGACCGTCAGTTTCTTGGTGGACCAAATCCTAATTTAGCTGATCTTGCCGTCTTCGGTGTCTTGAGACCAATCCGACACCTTCAATCTGGAATAGATATGGTAGAGAATACAAGAGTTGGCGAATGGTATTCTAGAATGGAGGATGCTGTGGGAGAGTCTTCAAGGATCGTCTCTTGAAGTTGGTACAATTTATAGTTTTTGTTTCTGTATTACTCAATATCCTGCCAGTTTATTGATAAATATCTGAACTTTTTTTAACATCAGATCCTAAAAGATCGTCTGTGAGAATAATCTGCTAGATCCATGTAGCGAATTGCGAGTTTCTCATCCTTTTAGATGATTGCTTCTATATTTGTATTTAATGTGGTGATTCCTTGTTCTACTTAACTGTATTGTGAACAACCTAAATGCTATCGAAGTGTTGACAGAACATAGGTACATTCTAAAAGGATTTACTTTATGTTTTTATGAGAAACA

Coding sequence (CDS)

ATGAGGAGGATTAATGGAGTTCGCGTACTCAGCCGGATTGTAAGCGGTGAGGCCAACACCGCCACTGTCACCGCTGATCGGCGGCTACTCCATCCATCGGCGGTTCACAGAACGTTCATTGGATCTGATATTCGGTGTTTCTCGCAAGCGAAGAATCCATTTGGTTTGTATTGTCCTTCTTTTGCTCGGAATGTTGCAGGGAATGGTCGGTGCTTCTCTGTGGCCTCTTCATCTTCGGTTCATGATGTGGTTAATGACCTACCTCGTTTGTCTTTCGCACCCAAGGATGTGGTTCTCTATCAATATGAGGCTTGCCCGTTCTGCAACAAAGTTAAAGCATTCTTGGATTACTACAATGTTCCTTATAAAGTTGTGGAGGTGAATCCCATATTCAAAAAGGAGATCAAGTGGTCTGAATACAAGAAGGTTCCAATTCTGATGGTTGATGGTGTTCAAATGGTGGATTCTACAGGTTCAGTCAAATCTGTAATTACTTGGAAAATGGAGAATACATACATATATACATACATACATATATATATATACATACATATATAA

Protein sequence

MRRINGVRVLSRIVSGEANTATVTADRRLLHPSAVHRTFIGSDIRCFSQAKNPFGLYCPSFARNVAGNGRCFSVASSSSVHDVVNDLPRLSFAPKDVVLYQYEACPFCNKVKAFLDYYNVPYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDSTGSVKSVITWKMENTYIYTYIHIYIYIHI

Homology

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BLAST of Carg03982 vs. NCBI nr
Match: XP_023537861.1 (uncharacterized protein LOC111798767 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 318.9 bits (816), Expect = 1.1e-83
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 1   MRRINGVRVLSRIVSGEANTATVTADRRLLHPSAVHRTFIGSDIRCFSQAKNPFGLYCPS 60
           MRRINGVRVLSR VSGEANTATVTADRRLLHPSAVHRTFIGSDIRCFSQAKNPFGLYCPS
Sbjct: 1   MRRINGVRVLSRFVSGEANTATVTADRRLLHPSAVHRTFIGSDIRCFSQAKNPFGLYCPS 60

Query: 61  FARNVAGNGRCFSVASSSSVHDVVNDLPRLSFAPKDVVLYQYEACPFCNKVKAFLDYYNV 120
           FARNVAGNGRCFSVASSSSVHDVVNDLPRLSFAPKDVVLYQYEACPFCNKVKAFLDYYNV
Sbjct: 61  FARNVAGNGRCFSVASSSSVHDVVNDLPRLSFAPKDVVLYQYEACPFCNKVKAFLDYYNV 120

Query: 121 PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDST 158
           PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDST
Sbjct: 121 PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDST 157

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BLAST of Carg03982 vs. NCBI nr
Match: XP_023536773.1 (prostaglandin E synthase 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 315.5 bits (807), Expect = 1.2e-82
Identity = 155/157 (98.73%), Postives = 155/157 (98.73%), Query Frame = 0


