Carg03940-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg03940-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Hydroxyproline O-arabinosyltransferase
Location	Cucurbita_argyrosperma_scaffold_011 : 888811 .. 889856 (-)
Sequence length	534

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCAGAAGATGGTTGCAATGGCTCGAAGATCTGAACTGGGCTGTATGGCCGACTGTTTATTTTGTGGAGTTTGTAACAATCCCAGCCGCCGCCCGCTCCAAGATCCAAATCTGCATCTTATTAATTGTATAATTCCAAGATGAAATTTATCTGGTCTGCCAATTTCTGCAGCGACGACTTCTCGGGAACATATAATTCTTCCGTCTCTGCTTTGAAGGGAATTGATATGGGCAAATTCATTTGAGTTGAGATTCGAATCGCGAAATGGGTTGCGGGAATTTGTTCTTCTTGGTTCTTGTAACCTTCTCCGTTGCCCTAATTACCTACAATATCATCATCTCTGCTAATGCCCCTCTCCAGCAAGAGCTTCCTGGTCCATCGAGATTTTCGTCTTCCATTACTATCGACCCTGTGATTAAGATGCCGGTGGATAGATCGAAGTCGTTTTCCTCCAAGCGACTGTTCCATACGGCCGTCACTTCCTCGGATTCGGTTTACAACACTTGGCAGTGTCGGATCATGTACTATTGGTTTAAGAAGTTCAAGGATGAACCTAATTCTGAGATGGGTGGTTTCACCAGGATCTTGCACTCGGGGAAGCCCGACAAGTATATGGATGAAATTCCCACGTTTGTTGCTCAGCCTCTGCCGGCGGGAATGGATCAGGTACTAATTTATATGGTGTTCTGTATGCTTTGAAGTTCTTAGGGGAAGGGTTTTTCTGTGATTCTGCGATTCTGTGATGTGCTATCTATGATTTTGTTTGTGCAGTCCACCTGTTTGATAAAATTCCCCTTAGGAAATCCCAAGCTAGTGTTGAAATTTTTTGATTGTTAACACCTCGGCTAGTGAAATAATGTCCAATGGGCAACAATTCTAATTGAATTCAGAATTTTCTATCTTGGATTTGTTTCCTAGAGCTGAAATTACCATCTATTAGCTGCTCATCTGTGGTTTGAAACTGTAACAGGGCTACATAGTCCTCAATAGACCGTGGGCGTTTGTGCAATGGCTTCAAAGTGCGGACATCAAGGAAGAGTAG

mRNA sequence

ATGGAGCAGAAGATGGTTGCAATGGCTCGAAGATCTGAACTGGGCTATTCGAATCGCGAAATGGGTTGCGGGAATTTGTTCTTCTTGGTTCTTGTAACCTTCTCCGTTGCCCTAATTACCTACAATATCATCATCTCTGCTAATGCCCCTCTCCAGCAAGAGCTTCCTGGTCCATCGAGATTTTCGTCTTCCATTACTATCGACCCTGTGATTAAGATGCCGGTGGATAGATCGAAGTCGTTTTCCTCCAAGCGACTGTTCCATACGGCCGTCACTTCCTCGGATTCGGTTTACAACACTTGGCAGTGTCGGATCATGTACTATTGGTTTAAGAAGTTCAAGGATGAACCTAATTCTGAGATGGGTGGTTTCACCAGGATCTTGCACTCGGGGAAGCCCGACAAGTATATGGATGAAATTCCCACGTTTGTTGCTCAGCCTCTGCCGGCGGGAATGGATCAGGGCTACATAGTCCTCAATAGACCGTGGGCGTTTGTGCAATGGCTTCAAAGTGCGGACATCAAGGAAGAGTAG

Coding sequence (CDS)

ATGGAGCAGAAGATGGTTGCAATGGCTCGAAGATCTGAACTGGGCTATTCGAATCGCGAAATGGGTTGCGGGAATTTGTTCTTCTTGGTTCTTGTAACCTTCTCCGTTGCCCTAATTACCTACAATATCATCATCTCTGCTAATGCCCCTCTCCAGCAAGAGCTTCCTGGTCCATCGAGATTTTCGTCTTCCATTACTATCGACCCTGTGATTAAGATGCCGGTGGATAGATCGAAGTCGTTTTCCTCCAAGCGACTGTTCCATACGGCCGTCACTTCCTCGGATTCGGTTTACAACACTTGGCAGTGTCGGATCATGTACTATTGGTTTAAGAAGTTCAAGGATGAACCTAATTCTGAGATGGGTGGTTTCACCAGGATCTTGCACTCGGGGAAGCCCGACAAGTATATGGATGAAATTCCCACGTTTGTTGCTCAGCCTCTGCCGGCGGGAATGGATCAGGGCTACATAGTCCTCAATAGACCGTGGGCGTTTGTGCAATGGCTTCAAAGTGCGGACATCAAGGAAGAGTAG

