Carg01488-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg01488-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Protein of unknown function (DUF581)
Location	Cucurbita_argyrosperma_scaffold_004 : 1235062 .. 1235625 (-)
Sequence length	417

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGCCGCCGAAGAGGCTATGTATCAAAAGAACCGCCAGCCAGAAGGAGATCCTCTTGGACATCGGAGGCGCCGCCGTGGCAGAACCTCAACAAGTCAAAAATCCAAGCACCGTCTTCGATCACCGCCTTGTCTTCATGCTCTCATCAAGCAACAATCGGAGACATTCCGATGAATTCCCCTGGTCGTCTAACTACCTCCGCGCTTGCTGCCTCTGCCGCCGCTCCCTCGTCGCCGGCCGTGACATTTACATGCACAAGTAAGTAAAGTCCGTTTTCTTTCTTTCATGGAAGTACAGATTCAAGTGATTCCTTTGAATTTTGATCGAAATTCGCCTGGAATCCTTTGAATCGACGTGGTTGATGTGATCGTTGAGTGAAATTGCTGCGATTTTGGGTTGAAACAGGGGAGATAGCGGTTTTTGTAGTGCAGGGTGCCGGGAGCAGCAGATGAATCAGGACGAGGCCAAGGAGAAACGTTCGAGAGTGTCGAAGAAAGGACCGGGACCAACCGCCGTAACGAAAGCCTCCACTATAAATGGGGAGACTGTCGCCGCTACATAG

mRNA sequence

ATGCCGCCGCCGAAGAGGCTATGTATCAAAAGAACCGCCAGCCAGAAGGAGATCCTCTTGGACATCGGAGGCGCCGCCGTGGCAGAACCTCAACAAGTCAAAAATCCAAGCACCGTCTTCGATCACCGCCTTGTCTTCATGCTCTCATCAAGCAACAATCGGAGACATTCCGATGAATTCCCCTGGTCGTCTAACTACCTCCGCGCTTGCTGCCTCTGCCGCCGCTCCCTCGTCGCCGGCCGTGACATTTACATGCACAAGGGAGATAGCGGTTTTTGTAGTGCAGGGTGCCGGGAGCAGCAGATGAATCAGGACGAGGCCAAGGAGAAACGTTCGAGAGTGTCGAAGAAAGGACCGGGACCAACCGCCGTAACGAAAGCCTCCACTATAAATGGGGAGACTGTCGCCGCTACATAG

Coding sequence (CDS)

ATGCCGCCGCCGAAGAGGCTATGTATCAAAAGAACCGCCAGCCAGAAGGAGATCCTCTTGGACATCGGAGGCGCCGCCGTGGCAGAACCTCAACAAGTCAAAAATCCAAGCACCGTCTTCGATCACCGCCTTGTCTTCATGCTCTCATCAAGCAACAATCGGAGACATTCCGATGAATTCCCCTGGTCGTCTAACTACCTCCGCGCTTGCTGCCTCTGCCGCCGCTCCCTCGTCGCCGGCCGTGACATTTACATGCACAAGGGAGATAGCGGTTTTTGTAGTGCAGGGTGCCGGGAGCAGCAGATGAATCAGGACGAGGCCAAGGAGAAACGTTCGAGAGTGTCGAAGAAAGGACCGGGACCAACCGCCGTAACGAAAGCCTCCACTATAAATGGGGAGACTGTCGCCGCTACATAG

Protein sequence

MPPPKRLCIKRTASQKEILLDIGGAAVAEPQQVKNPSTVFDHRLVFMLSSSNNRRHSDEFPWSSNYLRACCLCRRSLVAGRDIYMHKGDSGFCSAGCREQQMNQDEAKEKRSRVSKKGPGPTAVTKASTINGETVAAT

Homology

[Close]

BLAST of Carg01488-RA vs. NCBI nr
Match: XP_022939817.1 (uncharacterized protein LOC111445578 [Cucurbita moschata])