Query: 1   MRRINGVRVLSRIVSGEANTATVTADRRLLHPSAVHRTFIGSDIRCFSQAKNPFGLYCPS 60
           MRRINGVRVLSR VSGEANTATVTADRRLLHPSAVHRTFIGSDIRCFSQAKNPFGLYC S
Sbjct: 1   MRRINGVRVLSRFVSGEANTATVTADRRLLHPSAVHRTFIGSDIRCFSQAKNPFGLYCHS 60

Query: 61  FARNVAGNGRCFSVASSSSVHDVVNDLPRLSFAPKDVVLYQYEACPFCNKVKAFLDYYNV 120
           FARNVAGNGRCFSVASSSSVHDVVNDLPRLSFAPKDVVLYQYEACPFCNKVKAFLDYYNV
Sbjct: 61  FARNVAGNGRCFSVASSSSVHDVVNDLPRLSFAPKDVVLYQYEACPFCNKVKAFLDYYNV 120

Query: 121 PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDST 158
           PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDST
Sbjct: 121 PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDST 157

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BLAST of Carg03982 vs. NCBI nr
Match: XP_023002430.1 (prostaglandin E synthase 2-like [Cucurbita maxima])

HSP 1 Score: 314.3 bits (804), Expect = 2.7e-82
Identity = 154/157 (98.09%), Postives = 154/157 (98.09%), Query Frame = 0


Query: 1   MRRINGVRVLSRIVSGEANTATVTADRRLLHPSAVHRTFIGSDIRCFSQAKNPFGLYCPS 60
           MRRINGVRVLSRIVSGEANTATVTADRRLLHPSAVHRT IGSDIRCFSQ KNPFGLYCPS
Sbjct: 1   MRRINGVRVLSRIVSGEANTATVTADRRLLHPSAVHRTSIGSDIRCFSQGKNPFGLYCPS 60

Query: 61  FARNVAGNGRCFSVASSSSVHDVVNDLPRLSFAPKDVVLYQYEACPFCNKVKAFLDYYNV 120
           F RNVAGNGRCFSVASSSSVHDVVNDLPRLSFAPKDVVLYQYEACPFCNKVKAFLDYYNV
Sbjct: 61  FVRNVAGNGRCFSVASSSSVHDVVNDLPRLSFAPKDVVLYQYEACPFCNKVKAFLDYYNV 120

Query: 121 PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDST 158
           PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDST
Sbjct: 121 PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDST 157

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BLAST of Carg03982 vs. NCBI nr
Match: XP_022951333.1 (prostaglandin E synthase 2-like [Cucurbita moschata])

HSP 1 Score: 305.1 bits (780), Expect = 1.7e-79
Identity = 152/157 (96.82%), Postives = 152/157 (96.82%), Query Frame = 0


Query: 1   MRRINGVRVLSRIVSGEANTATVTADRRLLHPSAVHRTFIGSDIRCFSQAKNPFGLYCPS 60
           MRRINGVRVLSRIVSGEANTATVTADRRLLHPSAVHR    SDIRCFSQ KNPFGLYCPS
Sbjct: 1   MRRINGVRVLSRIVSGEANTATVTADRRLLHPSAVHR----SDIRCFSQGKNPFGLYCPS 60

Query: 61  FARNVAGNGRCFSVASSSSVHDVVNDLPRLSFAPKDVVLYQYEACPFCNKVKAFLDYYNV 120
           FARNVAGNGRCFSVASSSSVHDVVNDLPRLSFAPKDVVLYQYEACPFCNKVKAFLDYYNV
Sbjct: 61  FARNVAGNGRCFSVASSSSVHDVVNDLPRLSFAPKDVVLYQYEACPFCNKVKAFLDYYNV 120

Query: 121 PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDST 158
           PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDST
Sbjct: 121 PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDST 153

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BLAST of Carg03982 vs. NCBI nr
Match: XP_022144146.1 (prostaglandin E synthase 2-like [Momordica charantia])

HSP 1 Score: 243.0 bits (619), Expect = 7.8e-61
Identity = 124/157 (78.98%), Postives = 132/157 (84.08%), Query Frame = 0


Query: 1   MRRINGVRVLSRIVSGEANTATVTADRRLLHPSAVHRTFIGSDIRCFSQAKNPFGLYCPS 60
           MRRINGV +LSRIVSG+A TA     R LL  SAVHRT  GSDIRCF Q  +PFGLY  S
Sbjct: 1   MRRINGVHLLSRIVSGDATTANY---RPLLRQSAVHRTRSGSDIRCFLQGVSPFGLYDLS 60

