Carg03940 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg03940
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Hydroxyproline O-arabinosyltransferase
Location	Cucurbita_argyrosperma_scaffold_011 : 888811 .. 889856 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCAGAAGATGGTTGCAATGGCTCGAAGATCTGAACTGGGCTGTATGGCCGACTGTTTATTTTGTGGAGTTTGTAACAATCCCAGCCGCCGCCCGCTCCAAGATCCAAATCTGCATCTTATTAATTGTATAATTCCAAGATGAAATTTATCTGGTCTGCCAATTTCTGCAGCGACGACTTCTCGGGAACATATAATTCTTCCGTCTCTGCTTTGAAGGGAATTGATATGGGCAAATTCATTTGAGTTGAGATTCGAATCGCGAAATGGGTTGCGGGAATTTGTTCTTCTTGGTTCTTGTAACCTTCTCCGTTGCCCTAATTACCTACAATATCATCATCTCTGCTAATGCCCCTCTCCAGCAAGAGCTTCCTGGTCCATCGAGATTTTCGTCTTCCATTACTATCGACCCTGTGATTAAGATGCCGGTGGATAGATCGAAGTCGTTTTCCTCCAAGCGACTGTTCCATACGGCCGTCACTTCCTCGGATTCGGTTTACAACACTTGGCAGTGTCGGATCATGTACTATTGGTTTAAGAAGTTCAAGGATGAACCTAATTCTGAGATGGGTGGTTTCACCAGGATCTTGCACTCGGGGAAGCCCGACAAGTATATGGATGAAATTCCCACGTTTGTTGCTCAGCCTCTGCCGGCGGGAATGGATCAGGTACTAATTTATATGGTGTTCTGTATGCTTTGAAGTTCTTAGGGGAAGGGTTTTTCTGTGATTCTGCGATTCTGTGATGTGCTATCTATGATTTTGTTTGTGCAGTCCACCTGTTTGATAAAATTCCCCTTAGGAAATCCCAAGCTAGTGTTGAAATTTTTTGATTGTTAACACCTCGGCTAGTGAAATAATGTCCAATGGGCAACAATTCTAATTGAATTCAGAATTTTCTATCTTGGATTTGTTTCCTAGAGCTGAAATTACCATCTATTAGCTGCTCATCTGTGGTTTGAAACTGTAACAGGGCTACATAGTCCTCAATAGACCGTGGGCGTTTGTGCAATGGCTTCAAAGTGCGGACATCAAGGAAGAGTAG

mRNA sequence

ATGGAGCAGAAGATGGTTGCAATGGCTCGAAGATCTGAACTGGGCTATTCGAATCGCGAAATGGGTTGCGGGAATTTGTTCTTCTTGGTTCTTGTAACCTTCTCCGTTGCCCTAATTACCTACAATATCATCATCTCTGCTAATGCCCCTCTCCAGCAAGAGCTTCCTGGTCCATCGAGATTTTCGTCTTCCATTACTATCGACCCTGTGATTAAGATGCCGGTGGATAGATCGAAGTCGTTTTCCTCCAAGCGACTGTTCCATACGGCCGTCACTTCCTCGGATTCGGTTTACAACACTTGGCAGTGTCGGATCATGTACTATTGGTTTAAGAAGTTCAAGGATGAACCTAATTCTGAGATGGGTGGTTTCACCAGGATCTTGCACTCGGGGAAGCCCGACAAGTATATGGATGAAATTCCCACGTTTGTTGCTCAGCCTCTGCCGGCGGGAATGGATCAGGGCTACATAGTCCTCAATAGACCGTGGGCGTTTGTGCAATGGCTTCAAAGTGCGGACATCAAGGAAGAGTAG

Coding sequence (CDS)