Protein sequence

MEQKMVAMARRSELGYSNREMGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKSFSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEIPTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE

Homology

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BLAST of Carg03940-RA vs. NCBI nr
Match: XP_022951448.1 (hydroxyproline O-arabinosyltransferase 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 319.7 bits (818), Expect = 6.2e-84
Identity = 154/157 (98.09%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 21  MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKS 80
           MGCGNLFFLVLVTFSVALITYNIIISANAPL+QELPGPSRFSSSITIDPVIKMPVDRSKS
Sbjct: 1   MGCGNLFFLVLVTFSVALITYNIIISANAPLKQELPGPSRFSSSITIDPVIKMPVDRSKS 60

Query: 81  FSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 140
            SSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI
Sbjct: 61  SSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 120

Query: 141 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKE+
Sbjct: 121 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKED 157

[Close]

BLAST of Carg03940-RA vs. NCBI nr
Match: XP_022951449.1 (hydroxyproline O-arabinosyltransferase 1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 319.7 bits (818), Expect = 6.2e-84
Identity = 154/157 (98.09%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 21  MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKS 80
           MGCGNLFFLVLVTFSVALITYNIIISANAPL+QELPGPSRFSSSITIDPVIKMPVDRSKS
Sbjct: 1   MGCGNLFFLVLVTFSVALITYNIIISANAPLKQELPGPSRFSSSITIDPVIKMPVDRSKS 60

Query: 81  FSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 140
            SSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI
Sbjct: 61  SSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 120

Query: 141 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKE+
Sbjct: 121 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKED 157

[Close]

BLAST of Carg03940-RA vs. NCBI nr
Match: XP_023537512.1 (hydroxyproline O-arabinosyltransferase 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 315.5 bits (807), Expect = 1.2e-82
Identity = 151/157 (96.18%), Postives = 154/157 (98.09%), Query Frame = 0


Query: 21  MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKS 80
           MGCGNLFFLVLVTFSVALITYNIIISANAPL+QELPGPSRFSSSIT+DPVIKMP DR KS
Sbjct: 1   MGCGNLFFLVLVTFSVALITYNIIISANAPLKQELPGPSRFSSSITVDPVIKMPADRLKS 60

Query: 81  FSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 140
            SSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI
Sbjct: 61  SSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 120

Query: 141 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKE+
Sbjct: 121 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKED 157

[Close]

BLAST of Carg03940-RA vs. NCBI nr
Match: XP_023002399.1 (hydroxyproline O-arabinosyltransferase 1-like [Cucurbita maxima])

HSP 1 Score: 312.8 bits (800), Expect = 7.6e-82
Identity = 151/157 (96.18%), Postives = 154/157 (98.09%), Query Frame = 0


Query: 21  MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKS 80
           MGCGNLFFLVLVTFSVALITYNIIISANAPL+QELPGPSR SSSITIDPVIKMPVDR KS
Sbjct: 1   MGCGNLFFLVLVTFSVALITYNIIISANAPLKQELPGPSRSSSSITIDPVIKMPVDRLKS 60

Query: 81  FSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 140
            SSK+LFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI
Sbjct: 61  SSSKQLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 120

Query: 141 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKE+
Sbjct: 121 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKED 157

[Close]

BLAST of Carg03940-RA vs. NCBI nr
Match: XP_004138714.1 (PREDICTED: uncharacterized protein LOC101214063 [Cucumis sativus] >KGN62972.1 hypothetical protein Csa_2G382460 [Cucumis sativus])

HSP 1 Score: 304.7 bits (779), Expect = 2.1e-79
Identity = 144/157 (91.72%), Postives = 153/157 (97.45%), Query Frame = 0


Query: 21  MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKS 80
           MGCGNLFFLVLVTFSVALITYNII+SANAPL+QELPGPSR SSSIT+DPVIKMP+DRS++
Sbjct: 1   MGCGNLFFLVLVTFSVALITYNIILSANAPLKQELPGPSRSSSSITVDPVIKMPLDRSET 60