Query: 61  FARNVAGNGRCFSVASSSSVHDVVNDLPRLSFAPKDVVLYQYEACPFCNKVKAFLDYYNV 120
           F RNVAGN RCFSVASSS + +VV+D PR SF PK+VVLYQYEACPFCNKVKAFLDYYN+
Sbjct: 61  FVRNVAGNSRCFSVASSSMLQEVVHDPPRSSFVPKEVVLYQYEACPFCNKVKAFLDYYNI 120

Query: 121 PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDST 158
           PYKVVEVNPIFKKEIKWS YKKVPILMVDGVQMVDST
Sbjct: 121 PYKVVEVNPIFKKEIKWSAYKKVPILMVDGVQMVDST 154

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BLAST of Carg03982 vs. TAIR10
Match: AT5G42150.1 (Glutathione S-transferase family protein)

HSP 1 Score: 128.6 bits (322), Expect = 3.9e-30
Identity = 81/163 (49.69%), Postives = 99/163 (60.74%), Query Frame = 0


Query: 1   MRRINGVRVLSRIVSGEANTATVTADRRLLHPSAVHRTFIGSDIRCFSQAKNPFGLYCPS 60
           MRR+ G  + +R +S     ++V  + RL    A+  T I S      +      +  PS
Sbjct: 1   MRRVTG--LAARTIS-----SSVAINSRLTQSMAI--TTISSSEPISRRFGGLPEIKTPS 60

Query: 61  FARNVAGNGRCFSVASSSSVHDVVNDLPRLSFAPKDVVLYQYEACPFCNKVKAFLDYYNV 120
           FA  VAG     + A SS   +V        F PK+VVLYQYEACPFCNKVKAFLDY  +
Sbjct: 61  FAGGVAGVVFFSAAAVSSLGQEVHAKEMAQKFNPKEVVLYQYEACPFCNKVKAFLDYNKI 120

Query: 121 PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDSTGSVKSV 164
           PYKVVEVNPI KKEIKWS+YKKVPIL VDG QMVDS+  + S+
Sbjct: 121 PYKVVEVNPISKKEIKWSDYKKVPILTVDGEQMVDSSVIIDSL 154

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BLAST of Carg03982 vs. Swiss-Prot
Match: sp|Q7ZUC7|PGES2_DANRE (Prostaglandin E synthase 2 OS=Danio rerio OX=7955 GN=ptges2 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.9e-18
Identity = 41/71 (57.75%), Postives = 60/71 (84.51%), Query Frame = 0


Query: 97  VVLYQYEACPFCNKVKAFLDYYNVPYKVVEVNPIFKKEIKWSEYKKVPILMVDG-VQMVD 156
           + LYQY+ CPFC+KV+AFLDY+ +PY++VEVNP+ ++EIKWS Y+KVPILMV+G VQ+ D
Sbjct: 107 LTLYQYKTCPFCSKVRAFLDYHRLPYEIVEVNPVMRQEIKWSTYRKVPILMVNGTVQLND 166

Query: 157 STGSVKSVITW 167
           S+  + ++ T+
Sbjct: 167 SSVIISALKTY 177

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BLAST of Carg03982 vs. Swiss-Prot
Match: sp|Q8BWM0|PGES2_MOUSE (Prostaglandin E synthase 2 OS=Mus musculus OX=10090 GN=Ptges2 PE=1 SV=3)

HSP 1 Score: 79.7 bits (195), Expect = 3.7e-14
Identity = 35/71 (49.30%), Postives = 55/71 (77.46%), Query Frame = 0


Query: 97  VVLYQYEACPFCNKVKAFLDYYNVPYKVVEVNPIFKKEIKWSEYKKVPILMV---DGVQM 156
           + LYQY+ CPFC+KV+AFLD++++PY+VVEVNP+ + EIK+S Y+KVPIL+    D +Q 
Sbjct: 101 LTLYQYKTCPFCSKVRAFLDFHSLPYQVVEVNPVRRTEIKFSSYRKVPILVAQEGDSLQQ 160