ATGGAGCAGAAGATGGTTGCAATGGCTCGAAGATCTGAACTGGGCTATTCGAATCGCGAAATGGGTTGCGGGAATTTGTTCTTCTTGGTTCTTGTAACCTTCTCCGTTGCCCTAATTACCTACAATATCATCATCTCTGCTAATGCCCCTCTCCAGCAAGAGCTTCCTGGTCCATCGAGATTTTCGTCTTCCATTACTATCGACCCTGTGATTAAGATGCCGGTGGATAGATCGAAGTCGTTTTCCTCCAAGCGACTGTTCCATACGGCCGTCACTTCCTCGGATTCGGTTTACAACACTTGGCAGTGTCGGATCATGTACTATTGGTTTAAGAAGTTCAAGGATGAACCTAATTCTGAGATGGGTGGTTTCACCAGGATCTTGCACTCGGGGAAGCCCGACAAGTATATGGATGAAATTCCCACGTTTGTTGCTCAGCCTCTGCCGGCGGGAATGGATCAGGGCTACATAGTCCTCAATAGACCGTGGGCGTTTGTGCAATGGCTTCAAAGTGCGGACATCAAGGAAGAGTAG

Protein sequence

MEQKMVAMARRSELGYSNREMGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKSFSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEIPTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE

Homology

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BLAST of Carg03940 vs. NCBI nr
Match: XP_022951448.1 (hydroxyproline O-arabinosyltransferase 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 319.7 bits (818), Expect = 6.2e-84
Identity = 154/157 (98.09%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 21  MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKS 80
           MGCGNLFFLVLVTFSVALITYNIIISANAPL+QELPGPSRFSSSITIDPVIKMPVDRSKS
Sbjct: 1   MGCGNLFFLVLVTFSVALITYNIIISANAPLKQELPGPSRFSSSITIDPVIKMPVDRSKS 60

Query: 81  FSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 140
            SSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI
Sbjct: 61  SSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 120

Query: 141 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKE+
Sbjct: 121 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKED 157

[Close]

BLAST of Carg03940 vs. NCBI nr
Match: XP_022951449.1 (hydroxyproline O-arabinosyltransferase 1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 319.7 bits (818), Expect = 6.2e-84
Identity = 154/157 (98.09%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 21  MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKS 80
           MGCGNLFFLVLVTFSVALITYNIIISANAPL+QELPGPSRFSSSITIDPVIKMPVDRSKS
Sbjct: 1   MGCGNLFFLVLVTFSVALITYNIIISANAPLKQELPGPSRFSSSITIDPVIKMPVDRSKS 60

Query: 81  FSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 140
            SSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI
Sbjct: 61  SSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 120

Query: 141 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKE+
Sbjct: 121 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKED 157

[Close]

BLAST of Carg03940 vs. NCBI nr
Match: XP_023537512.1 (hydroxyproline O-arabinosyltransferase 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 315.5 bits (807), Expect = 1.2e-82
Identity = 151/157 (96.18%), Postives = 154/157 (98.09%), Query Frame = 0


Query: 21  MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKS 80
           MGCGNLFFLVLVTFSVALITYNIIISANAPL+QELPGPSRFSSSIT+DPVIKMP DR KS
Sbjct: 1   MGCGNLFFLVLVTFSVALITYNIIISANAPLKQELPGPSRFSSSITVDPVIKMPADRLKS 60

Query: 81  FSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 140
            SSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI
Sbjct: 61  SSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 120

Query: 141 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKE+
Sbjct: 121 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKED 157

[Close]

BLAST of Carg03940 vs. NCBI nr
Match: XP_023002399.1 (hydroxyproline O-arabinosyltransferase 1-like [Cucurbita maxima])

HSP 1 Score: 312.8 bits (800), Expect = 7.6e-82
Identity = 151/157 (96.18%), Postives = 154/157 (98.09%), Query Frame = 0


Query: 21  MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKS 80
           MGCGNLFFLVLVTFSVALITYNIIISANAPL+QELPGPSR SSSITIDPVIKMPVDR KS
Sbjct: 1   MGCGNLFFLVLVTFSVALITYNIIISANAPLKQELPGPSRSSSSITIDPVIKMPVDRLKS 60

Query: 81  FSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 140
            SSK+LFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI
Sbjct: 61  SSSKQLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 120

Query: 141 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKE+
Sbjct: 121 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKED 157

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BLAST of Carg03940 vs. NCBI nr
Match: XP_004138714.1 (PREDICTED: uncharacterized protein LOC101214063 [Cucumis sativus] >KGN62972.1 hypothetical protein Csa_2G382460 [Cucumis sativus])