Query: 81  FSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 140
            SSKRLFHTAVT+SDSVYNTWQCRIMYYWFKKFKD PNSEMGGFTRILHSGKPDKYMDEI
Sbjct: 61  SSSKRLFHTAVTASDSVYNTWQCRIMYYWFKKFKDGPNSEMGGFTRILHSGKPDKYMDEI 120

Query: 141 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           PTFVAQPLPAGMD+GYIVLNRPWAFVQWLQ ADIKE+
Sbjct: 121 PTFVAQPLPAGMDRGYIVLNRPWAFVQWLQQADIKED 157

[Close]

BLAST of Carg03940-RA vs. TAIR10
Match: AT5G25265.1 (unknown protein)

HSP 1 Score: 236.5 bits (602), Expect = 1.3e-62
Identity = 119/163 (73.01%), Postives = 134/163 (82.21%), Query Frame = 0


Query: 21  MGC-GNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMP---VD 80
           MGC G LF+ +L+T SVALITYNIIISANAPL+Q  PG S  SS I+IDPVI++P     
Sbjct: 1   MGCGGTLFYPLLITLSVALITYNIIISANAPLKQGFPGRSS-SSDISIDPVIELPRGGGS 60

Query: 81  RSKSFSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDE--PNSEMGGFTRILHSGKPD 140
           R+      RLFHTAVT+SDSVYNTWQCR+MYYWFKK +    P SEMGGFTRILHSGKPD
Sbjct: 61  RNNDGKRIRLFHTAVTASDSVYNTWQCRVMYYWFKKIQASAGPGSEMGGFTRILHSGKPD 120

Query: 141 KYMDEIPTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           +YMDEIPTFVAQPLP+GMDQGY+VLNRPWAFVQWLQ  DIKE+
Sbjct: 121 QYMDEIPTFVAQPLPSGMDQGYVVLNRPWAFVQWLQQTDIKED 162

[Close]

BLAST of Carg03940-RA vs. TAIR10
Match: AT2G25260.1 (unknown protein)

HSP 1 Score: 202.2 bits (513), Expect = 2.6e-52
Identity = 96/155 (61.94%), Postives = 120/155 (77.42%), Query Frame = 0


Query: 24  GNLFFLVLVTFSVAL-ITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKSFS 83
           G  FF +L+T S+ L I YN I+S + PL+QELPG    SS   I   +K P     S  
Sbjct: 5   GKYFFPILMTLSLFLIIRYNYIVSDDPPLRQELPGRRSASSGDDITYTVKTP-----SKK 64

Query: 84  SKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEIPT 143
           +KRLFHTAVT++DSVY+TWQCR+MYYW+ +F+DEP S+MGG+TRILHSG+PD  MDEIPT
Sbjct: 65  TKRLFHTAVTATDSVYSTWQCRVMYYWYNRFRDEPGSDMGGYTRILHSGRPDGLMDEIPT 124

Query: 144 FVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           FVA PLP+G+D+GY+VLNRPWAFVQWLQ A I+E+
Sbjct: 125 FVADPLPSGVDKGYVVLNRPWAFVQWLQQAHIEED 154

[Close]

BLAST of Carg03940-RA vs. TAIR10
Match: AT5G13500.1 (unknown protein)

HSP 1 Score: 172.2 bits (435), Expect = 2.9e-43
Identity = 82/157 (52.23%), Postives = 107/157 (68.15%), Query Frame = 0


Query: 21  MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKS 80
           MG  +   L L+ F   ++TYN++      +     G S    S  +DPV++MP++  K+
Sbjct: 1   MGKASGLLLFLLGFGFFVVTYNLL----TLIVHNRSGVSNSDGSPLLDPVVQMPLNIRKA 60

Query: 81  FSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 140
            SS   FH A+T++D+ YN WQCRIMYYW+K+ K  P S+MGGFTRILHSG  D  MDEI
Sbjct: 61  KSSPAPFHVALTATDAPYNKWQCRIMYYWYKQKKALPGSDMGGFTRILHSGNSDNLMDEI 120

Query: 141 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           PTFV  PLP G+D+GY+VLNRPWAFVQWL+ A IKE+
Sbjct: 121 PTFVVDPLPPGLDRGYVVLNRPWAFVQWLERATIKED 153

[Close]