Query: 157 VDSTGSVKSVI 165
           ++ +  + S +
Sbjct: 161 LNDSSVIISAL 171

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BLAST of Carg03982 vs. Swiss-Prot
Match: sp|Q9N0A4|PGES2_MACFA (Prostaglandin E synthase 2 OS=Macaca fascicularis OX=9541 GN=PTGES2 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 8.3e-14
Identity = 36/74 (48.65%), Postives = 55/74 (74.32%), Query Frame = 0


Query: 97  VVLYQYEACPFCNKVKAFLDYYNVPYKVVEVNPIFKKEIKWSEYKKVPILMV----DGVQ 156
           + LYQY+ CPFC+KV+AFLD++ +PY+VVEVNP+ + EIK+S Y+KVPIL+        Q
Sbjct: 102 LTLYQYKTCPFCSKVRAFLDFHALPYQVVEVNPVLRAEIKFSSYRKVPILVAQEGESSQQ 161

Query: 157 MVDSTGSVKSVITW 167
           + DS+  + ++ T+
Sbjct: 162 LNDSSVIISALKTY 175

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BLAST of Carg03982 vs. Swiss-Prot
Match: sp|Q66LN0|PGES2_BOVIN (Prostaglandin E synthase 2 OS=Bos taurus OX=9913 GN=PTGES2 PE=1 SV=3)

HSP 1 Score: 77.4 bits (189), Expect = 1.8e-13
Identity = 34/71 (47.89%), Postives = 54/71 (76.06%), Query Frame = 0


Query: 97  VVLYQYEACPFCNKVKAFLDYYNVPYKVVEVNPIFKKEIKWSEYKKVPILMV---DGVQM 156
           + LYQY+ CPFC+KV+AFLD++ +PY+VVEVNP+ + EIK+S Y+KVPI+M    + +Q 
Sbjct: 99  LTLYQYKTCPFCSKVRAFLDFHALPYQVVEVNPVRRAEIKFSSYRKVPIVMAQEGESLQQ 158

Query: 157 VDSTGSVKSVI 165
           ++ +  + S +
Sbjct: 159 LNDSSVIISAL 169

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BLAST of Carg03982 vs. Swiss-Prot
Match: sp|Q9H7Z7|PGES2_HUMAN (Prostaglandin E synthase 2 OS=Homo sapiens OX=9606 GN=PTGES2 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.8e-13
Identity = 36/74 (48.65%), Postives = 55/74 (74.32%), Query Frame = 0


Query: 97  VVLYQYEACPFCNKVKAFLDYYNVPYKVVEVNPIFKKEIKWSEYKKVPILMV----DGVQ 156
           + LYQY+ CPFC+KV+AFLD++ +PY+VVEVNP+ + EIK+S Y+KVPIL+        Q
Sbjct: 102 LTLYQYKTCPFCSKVRAFLDFHALPYQVVEVNPVRRAEIKFSSYRKVPILVAQEGESSQQ 161

Query: 157 MVDSTGSVKSVITW 167
           + DS+  + ++ T+
Sbjct: 162 LNDSSVIISALKTY 175

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BLAST of Carg03982 vs. TrEMBL
Match: tr|A0A1S3BDA9|A0A1S3BDA9_CUCME (prostaglandin E synthase 2-like OS=Cucumis melo OX=3656 GN=LOC103488396 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 3.1e-58
Identity = 121/157 (77.07%), Postives = 127/157 (80.89%), Query Frame = 0


Query: 1   MRRINGVRVLSRIVSGEANTATVTADRRLLHPSAVHRTFIGSDIRCFSQAKNPFGLYCPS 60
           MRRINGV +L R+VSG+A T T T  R+LL  SAV RT  GS+IRCFSQ  NPFG Y PS
Sbjct: 1   MRRINGVHLLGRLVSGDATTTTSTY-RQLLRQSAVLRTCTGSNIRCFSQVANPFGSYDPS 60

Query: 61  FARNVAGNGRCFSVASSSSVHDVVNDLPRLSFAPKDVVLYQYEACPFCNKVKAFLDYYNV 120
             R VAGN R  SV SSS   D+VN  PR SF PKDVVLYQYEACPFCNKVKAFLDYYNV
Sbjct: 61  SVRKVAGNARFVSVTSSSLAEDLVNGSPRPSFVPKDVVLYQYEACPFCNKVKAFLDYYNV 120

Query: 121 PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDST 158
           PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDST
Sbjct: 121 PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDST 156