HSP 1 Score: 279.6 bits (714), Expect = 5.6e-72
Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MPPPKRLCIKRTASQKEILLDIGGAAVAEPQQVKNPSTVFDHRLVFMLSSSNNRRHSDEF 60
           MPPPKRLCIKRTASQKEILLDIGGAAVAEPQQVKNPSTVFDHRL+FMLSSSNNRRHSDEF
Sbjct: 1   MPPPKRLCIKRTASQKEILLDIGGAAVAEPQQVKNPSTVFDHRLLFMLSSSNNRRHSDEF 60

Query: 61  PWSSNYLRACCLCRRSLVAGRDIYMHKGDSGFCSAGCREQQMNQDEAKEKRSRVSKKGPG 120
           PWSSNYLRACCLCRRSLVAGRDIYMHKGDSGFCSAGCREQQMNQDEAKEKRSRVSKKGPG
Sbjct: 61  PWSSNYLRACCLCRRSLVAGRDIYMHKGDSGFCSAGCREQQMNQDEAKEKRSRVSKKGPG 120

Query: 121 PTAVTKASTINGETVAAT 139
           PTAVTKASTINGETVAAT
Sbjct: 121 PTAVTKASTINGETVAAT 138

[Close]

BLAST of Carg01488-RA vs. NCBI nr
Match: XP_023549914.1 (uncharacterized protein LOC111808265 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 266.9 bits (681), Expect = 3.7e-68
Identity = 131/138 (94.93%), Postives = 135/138 (97.83%), Query Frame = 0


Query: 1   MPPPKRLCIKRTASQKEILLDIGGAAVAEPQQVKNPSTVFDHRLVFMLSSSNNRRHSDEF 60
           MPPPKRLCIKRTASQKEIL DIGGAAVAEPQQV+NPSTVFDHRL+FMLSSSNNRR+SDEF
Sbjct: 1   MPPPKRLCIKRTASQKEILFDIGGAAVAEPQQVENPSTVFDHRLLFMLSSSNNRRNSDEF 60

Query: 61  PWSSNYLRACCLCRRSLVAGRDIYMHKGDSGFCSAGCREQQMNQDEAKEKRSRVSKKGPG 120
           PWSSNYLR CCLCRRSLVAGRDIYM+KGDSGFCSA CREQQMNQDEAKEKRSRVSKKGPG
Sbjct: 61  PWSSNYLRVCCLCRRSLVAGRDIYMYKGDSGFCSAECREQQMNQDEAKEKRSRVSKKGPG 120

Query: 121 PTAVTKASTINGETVAAT 139
           PTAVTKASTINGETVAAT
Sbjct: 121 PTAVTKASTINGETVAAT 138

[Close]

BLAST of Carg01488-RA vs. NCBI nr
Match: XP_022993346.1 (uncharacterized protein LOC111489385 [Cucurbita maxima])

HSP 1 Score: 221.9 bits (564), Expect = 1.4e-54
Identity = 106/123 (86.18%), Postives = 115/123 (93.50%), Query Frame = 0


Query: 1   MPPPKRLCIKRTASQKEILLDIGGAAVAEPQQVKNPSTVFDHRLVFMLSSSNNRRHSDEF 60
           MPPPKRLCIKRTA QKEIL DIGGAAV EPQQV+NP+T FDHRL+FMLSSSNNRR+SDEF
Sbjct: 1   MPPPKRLCIKRTARQKEILFDIGGAAVVEPQQVENPNTAFDHRLLFMLSSSNNRRNSDEF 60

Query: 61  PWSSNYLRACCLCRRSLVAGRDIYMHKGDSGFCSAGCREQQMNQDEAKEKRSRVSKKGPG 120
           PWSSNYL+ACCL RRSLVAGRDIYM+KG+SGFCSA CR+QQMNQDEAKEKRS+VS KGP 
Sbjct: 61  PWSSNYLQACCLYRRSLVAGRDIYMYKGESGFCSAECRKQQMNQDEAKEKRSKVSTKGPR 120

Query: 121 PTA 124
           PTA
Sbjct: 121 PTA 123

[Close]

BLAST of Carg01488-RA vs. NCBI nr
Match: XP_023547753.1 (uncharacterized protein LOC111806606 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 190.3 bits (482), Expect = 4.5e-45
Identity = 98/137 (71.53%), Postives = 112/137 (81.75%), Query Frame = 0