HSP 1 Score: 304.7 bits (779), Expect = 2.1e-79
Identity = 144/157 (91.72%), Postives = 153/157 (97.45%), Query Frame = 0


Query: 21  MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKS 80
           MGCGNLFFLVLVTFSVALITYNII+SANAPL+QELPGPSR SSSIT+DPVIKMP+DRS++
Sbjct: 1   MGCGNLFFLVLVTFSVALITYNIILSANAPLKQELPGPSRSSSSITVDPVIKMPLDRSET 60

Query: 81  FSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 140
            SSKRLFHTAVT+SDSVYNTWQCRIMYYWFKKFKD PNSEMGGFTRILHSGKPDKYMDEI
Sbjct: 61  SSSKRLFHTAVTASDSVYNTWQCRIMYYWFKKFKDGPNSEMGGFTRILHSGKPDKYMDEI 120

Query: 141 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           PTFVAQPLPAGMD+GYIVLNRPWAFVQWLQ ADIKE+
Sbjct: 121 PTFVAQPLPAGMDRGYIVLNRPWAFVQWLQQADIKED 157

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BLAST of Carg03940 vs. TAIR10
Match: AT5G25265.1 (unknown protein)

HSP 1 Score: 236.5 bits (602), Expect = 1.3e-62
Identity = 119/163 (73.01%), Postives = 134/163 (82.21%), Query Frame = 0


Query: 21  MGC-GNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMP---VD 80
           MGC G LF+ +L+T SVALITYNIIISANAPL+Q  PG S  SS I+IDPVI++P     
Sbjct: 1   MGCGGTLFYPLLITLSVALITYNIIISANAPLKQGFPGRSS-SSDISIDPVIELPRGGGS 60

Query: 81  RSKSFSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDE--PNSEMGGFTRILHSGKPD 140
           R+      RLFHTAVT+SDSVYNTWQCR+MYYWFKK +    P SEMGGFTRILHSGKPD
Sbjct: 61  RNNDGKRIRLFHTAVTASDSVYNTWQCRVMYYWFKKIQASAGPGSEMGGFTRILHSGKPD 120

Query: 141 KYMDEIPTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           +YMDEIPTFVAQPLP+GMDQGY+VLNRPWAFVQWLQ  DIKE+
Sbjct: 121 QYMDEIPTFVAQPLPSGMDQGYVVLNRPWAFVQWLQQTDIKED 162

[Close]

BLAST of Carg03940 vs. TAIR10
Match: AT2G25260.1 (unknown protein)

HSP 1 Score: 202.2 bits (513), Expect = 2.6e-52
Identity = 96/155 (61.94%), Postives = 120/155 (77.42%), Query Frame = 0


Query: 24  GNLFFLVLVTFSVAL-ITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKSFS 83
           G  FF +L+T S+ L I YN I+S + PL+QELPG    SS   I   +K P     S  
Sbjct: 5   GKYFFPILMTLSLFLIIRYNYIVSDDPPLRQELPGRRSASSGDDITYTVKTP-----SKK 64

Query: 84  SKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEIPT 143
           +KRLFHTAVT++DSVY+TWQCR+MYYW+ +F+DEP S+MGG+TRILHSG+PD  MDEIPT
Sbjct: 65  TKRLFHTAVTATDSVYSTWQCRVMYYWYNRFRDEPGSDMGGYTRILHSGRPDGLMDEIPT 124

Query: 144 FVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           FVA PLP+G+D+GY+VLNRPWAFVQWLQ A I+E+
Sbjct: 125 FVADPLPSGVDKGYVVLNRPWAFVQWLQQAHIEED 154

[Close]

BLAST of Carg03940 vs. TAIR10
Match: AT5G13500.1 (unknown protein)

HSP 1 Score: 172.2 bits (435), Expect = 2.9e-43
Identity = 82/157 (52.23%), Postives = 107/157 (68.15%), Query Frame = 0