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BLAST of Carg03982 vs. TrEMBL
Match: tr|A0A0A0LQG8|A0A0A0LQG8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G345970 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 9.1e-58
Identity = 120/163 (73.62%), Postives = 130/163 (79.75%), Query Frame = 0


Query: 1   MRRINGVRVLSRIVSGEANTATVTADRRLLHPSAVHRTFIGSDIRCFSQAKNPFGLYCPS 60
           MR+INGV +LSR+VS +A T T    R+LL  SAV RT  GS+IRCFSQ  NPFG Y PS
Sbjct: 1   MRKINGVHLLSRLVSADATTTTTY--RQLLRQSAVLRTCTGSNIRCFSQVANPFGSYDPS 60

Query: 61  FARNVAGNGRCFSVASSSSVHDVVNDLPRLSFAPKDVVLYQYEACPFCNKVKAFLDYYNV 120
             R VAGN R  SVASSS   D+VN  PR SF PKDVVLYQYEACPFCNKVKAFLDYYNV
Sbjct: 61  SVRKVAGNARFVSVASSSLAEDLVNGSPRPSFVPKDVVLYQYEACPFCNKVKAFLDYYNV 120

Query: 121 PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDSTGSVKSV 164
           PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDST  + ++
Sbjct: 121 PYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDSTDIIHNL 161

[Close]

BLAST of Carg03982 vs. TrEMBL
Match: tr|B9H508|B9H508_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G242500v3 PE=4 SV=2)

HSP 1 Score: 154.8 bits (390), Expect = 1.8e-34
Identity = 89/163 (54.60%), Postives = 109/163 (66.87%), Query Frame = 0


Query: 1   MRRINGVRVLSRIVSGEANTATVTADRRLLHPSAVHRTFIGSDIRCF-SQAKNPFGLYCP 60
           MRR+N +  LSR  SG A      + +RL+  +A+  T+  S+ +CF S+    F +  P
Sbjct: 1   MRRVNHLATLSRAFSGAA------SHQRLVQGAAMISTYAASNSQCFASRIAESFRISNP 60

Query: 61  SFARNVAGNGRCFSVASSSSVHDV-VNDLPRL-SFAPKDVVLYQYEACPFCNKVKAFLDY 120
             AR V G    FSVA+SS   +    + P +    PKDVVLYQYEACPFCNKVKAFLDY
Sbjct: 61  PVARGVTGT-MFFSVAASSLAQEAQAKEAPPVEKLMPKDVVLYQYEACPFCNKVKAFLDY 120

Query: 121 YNVPYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDSTGSV 161
           YN+PYKVVEVNPI KKEIKWS+YKKVPIL +DG QMVDS+  V
Sbjct: 121 YNIPYKVVEVNPINKKEIKWSDYKKVPILKIDGEQMVDSSDIV 156

[Close]

BLAST of Carg03982 vs. TrEMBL
Match: tr|A0A2C9TZN0|A0A2C9TZN0_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_18G011100 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.3e-32
Identity = 87/165 (52.73%), Postives = 107/165 (64.85%), Query Frame = 0


Query: 1   MRRINGVRVLSRIVSGEANTATVTADRRLLHPSAVHRTFIGSDIRCFSQAKNPFGLYCPS 60
           MRR+NG+  + R V+  A +A  T  R  +  +A+  T   +D     +  + FG+  PS
Sbjct: 1   MRRVNGLVTVIRTVA--AASAAGTTARHRVFQAAMMSTCASTD--SSQRIADRFGISSPS 60

Query: 61  FARNVAGNGRCFSVASSSSVHDV--VNDLPRLSFAPKDVVLYQYEACPFCNKVKAFLDYY 120
            A  VAG    FSVA+SS   +V      P   F PKDVVLYQYEACPFCNKVKAFLDYY
Sbjct: 61  VAHGVAGT-MFFSVAASSLEQEVHAKEAPPAEKFLPKDVVLYQYEACPFCNKVKAFLDYY 120

Query: 121 NVPYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDSTGSVKSV 164
           ++PYK+VEVNPI KKEIKWS YKKVPIL VDG QMVDS+  +  +
Sbjct: 121 SIPYKIVEVNPISKKEIKWSNYKKVPILTVDGEQMVDSSDIINKL 160

[Close]