Query: 2   PPPKRLCIKRTASQKEILLDIGGAAVAEPQQVKNPSTVFDHRLVFMLSSSNNRRHSDEFP 61
           PPPKRL IKR++S+KEIL D     VAEP  +++P+T +DHRL+ MLS  NNRRHSDEFP
Sbjct: 3   PPPKRLPIKRSSSEKEILFD-----VAEPPPIESPNTAYDHRLLSMLSPRNNRRHSDEFP 62

Query: 62  WSSNYLRACCLCRRSLVAGRDIYMHKGDSGFCSAGCREQQMNQDEAKEKRSRVSKKGP-G 121
           WSS +LRACCLCRR LV+GRDIYM+KG+S FCSA CR+QQMNQDEAKEK    SKKGP G
Sbjct: 63  WSSQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQMNQDEAKEK---YSKKGPSG 122

Query: 122 PTAVTKASTINGETVAA 138
           PTAV K S INGETVAA
Sbjct: 123 PTAVGKVSAINGETVAA 131

[Close]

BLAST of Carg01488-RA vs. NCBI nr
Match: XP_008460479.1 (PREDICTED: protein MARD1-like [Cucumis melo])

HSP 1 Score: 189.1 bits (479), Expect = 9.9e-45
Identity = 100/144 (69.44%), Postives = 113/144 (78.47%), Query Frame = 0


Query: 1   MPPPKRLCIKRTASQKEILLDIGGAAVAEPQQVKNP--STVFDHRLVFMLSSSNNRRHSD 60
           MPPP  L IKRT SQKEIL D+GGAAV+E   + NP  S++FDHRL+ MLS  NNRRHSD
Sbjct: 1   MPPPNWLPIKRTTSQKEILFDVGGAAVSE---LDNPTASSLFDHRLLSMLSPRNNRRHSD 60

Query: 61  EFPWSSNYLRACCLCRRSLVAGRDIYMHKGDSGFCSAGCREQQMNQDEAKEKRSRVSKKG 120
           EFPWSS++LRACCLC+R L+AGRDIYM+KG+S FCSA CR+QQMNQDEAKEK    SKKG
Sbjct: 61  EFPWSSHHLRACCLCQRRLLAGRDIYMYKGESAFCSAECRQQQMNQDEAKEKCLTASKKG 120

Query: 121 -----PGPTAVTKASTINGETVAA 138
                  PT VTK S INGETVAA
Sbjct: 121 STAIASAPTTVTKVSAINGETVAA 141

[Close]

BLAST of Carg01488-RA vs. TAIR10
Match: AT1G78020.1 (Protein of unknown function (DUF581))

HSP 1 Score: 94.7 bits (234), Expect = 4.6e-20
Identity = 58/151 (38.41%), Postives = 78/151 (51.66%), Query Frame = 0


Query: 9   IKRTASQKEILLDIGGAAVAEPQQVKNPSTV--------------------FDHRLVFML 68
           I RT S  EI  D+   + +EP   + P+                       D RL+ M+
Sbjct: 11  INRTTSLSEIKFDLNLPSESEPSNQQKPTVASPYGSNGQAVTAAVDQNRGFLDQRLLSMV 70

Query: 69  SSSNN-RRHSDEFPWSSNYLRACCLCRRSLVAGRDIYMHKGDSGFCSAGCREQQMNQDEA 128
           +   N RRHS +F  + ++LR+C LC R LV GRDIYM++GD  FCS+ CR++QM QDE 
Sbjct: 71  TPRGNLRRHSGDFSDAGHFLRSCALCERLLVPGRDIYMYRGDKAFCSSECRQEQMAQDER 130

Query: 129 KEK-RSRVSKKGPGPTAVTKASTINGETVAA 138
           KEK +S    K P  TA  +A    G   AA
Sbjct: 131 KEKGKSAAPAKEPAVTAPARAKPGKGRAAAA 161

[Close]

BLAST of Carg01488-RA vs. TAIR10
Match: AT1G22160.1 (Protein of unknown function (DUF581))