Query: 21  MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKS 80
           MG  +   L L+ F   ++TYN++      +     G S    S  +DPV++MP++  K+
Sbjct: 1   MGKASGLLLFLLGFGFFVVTYNLL----TLIVHNRSGVSNSDGSPLLDPVVQMPLNIRKA 60

Query: 81  FSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 140
            SS   FH A+T++D+ YN WQCRIMYYW+K+ K  P S+MGGFTRILHSG  D  MDEI
Sbjct: 61  KSSPAPFHVALTATDAPYNKWQCRIMYYWYKQKKALPGSDMGGFTRILHSGNSDNLMDEI 120

Query: 141 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           PTFV  PLP G+D+GY+VLNRPWAFVQWL+ A IKE+
Sbjct: 121 PTFVVDPLPPGLDRGYVVLNRPWAFVQWLERATIKED 153

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BLAST of Carg03940 vs. Swiss-Prot
Match: sp|Q8W4E6|HPAT1_ARATH (Hydroxyproline O-arabinosyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=HPAT1 PE=1 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.3e-61
Identity = 119/163 (73.01%), Postives = 134/163 (82.21%), Query Frame = 0


Query: 21  MGC-GNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMP---VD 80
           MGC G LF+ +L+T SVALITYNIIISANAPL+Q  PG S  SS I+IDPVI++P     
Sbjct: 1   MGCGGTLFYPLLITLSVALITYNIIISANAPLKQGFPGRSS-SSDISIDPVIELPRGGGS 60

Query: 81  RSKSFSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDE--PNSEMGGFTRILHSGKPD 140
           R+      RLFHTAVT+SDSVYNTWQCR+MYYWFKK +    P SEMGGFTRILHSGKPD
Sbjct: 61  RNNDGKRIRLFHTAVTASDSVYNTWQCRVMYYWFKKIQASAGPGSEMGGFTRILHSGKPD 120

Query: 141 KYMDEIPTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           +YMDEIPTFVAQPLP+GMDQGY+VLNRPWAFVQWLQ  DIKE+
Sbjct: 121 QYMDEIPTFVAQPLPSGMDQGYVVLNRPWAFVQWLQQTDIKED 162

[Close]

BLAST of Carg03940 vs. Swiss-Prot
Match: sp|Q494Q2|HPAT2_ARATH (Hydroxyproline O-arabinosyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=HPAT2 PE=1 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 4.7e-51
Identity = 96/155 (61.94%), Postives = 120/155 (77.42%), Query Frame = 0


Query: 24  GNLFFLVLVTFSVAL-ITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKSFS 83
           G  FF +L+T S+ L I YN I+S + PL+QELPG    SS   I   +K P     S  
Sbjct: 5   GKYFFPILMTLSLFLIIRYNYIVSDDPPLRQELPGRRSASSGDDITYTVKTP-----SKK 64

Query: 84  SKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEIPT 143
           +KRLFHTAVT++DSVY+TWQCR+MYYW+ +F+DEP S+MGG+TRILHSG+PD  MDEIPT
Sbjct: 65  TKRLFHTAVTATDSVYSTWQCRVMYYWYNRFRDEPGSDMGGYTRILHSGRPDGLMDEIPT 124

Query: 144 FVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           FVA PLP+G+D+GY+VLNRPWAFVQWLQ A I+E+
Sbjct: 125 FVADPLPSGVDKGYVVLNRPWAFVQWLQQAHIEED 154

[Close]

BLAST of Carg03940 vs. Swiss-Prot
Match: sp|Q9FY51|HPAT3_ARATH (Hydroxyproline O-arabinosyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=HPAT3 PE=1 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 5.3e-42
Identity = 82/157 (52.23%), Postives = 107/157 (68.15%), Query Frame = 0


Query: 21  MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKS 80
           MG  +   L L+ F   ++TYN++      +     G S    S  +DPV++MP++  K+
Sbjct: 1   MGKASGLLLFLLGFGFFVVTYNLL----TLIVHNRSGVSNSDGSPLLDPVVQMPLNIRKA 60

Query: 81  FSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 140
            SS   FH A+T++D+ YN WQCRIMYYW+K+ K  P S+MGGFTRILHSG  D  MDEI
Sbjct: 61  KSSPAPFHVALTATDAPYNKWQCRIMYYWYKQKKALPGSDMGGFTRILHSGNSDNLMDEI 120