BLAST of Carg03940-RA vs. Swiss-Prot
Match: sp|Q8W4E6|HPAT1_ARATH (Hydroxyproline O-arabinosyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=HPAT1 PE=1 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.3e-61
Identity = 119/163 (73.01%), Postives = 134/163 (82.21%), Query Frame = 0


Query: 21  MGC-GNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMP---VD 80
           MGC G LF+ +L+T SVALITYNIIISANAPL+Q  PG S  SS I+IDPVI++P     
Sbjct: 1   MGCGGTLFYPLLITLSVALITYNIIISANAPLKQGFPGRSS-SSDISIDPVIELPRGGGS 60

Query: 81  RSKSFSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDE--PNSEMGGFTRILHSGKPD 140
           R+      RLFHTAVT+SDSVYNTWQCR+MYYWFKK +    P SEMGGFTRILHSGKPD
Sbjct: 61  RNNDGKRIRLFHTAVTASDSVYNTWQCRVMYYWFKKIQASAGPGSEMGGFTRILHSGKPD 120

Query: 141 KYMDEIPTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           +YMDEIPTFVAQPLP+GMDQGY+VLNRPWAFVQWLQ  DIKE+
Sbjct: 121 QYMDEIPTFVAQPLPSGMDQGYVVLNRPWAFVQWLQQTDIKED 162

[Close]

BLAST of Carg03940-RA vs. Swiss-Prot
Match: sp|Q494Q2|HPAT2_ARATH (Hydroxyproline O-arabinosyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=HPAT2 PE=1 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 4.7e-51
Identity = 96/155 (61.94%), Postives = 120/155 (77.42%), Query Frame = 0


Query: 24  GNLFFLVLVTFSVAL-ITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKSFS 83
           G  FF +L+T S+ L I YN I+S + PL+QELPG    SS   I   +K P     S  
Sbjct: 5   GKYFFPILMTLSLFLIIRYNYIVSDDPPLRQELPGRRSASSGDDITYTVKTP-----SKK 64

Query: 84  SKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEIPT 143
           +KRLFHTAVT++DSVY+TWQCR+MYYW+ +F+DEP S+MGG+TRILHSG+PD  MDEIPT
Sbjct: 65  TKRLFHTAVTATDSVYSTWQCRVMYYWYNRFRDEPGSDMGGYTRILHSGRPDGLMDEIPT 124

Query: 144 FVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           FVA PLP+G+D+GY+VLNRPWAFVQWLQ A I+E+
Sbjct: 125 FVADPLPSGVDKGYVVLNRPWAFVQWLQQAHIEED 154

[Close]

BLAST of Carg03940-RA vs. Swiss-Prot
Match: sp|Q9FY51|HPAT3_ARATH (Hydroxyproline O-arabinosyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=HPAT3 PE=1 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 5.3e-42
Identity = 82/157 (52.23%), Postives = 107/157 (68.15%), Query Frame = 0


Query: 21  MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKS 80
           MG  +   L L+ F   ++TYN++      +     G S    S  +DPV++MP++  K+
Sbjct: 1   MGKASGLLLFLLGFGFFVVTYNLL----TLIVHNRSGVSNSDGSPLLDPVVQMPLNIRKA 60

Query: 81  FSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 140
            SS   FH A+T++D+ YN WQCRIMYYW+K+ K  P S+MGGFTRILHSG  D  MDEI
Sbjct: 61  KSSPAPFHVALTATDAPYNKWQCRIMYYWYKQKKALPGSDMGGFTRILHSGNSDNLMDEI 120

Query: 141 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           PTFV  PLP G+D+GY+VLNRPWAFVQWL+ A IKE+
Sbjct: 121 PTFVVDPLPPGLDRGYVVLNRPWAFVQWLERATIKED 153

[Close]

BLAST of Carg03940-RA vs. TrEMBL
Match: tr|A0A1S3BBR3|A0A1S3BBR3_CUCME (uncharacterized protein LOC103488330 OS=Cucumis melo OX=3656 GN=LOC103488330 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 1.4e-79
Identity = 144/157 (91.72%), Postives = 153/157 (97.45%), Query Frame = 0


Query: 21  MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKS 80
           MGCGNLFFLVLVTFSVALITYNII+SANAPL+QELPGPSR SSSIT+DPVIKMP+DRS++
Sbjct: 1   MGCGNLFFLVLVTFSVALITYNIILSANAPLKQELPGPSRSSSSITVDPVIKMPLDRSET 60