HSP 1 Score: 87.0 bits (214), Expect = 9.6e-18
Identity = 58/141 (41.13%), Postives = 76/141 (53.90%), Query Frame = 0


Query: 9   IKRTASQKEILLDIGGAAVAEPQ----QVKN-------PSTVFDHRLVFMLS-SSNNRRH 68
           IKRT S  EI  D+   +  EP     Q+ N          + D RL+ M+S     RRH
Sbjct: 11  IKRTTSLSEIKFDLNQPSEQEPSDHQIQLVNVDEHRQVHQRLLDQRLLAMVSPRGTQRRH 70

Query: 69  SDEFPWSSNYLRACCLCRRSLVAGRDIYMHKGDSGFCSAGCREQQMNQDEAKEKRSRVSK 128
           S ++  S ++LR+C LC+R LV GRDIYM++GD  FCS  CR+QQ+  DE KEK+    K
Sbjct: 71  SSDY--SEDFLRSCSLCKRLLVHGRDIYMYRGDRAFCSLECRQQQITVDERKEKK----K 130

Query: 129 KGPGPTAVTKASTINGETVAA 138
                T V    T  GE V+A
Sbjct: 131 GSVRSTIVVATGTTTGERVSA 145

[Close]

BLAST of Carg01488-RA vs. TAIR10
Match: AT4G39795.1 (Protein of unknown function (DUF581))

HSP 1 Score: 68.6 bits (166), Expect = 3.5e-12
Identity = 41/111 (36.94%), Postives = 58/111 (52.25%), Query Frame = 0


Query: 9   IKRTASQKEILLDIGGAAVAEPQQVKNPSTV-----FDHRLVFMLSSSNNRRHSDEFPWS 68
           ++RTAS   I +++ G   A      + + V     +  R +  ++   N R        
Sbjct: 11  MQRTASITRITIEVDGDQTAGQDSDVSMTVVDGGENYAQRFLSPVNHQRNERKYGGRSSP 70

Query: 69  SNYLRACCLCRRSLVAGRDIYMHKGDSGFCSAGCREQQMNQDEAKEKRSRV 115
           S++L  C  C+R L  GRDIYM+KGD+ FCS  CREQQM  DE K  R+RV
Sbjct: 71  SSFLVNCGFCKRGLAPGRDIYMYKGDAAFCSIECREQQMEHDEGK-TRNRV 120

[Close]

BLAST of Carg01488-RA vs. TAIR10
Match: AT5G65040.1 (Protein of unknown function (DUF581))

HSP 1 Score: 65.5 bits (158), Expect = 3.0e-11
Identity = 41/111 (36.94%), Postives = 57/111 (51.35%), Query Frame = 0


Query: 9   IKRTASQKEILLDIGGAAVAEPQQVKNPSTVFDHRLVFMLSSSNNRRHSDEFPWSSNYLR 68
           IKRT S K I LD     + +  Q  +  T   H    M+  ++N           ++L+
Sbjct: 11  IKRTTSMKMITLDT--PTIYDASQPSDHLTFHQHPHNPMVVMASN---------YDDFLK 70

Query: 69  ACCLCRRSLVAGRDIYMHKGDSGFCSAGCREQQMNQDEAKEKRSRVSKKGP 120
            C LC RSL   RDIYM++G++ FCS  CRE+Q+  DE K K   V+ K P
Sbjct: 71  TCSLCNRSLCHHRDIYMYRGNNAFCSLECREKQIKLDEKKAKTGFVTSKKP 110

[Close]

BLAST of Carg01488-RA vs. TAIR10
Match: AT4G17670.1 (Protein of unknown function (DUF581))

HSP 1 Score: 60.1 bits (144), Expect = 1.3e-09
Identity = 25/51 (49.02%), Postives = 39/51 (76.47%), Query Frame = 0


Query: 65  NYLRACCLCRRSLVAGRDIYMHKGDSGFCSAGCREQQMNQDEAKEKRSRVS 116
           ++L +C LC++ L   RDI+M++GD+ FCS  CRE+Q+ +DEAKEK+  +S
Sbjct: 75  HFLDSCFLCKKRLGDNRDIFMYRGDTPFCSEECREEQIERDEAKEKKQSLS 125