Query: 141 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           PTFV  PLP G+D+GY+VLNRPWAFVQWL+ A IKE+
Sbjct: 121 PTFVVDPLPPGLDRGYVVLNRPWAFVQWLERATIKED 153

[Close]

BLAST of Carg03940 vs. TrEMBL
Match: tr|A0A1S3BBR3|A0A1S3BBR3_CUCME (uncharacterized protein LOC103488330 OS=Cucumis melo OX=3656 GN=LOC103488330 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 1.4e-79
Identity = 144/157 (91.72%), Postives = 153/157 (97.45%), Query Frame = 0


Query: 21  MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKS 80
           MGCGNLFFLVLVTFSVALITYNII+SANAPL+QELPGPSR SSSIT+DPVIKMP+DRS++
Sbjct: 1   MGCGNLFFLVLVTFSVALITYNIILSANAPLKQELPGPSRSSSSITVDPVIKMPLDRSET 60

Query: 81  FSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 140
            SSKRLFHTAVT+SDSVYNTWQCRIMYYWFKKFKD PNSEMGGFTRILHSGKPDKYMDEI
Sbjct: 61  SSSKRLFHTAVTASDSVYNTWQCRIMYYWFKKFKDGPNSEMGGFTRILHSGKPDKYMDEI 120

Query: 141 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           PTFVAQPLPAGMD+GYIVLNRPWAFVQWLQ ADIKE+
Sbjct: 121 PTFVAQPLPAGMDRGYIVLNRPWAFVQWLQQADIKED 157

[Close]

BLAST of Carg03940 vs. TrEMBL
Match: tr|A0A0A0LQB9|A0A0A0LQB9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382460 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 1.4e-79
Identity = 144/157 (91.72%), Postives = 153/157 (97.45%), Query Frame = 0


Query: 21  MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSSITIDPVIKMPVDRSKS 80
           MGCGNLFFLVLVTFSVALITYNII+SANAPL+QELPGPSR SSSIT+DPVIKMP+DRS++
Sbjct: 1   MGCGNLFFLVLVTFSVALITYNIILSANAPLKQELPGPSRSSSSITVDPVIKMPLDRSET 60

Query: 81  FSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYMDEI 140
            SSKRLFHTAVT+SDSVYNTWQCRIMYYWFKKFKD PNSEMGGFTRILHSGKPDKYMDEI
Sbjct: 61  SSSKRLFHTAVTASDSVYNTWQCRIMYYWFKKFKDGPNSEMGGFTRILHSGKPDKYMDEI 120

Query: 141 PTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           PTFVAQPLPAGMD+GYIVLNRPWAFVQWLQ ADIKE+
Sbjct: 121 PTFVAQPLPAGMDRGYIVLNRPWAFVQWLQQADIKED 157

[Close]

BLAST of Carg03940 vs. TrEMBL
Match: tr|A0A2I4GIQ1|A0A2I4GIQ1_9ROSI (uncharacterized protein LOC109008222 OS=Juglans regia OX=51240 GN=LOC109008222 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 5.6e-73
Identity = 137/162 (84.57%), Postives = 148/162 (91.36%), Query Frame = 0


Query: 21  MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSRFSSS-ITIDPVIKMPVDRSK 80
           MGCGN FF VLVTFSVALITYNIIISANAPL+ ELPGPSR SSS I++DP+IKMPVDRS+
Sbjct: 1   MGCGNTFFTVLVTFSVALITYNIIISANAPLKLELPGPSRSSSSRISVDPIIKMPVDRSR 60

Query: 81  ----SFSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDK 140
               S S  RLFHTAVT+SDSVYNTWQCR+MYYWFKKFKD PNSEMGG+TRILHSGKPDK
Sbjct: 61  GGAGSKSPGRLFHTAVTASDSVYNTWQCRVMYYWFKKFKDSPNSEMGGYTRILHSGKPDK 120