Query: 81  FSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 140
            SSKRLFHTAVT+SDSVYNTWQCRIMYYWFKKFKD PNSEMGGFTRILHSGKPDKYMDEI
Sbjct: 61  SSSKRLFHTAVTASDSVYNTWQCRIMYYWFKKFKDGPNSEMGGFTRILHSGKPDKYMDEI 120

Query: 141 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           PTFVAQPLPAGMD+GYIVLNRPWAFVQWLQ ADIKE+
Sbjct: 121 PTFVAQPLPAGMDRGYIVLNRPWAFVQWLQQADIKED 157

[Close]

BLAST of Carg03940-RA vs. TrEMBL
Match: tr|A0A0A0LQB9|A0A0A0LQB9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382460 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 1.4e-79
Identity = 144/157 (91.72%), Postives = 153/157 (97.45%), Query Frame = 0


Query: 21  MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKS 80
           MGCGNLFFLVLVTFSVALITYNII+SANAPL+QELPGPSR SSSIT+DPVIKMP+DRS++
Sbjct: 1   MGCGNLFFLVLVTFSVALITYNIILSANAPLKQELPGPSRSSSSITVDPVIKMPLDRSET 60

Query: 81  FSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 140
            SSKRLFHTAVT+SDSVYNTWQCRIMYYWFKKFKD PNSEMGGFTRILHSGKPDKYMDEI
Sbjct: 61  SSSKRLFHTAVTASDSVYNTWQCRIMYYWFKKFKDGPNSEMGGFTRILHSGKPDKYMDEI 120

Query: 141 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           PTFVAQPLPAGMD+GYIVLNRPWAFVQWLQ ADIKE+
Sbjct: 121 PTFVAQPLPAGMDRGYIVLNRPWAFVQWLQQADIKED 157

[Close]

BLAST of Carg03940-RA vs. TrEMBL
Match: tr|A0A2I4GIQ1|A0A2I4GIQ1_9ROSI (uncharacterized protein LOC109008222 OS=Juglans regia OX=51240 GN=LOC109008222 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 5.6e-73
Identity = 137/162 (84.57%), Postives = 148/162 (91.36%), Query Frame = 0


Query: 21  MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSS-ITIDPVIKMPVDRSK 80
           MGCGN FF VLVTFSVALITYNIIISANAPL+ ELPGPSR SSS I++DP+IKMPVDRS+
Sbjct: 1   MGCGNTFFTVLVTFSVALITYNIIISANAPLKLELPGPSRSSSSRISVDPIIKMPVDRSR 60

Query: 81  ----SFSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDK 140
               S S  RLFHTAVT+SDSVYNTWQCR+MYYWFKKFKD PNSEMGG+TRILHSGKPDK
Sbjct: 61  GGAGSKSPGRLFHTAVTASDSVYNTWQCRVMYYWFKKFKDSPNSEMGGYTRILHSGKPDK 120

Query: 141 YMDEIPTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           YMDEIPTFVAQPLP+G+DQGYIVLNRPWAFVQWLQ ADIKE+
Sbjct: 121 YMDEIPTFVAQPLPSGLDQGYIVLNRPWAFVQWLQQADIKED 162

[Close]

BLAST of Carg03940-RA vs. TrEMBL
Match: tr|M5XP31|M5XP31_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G485800 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.2e-72
Identity = 136/160 (85.00%), Postives = 149/160 (93.12%), Query Frame = 0


Query: 21  MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSR-FSSSITIDPVIKMPVDRS- 80
           MGCGN FF +LVTFSVALITYNIIISAN+PLQQ+LPGPSR  SSSI++DP+I+MP+ RS 
Sbjct: 1   MGCGNFFFTILVTFSVALITYNIIISANSPLQQDLPGPSRSSSSSISVDPIIQMPLHRSR 60

Query: 81  -KSFSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYM 140
            K  SSKRLFHTAVT+SDSVYNTWQCRIMYYWFKKF++EPNS MGGFTRILHSGKPDKYM
Sbjct: 61  GKLGSSKRLFHTAVTASDSVYNTWQCRIMYYWFKKFQNEPNSGMGGFTRILHSGKPDKYM 120

Query: 141 DEIPTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           DEIPTFVAQPLPAGMD+GYIVLNRPWAFVQWLQ ADIKE+
Sbjct: 121 DEIPTFVAQPLPAGMDRGYIVLNRPWAFVQWLQQADIKED 160