BLAST of Carg03982 vs. TrEMBL
Match: tr|A0A1U8JG19|A0A1U8JG19_GOSHI (prostaglandin E synthase 2-like isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC107905528 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.2e-32
Identity = 89/162 (54.94%), Postives = 108/162 (66.67%), Query Frame = 0


Query: 1   MRRINGVRVLSRIVSGEANTATVTADRRLLHPSAVHRTFIGSDI--RCFSQ-AKNPFGLY 60
           MRR+NG+ ++ R +     T     ++RL   +A+  T   S +    FSQ   +  GL 
Sbjct: 1   MRRVNGLAIVGRTL-----TCGGAVEKRLAQ-AALMSTCSSSSLNSHIFSQKLADRLGLS 60

Query: 61  CPSFARNVAGNGRCFSVASSSSVHD-VVNDLPRL-SFAPKDVVLYQYEACPFCNKVKAFL 120
            PS  R VAG    FSVA+SS   D +  + PR   F PK+VVLYQYEACPFCNKVKAFL
Sbjct: 61  RPSLVRRVAGT-MLFSVAASSLAQDALAKEKPRSEKFLPKEVVLYQYEACPFCNKVKAFL 120

Query: 121 DYYNVPYKVVEVNPIFKKEIKWSEYKKVPILMVDGVQMVDST 158
           DYYN+PYK+VEVNPI KKEIKWS+YKKVPIL VDG QMVDS+
Sbjct: 121 DYYNIPYKIVEVNPISKKEIKWSDYKKVPILKVDGEQMVDSS 155

The following BLAST results are available for this feature:

BLAST of Carg03982 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023537861.1	1.1e-83	99.36	uncharacterized protein LOC111798767 [Cucurbita pepo subsp. pepo]	[more]
XP_023536773.1	1.2e-82	98.73	prostaglandin E synthase 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_023002430.1	2.7e-82	98.09	prostaglandin E synthase 2-like [Cucurbita maxima]	[more]
XP_022951333.1	1.7e-79	96.82	prostaglandin E synthase 2-like [Cucurbita moschata]	[more]
XP_022144146.1	7.8e-61	78.98	prostaglandin E synthase 2-like [Momordica charantia]	[more]

BLAST of Carg03982 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G42150.1	3.9e-30	49.69	Glutathione S-transferase family protein	[more]

BLAST of Carg03982 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q7ZUC7\|PGES2_DANRE	1.9e-18	57.75	Prostaglandin E synthase 2 OS=Danio rerio OX=7955 GN=ptges2 PE=2 SV=1	[more]
sp\|Q8BWM0\|PGES2_MOUSE	3.7e-14	49.30	Prostaglandin E synthase 2 OS=Mus musculus OX=10090 GN=Ptges2 PE=1 SV=3	[more]
sp\|Q9N0A4\|PGES2_MACFA	8.3e-14	48.65	Prostaglandin E synthase 2 OS=Macaca fascicularis OX=9541 GN=PTGES2 PE=1 SV=1	[more]
sp\|Q66LN0\|PGES2_BOVIN	1.8e-13	47.89	Prostaglandin E synthase 2 OS=Bos taurus OX=9913 GN=PTGES2 PE=1 SV=3	[more]
sp\|Q9H7Z7\|PGES2_HUMAN	1.8e-13	48.65	Prostaglandin E synthase 2 OS=Homo sapiens OX=9606 GN=PTGES2 PE=1 SV=1	[more]

BLAST of Carg03982 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BDA9\|A0A1S3BDA9_CUCME	3.1e-58	77.07	prostaglandin E synthase 2-like OS=Cucumis melo OX=3656 GN=LOC103488396 PE=4 SV=...	[more]
tr\|A0A0A0LQG8\|A0A0A0LQG8_CUCSA	9.1e-58	73.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G345970 PE=4 SV=1	[more]
tr\|B9H508\|B9H508_POPTR	1.8e-34	54.60	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G242500v3 PE=...	[more]
tr\|A0A2C9TZN0\|A0A2C9TZN0_MANES	1.3e-32	52.73	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_18G011100 PE=4 SV=...	[more]
tr\|A0A1U8JG19\|A0A1U8JG19_GOSHI	2.2e-32	54.94	prostaglandin E synthase 2-like isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC1...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity
GO:0015035	protein disulfide oxidoreductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0045454	cell redox homeostasis