Query: 141 YMDEIPTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           YMDEIPTFVAQPLP+G+DQGYIVLNRPWAFVQWLQ ADIKE+
Sbjct: 121 YMDEIPTFVAQPLPSGLDQGYIVLNRPWAFVQWLQQADIKED 162

[Close]

BLAST of Carg03940 vs. TrEMBL
Match: tr|M5XP31|M5XP31_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G485800 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.2e-72
Identity = 136/160 (85.00%), Postives = 149/160 (93.12%), Query Frame = 0


Query: 21  MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSR-FSSSITIDPVIKMPVDRS- 80
           MGCGN FF +LVTFSVALITYNIIISAN+PLQQ+LPGPSR  SSSI++DP+I+MP+ RS 
Sbjct: 1   MGCGNFFFTILVTFSVALITYNIIISANSPLQQDLPGPSRSSSSSISVDPIIQMPLHRSR 60

Query: 81  -KSFSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKYM 140
            K  SSKRLFHTAVT+SDSVYNTWQCRIMYYWFKKF++EPNS MGGFTRILHSGKPDKYM
Sbjct: 61  GKLGSSKRLFHTAVTASDSVYNTWQCRIMYYWFKKFQNEPNSGMGGFTRILHSGKPDKYM 120

Query: 141 DEIPTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           DEIPTFVAQPLPAGMD+GYIVLNRPWAFVQWLQ ADIKE+
Sbjct: 121 DEIPTFVAQPLPAGMDRGYIVLNRPWAFVQWLQQADIKED 160

[Close]

BLAST of Carg03940 vs. TrEMBL
Match: tr|A0A2P6PXN2|A0A2P6PXN2_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0297261 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 1.6e-72
Identity = 136/161 (84.47%), Postives = 149/161 (92.55%), Query Frame = 0


Query: 21  MGCGNLFFLVLVTFSVALITYNIIISANAPLQQELPGPSR--FSSSITIDPVIKMPVDRS 80
           MGCGN FF +LVTFSVALITYNIIISAN+PLQQ+LPGPSR   SSSI++DP+IKMP DRS
Sbjct: 1   MGCGNFFFTILVTFSVALITYNIIISANSPLQQDLPGPSRSSSSSSISVDPIIKMPTDRS 60

Query: 81  --KSFSSKRLFHTAVTSSDSVYNTWQCRIMYYWFKKFKDEPNSEMGGFTRILHSGKPDKY 140
             KS +SKRLFHTAVT+SDSVYNTWQ RIMYYWFKKF++EP SEMGGFTRILHSGKPDKY
Sbjct: 61  RGKSANSKRLFHTAVTASDSVYNTWQTRIMYYWFKKFQNEPGSEMGGFTRILHSGKPDKY 120

Query: 141 MDEIPTFVAQPLPAGMDQGYIVLNRPWAFVQWLQSADIKEE 178
           MDEIPTFVAQPLPAGMD+GYIVLNRPWAFVQWLQ A+IKE+
Sbjct: 121 MDEIPTFVAQPLPAGMDRGYIVLNRPWAFVQWLQQANIKED 161

The following BLAST results are available for this feature:

BLAST of Carg03940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022951448.1	6.2e-84	98.09	hydroxyproline O-arabinosyltransferase 1-like isoform X1 [Cucurbita moschata]	[more]
XP_022951449.1	6.2e-84	98.09	hydroxyproline O-arabinosyltransferase 1-like isoform X2 [Cucurbita moschata]	[more]
XP_023537512.1	1.2e-82	96.18	hydroxyproline O-arabinosyltransferase 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_023002399.1	7.6e-82	96.18	hydroxyproline O-arabinosyltransferase 1-like [Cucurbita maxima]	[more]
XP_004138714.1	2.1e-79	91.72	PREDICTED: uncharacterized protein LOC101214063 [Cucumis sativus] >KGN62972.1 hy...	[more]

BLAST of Carg03940 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G25265.1	1.3e-62	73.01	unknown protein	[more]
AT2G25260.1	2.6e-52	61.94	unknown protein	[more]
AT5G13500.1	2.9e-43	52.23	unknown protein	[more]