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BLAST of Carg03940-RA vs. TrEMBL
Match: tr|A0A2P6PXN2|A0A2P6PXN2_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0297261 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 1.6e-72
Identity = 136/161 (84.47%), Postives = 149/161 (92.55%), Query Frame = 0


Query: 21  MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSR--FSSSITIDPVIKMPVDRS 80
           MGCGN FF +LVTFSVALITYNIIISAN+PLQQ+LPGPSR   SSSI++DP+IKMP DRS
Sbjct: 1   MGCGNFFFTILVTFSVALITYNIIISANSPLQQDLPGPSRSSSSSSISVDPIIKMPTDRS 60

Query: 81  --KSFSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKY 140
             KS +SKRLFHTAVT+SDSVYNTWQ RIMYYWFKKF++EP SEMGGFTRILHSGKPDKY
Sbjct: 61  RGKSANSKRLFHTAVTASDSVYNTWQTRIMYYWFKKFQNEPGSEMGGFTRILHSGKPDKY 120

Query: 141 MDEIPTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           MDEIPTFVAQPLPAGMD+GYIVLNRPWAFVQWLQ A+IKE+
Sbjct: 121 MDEIPTFVAQPLPAGMDRGYIVLNRPWAFVQWLQQANIKED 161

The following BLAST results are available for this feature:

BLAST of Carg03940-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022951448.1	6.2e-84	98.09	hydroxyproline O-arabinosyltransferase 1-like isoform X1 [Cucurbita moschata]	[more]
XP_022951449.1	6.2e-84	98.09	hydroxyproline O-arabinosyltransferase 1-like isoform X2 [Cucurbita moschata]	[more]
XP_023537512.1	1.2e-82	96.18	hydroxyproline O-arabinosyltransferase 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_023002399.1	7.6e-82	96.18	hydroxyproline O-arabinosyltransferase 1-like [Cucurbita maxima]	[more]
XP_004138714.1	2.1e-79	91.72	PREDICTED: uncharacterized protein LOC101214063 [Cucumis sativus] >KGN62972.1 hy...	[more]

BLAST of Carg03940-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT5G25265.1	1.3e-62	73.01	unknown protein	[more]
AT2G25260.1	2.6e-52	61.94	unknown protein	[more]
AT5G13500.1	2.9e-43	52.23	unknown protein	[more]

BLAST of Carg03940-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8W4E6\|HPAT1_ARATH	2.3e-61	73.01	Hydroxyproline O-arabinosyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=HPAT...	[more]
sp\|Q494Q2\|HPAT2_ARATH	4.7e-51	61.94	Hydroxyproline O-arabinosyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=HPAT...	[more]
sp\|Q9FY51\|HPAT3_ARATH	5.3e-42	52.23	Hydroxyproline O-arabinosyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=HPAT...	[more]

BLAST of Carg03940-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BBR3\|A0A1S3BBR3_CUCME	1.4e-79	91.72	uncharacterized protein LOC103488330 OS=Cucumis melo OX=3656 GN=LOC103488330 PE=...	[more]
tr\|A0A0A0LQB9\|A0A0A0LQB9_CUCSA	1.4e-79	91.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382460 PE=4 SV=1	[more]
tr\|A0A2I4GIQ1\|A0A2I4GIQ1_9ROSI	5.6e-73	84.57	uncharacterized protein LOC109008222 OS=Juglans regia OX=51240 GN=LOC109008222 P...	[more]
tr\|M5XP31\|M5XP31_PRUPE	1.2e-72	85.00	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G485800 PE=4 SV=1	[more]
tr\|A0A2P6PXN2\|A0A2P6PXN2_ROSCH	1.6e-72	84.47	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0297261 PE=4...	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg03940	Carg03940	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg03940-RA	Carg03940-RA-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg03940-RA.CDS.3	Carg03940-RA.CDS.3	CDS
Carg03940-RA.CDS.2	Carg03940-RA.CDS.2	CDS
Carg03940-RA.CDS.1	Carg03940-RA.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg03940-RA.exon.3	Carg03940-RA.exon.3	exon
Carg03940-RA.exon.2	Carg03940-RA.exon.2	exon
Carg03940-RA.exon.1	Carg03940-RA.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31485:SF3	SUBFAMILY NOT NAMED	coord: 21..177
None	No IPR available	PANTHER	PTHR31485	FAMILY NOT NAMED	coord: 21..177