Vocabulary: **INTERPRO**
Term	Definition
IPR036249	Thioredoxin-like_sf
IPR011767	GLR_AS
IPR002109	Glutaredoxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0015035	protein disulfide oxidoreductase activity
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03982-RA	Carg03982-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 97..151 e-value: 3.7E-12 score: 46.2
IPR002109	Glutaredoxin	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 85..184 score: 11.471
None	No IPR available	GENE3D	G3DSA:3.40.30.10		coord: 90..169 e-value: 2.8E-29 score: 102.6
None	No IPR available	PANTHER	PTHR12782	MICROSOMAL PROSTAGLANDIN E SYNTHASE-2	coord: 17..164
None	No IPR available	PANTHER	PTHR12782:SF8	GLUTATHIONE S-TRANSFERASE FAMILY PROTEIN	coord: 17..164
IPR011767	Glutaredoxin active site	PROSITE	PS00195	GLUTAREDOXIN_1	coord: 99..115
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	SSF52833	Thioredoxin-like	coord: 96..157

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg03982	Cla022408	Watermelon (97103) v1	carwmB0978
Carg03982	Csa2G345970	Cucumber (Chinese Long) v2	carcuB0991
Carg03982	MELO3C011352	Melon (DHL92) v3.5.1	carmeB0955
Carg03982	ClCG08G014130	Watermelon (Charleston Gray)	carwcgB0958
Carg03982	CSPI02G16730	Wild cucumber (PI 183967)	carcpiB1013
Carg03982	Cucsa.393900	Cucumber (Gy14) v1	carcgyB1101
Carg03982	CmaCh05G003200	Cucurbita maxima (Rimu)	carcmaB1357
Carg03982	CmaCh12G003970	Cucurbita maxima (Rimu)	carcmaB1349
Carg03982	CmoCh12G003480	Cucurbita moschata (Rifu)	carcmoB1310
Carg03982	Cp4.1LG11g02630	Cucurbita pepo (Zucchini)	carcpeB1352
Carg03982	Cp4.1LG07g03540	Cucurbita pepo (Zucchini)	carcpeB1368
Carg03982	CsGy2G016730	Cucumber (Gy14) v2	carcgybB0964
Carg03982	MELO3C011352.2	Melon (DHL92) v3.6.1	carmedB0961
Carg03982	CsaV3_2G024290	Cucumber (Chinese Long) v3	carcucB1019
Carg03982	Cla97C08G157700	Watermelon (97103) v2	carwmbB1034
Carg03982	Bhi04G000103	Wax gourd	carwgoB1142

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg03982	Carg09392	Silver-seed gourd	carcarB168

The following block(s) are covering this gene:


Gene	Organism	Block
Carg03982	Cucurbita moschata (Rifu)	carcmoB1317
Carg03982	Cucurbita moschata (Rifu)	carcmoB1319
Carg03982	Cucurbita moschata (Rifu)	carcmoB1321
Carg03982	Cucurbita pepo (Zucchini)	carcpeB1350
Carg03982	Cucurbita pepo (Zucchini)	carcpeB1361
Carg03982	Wild cucumber (PI 183967)	carcpiB1019
Carg03982	Cucumber (Chinese Long) v2	carcuB0996
Carg03982	Cucumber (Chinese Long) v3	carcucB1025
Carg03982	Bottle gourd (USVL1VR-Ls)	carlsiB892
Carg03982	Bottle gourd (USVL1VR-Ls)	carlsiB898
Carg03982	Melon (DHL92) v3.5.1	carmeB0952
Carg03982	Melon (DHL92) v3.5.1	carmeB0960
Carg03982	Melon (DHL92) v3.6.1	carmedB0966
Carg03982	Watermelon (Charleston Gray)	carwcgB0952
Carg03982	Watermelon (Charleston Gray)	carwcgB0953
Carg03982	Watermelon (97103) v1	carwmB0984
Carg03982	Watermelon (97103) v1	carwmB0985
Carg03982	Watermelon (97103) v2	carwmbB1028
Carg03982	Silver-seed gourd	carcarB430
Carg03982	Cucumber (Gy14) v2	carcgybB0969
Carg03982	Cucumber (Gy14) v1	carcgyB1090
Carg03982	Cucurbita maxima (Rimu)	carcmaB1355
Carg03982	Cucurbita maxima (Rimu)	carcmaB1360