BLAST of Carg03940 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8W4E6\|HPAT1_ARATH	2.3e-61	73.01	Hydroxyproline O-arabinosyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=HPAT...	[more]
sp\|Q494Q2\|HPAT2_ARATH	4.7e-51	61.94	Hydroxyproline O-arabinosyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=HPAT...	[more]
sp\|Q9FY51\|HPAT3_ARATH	5.3e-42	52.23	Hydroxyproline O-arabinosyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=HPAT...	[more]

BLAST of Carg03940 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BBR3\|A0A1S3BBR3_CUCME	1.4e-79	91.72	uncharacterized protein LOC103488330 OS=Cucumis melo OX=3656 GN=LOC103488330 PE=...	[more]
tr\|A0A0A0LQB9\|A0A0A0LQB9_CUCSA	1.4e-79	91.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382460 PE=4 SV=1	[more]
tr\|A0A2I4GIQ1\|A0A2I4GIQ1_9ROSI	5.6e-73	84.57	uncharacterized protein LOC109008222 OS=Juglans regia OX=51240 GN=LOC109008222 P...	[more]
tr\|M5XP31\|M5XP31_PRUPE	1.2e-72	85.00	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G485800 PE=4 SV=1	[more]
tr\|A0A2P6PXN2\|A0A2P6PXN2_ROSCH	1.6e-72	84.47	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0297261 PE=4...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03940-RA	Carg03940-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31485:SF3	SUBFAMILY NOT NAMED	coord: 21..177
None	No IPR available	PANTHER	PTHR31485	FAMILY NOT NAMED	coord: 21..177

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg03940	Cucurbita moschata (Rifu)	carcmoB1310
Carg03940	Cucurbita moschata (Rifu)	carcmoB1313
Carg03940	Cucurbita moschata (Rifu)	carcmoB1315
Carg03940	Cucurbita moschata (Rifu)	carcmoB1319
Carg03940	Cucurbita pepo (Zucchini)	carcpeB1352
Carg03940	Cucurbita pepo (Zucchini)	carcpeB1356
Carg03940	Cucurbita pepo (Zucchini)	carcpeB1363
Carg03940	Cucurbita pepo (Zucchini)	carcpeB1364
Carg03940	Cucurbita pepo (Zucchini)	carcpeB1368
Carg03940	Wild cucumber (PI 183967)	carcpiB1010
Carg03940	Cucumber (Chinese Long) v2	carcuB0987
Carg03940	Cucumber (Chinese Long) v3	carcucB1015
Carg03940	Bottle gourd (USVL1VR-Ls)	carlsiB893
Carg03940	Bottle gourd (USVL1VR-Ls)	carlsiB898
Carg03940	Melon (DHL92) v3.5.1	carmeB0955
Carg03940	Melon (DHL92) v3.6.1	carmedB0961
Carg03940	Watermelon (Charleston Gray)	carwcgB0957
Carg03940	Watermelon (Charleston Gray)	carwcgB0958
Carg03940	Watermelon (Charleston Gray)	carwcgB0951
Carg03940	Watermelon (Charleston Gray)	carwcgB0955
Carg03940	Watermelon (97103) v1	carwmB0980
Carg03940	Watermelon (97103) v1	carwmB0978
Carg03940	Watermelon (97103) v2	carwmbB1030
Carg03940	Watermelon (97103) v2	carwmbB1033
Carg03940	Watermelon (97103) v2	carwmbB1034
Carg03940	Watermelon (97103) v2	carwmbB1036
Carg03940	Wax gourd	carwgoB1142
Carg03940	Wax gourd	carwgoB1149
Carg03940	Silver-seed gourd	carcarB168
Carg03940	Silver-seed gourd	carcarB239
Carg03940	Silver-seed gourd	carcarB558
Carg03940	Silver-seed gourd	carcarB572
Carg03940	Cucumber (Gy14) v2	carcgybB0960
Carg03940	Cucumber (Gy14) v1	carcgyB1091
Carg03940	Cucurbita maxima (Rimu)	carcmaB1349
Carg03940	Cucurbita maxima (Rimu)	carcmaB1353
Carg03940	Cucurbita maxima (Rimu)	carcmaB1357