[Close]

BLAST of Carg01488-RA vs. Swiss-Prot
Match: sp|Q8LGS1|MARD1_ARATH (Protein MARD1 OS=Arabidopsis thaliana OX=3702 GN=MARD1 PE=2 SV=2)

HSP 1 Score: 45.8 bits (107), Expect = 4.4e-04
Identity = 17/44 (38.64%), Postives = 31/44 (70.45%), Query Frame = 0


Query: 63  SSNYLRACCLCRRSLVAGRDIYMHKGDSGFCSAGCREQQMNQDE 107
           + ++L  C  C+++L   +DIY+++G+ GFCS+ CR Q+M  D+
Sbjct: 217 TESFLSRCFTCKKNLDQKQDIYIYRGEKGFCSSECRYQEMLLDQ 260

[Close]

BLAST of Carg01488-RA vs. TrEMBL
Match: tr|A0A1S3CDU6|A0A1S3CDU6_CUCME (protein MARD1-like OS=Cucumis melo OX=3656 GN=LOC103499283 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 6.6e-45
Identity = 100/144 (69.44%), Postives = 113/144 (78.47%), Query Frame = 0


Query: 1   MPPPKRLCIKRTASQKEILLDIGGAAVAEPQQVKNP--STVFDHRLVFMLSSSNNRRHSD 60
           MPPP  L IKRT SQKEIL D+GGAAV+E   + NP  S++FDHRL+ MLS  NNRRHSD
Sbjct: 1   MPPPNWLPIKRTTSQKEILFDVGGAAVSE---LDNPTASSLFDHRLLSMLSPRNNRRHSD 60

Query: 61  EFPWSSNYLRACCLCRRSLVAGRDIYMHKGDSGFCSAGCREQQMNQDEAKEKRSRVSKKG 120
           EFPWSS++LRACCLC+R L+AGRDIYM+KG+S FCSA CR+QQMNQDEAKEK    SKKG
Sbjct: 61  EFPWSSHHLRACCLCQRRLLAGRDIYMYKGESAFCSAECRQQQMNQDEAKEKCLTASKKG 120

Query: 121 -----PGPTAVTKASTINGETVAA 138
                  PT VTK S INGETVAA
Sbjct: 121 STAIASAPTTVTKVSAINGETVAA 141

[Close]

BLAST of Carg01488-RA vs. TrEMBL
Match: tr|A0A0A0KRL1|A0A0A0KRL1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G396000 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.4e-42
Identity = 96/142 (67.61%), Postives = 109/142 (76.76%), Query Frame = 0


Query: 1   MPPPKRLCIKRTASQKEILLDIGGAAVAEPQQVKNPSTVFDHRLVFMLSSSNNRRHSDEF 60
           MPPP  L IKRT +QKEIL D+GGAAV+E       S++FDHRL+ MLS  N RRHSDEF
Sbjct: 1   MPPPNCLPIKRTTTQKEILFDLGGAAVSELD--IPTSSLFDHRLLSMLSPRNIRRHSDEF 60

Query: 61  PWSSNYLRACCLCRRSLVAGRDIYMHKGDSGFCSAGCREQQMNQDEAKEKRSRVSKKG-- 120
           PWSS+YLRACCLC+R L+AGRDIYM+KG+S FCSA CR+QQMNQDEAKEK    SKKG  
Sbjct: 61  PWSSHYLRACCLCQRRLLAGRDIYMYKGESAFCSAECRQQQMNQDEAKEKCLTASKKGST 120

Query: 121 ---PGPTAVTKASTINGETVAA 138
                PTAV K S +NGETVAA
Sbjct: 121 AVASAPTAVAKVSAMNGETVAA 140

[Close]

BLAST of Carg01488-RA vs. TrEMBL
Match: tr|F6H0V4|F6H0V4_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_18s0001g05020 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.5e-20
Identity = 63/115 (54.78%), Postives = 76/115 (66.09%), Query Frame = 0


Query: 23  GGAAVAEPQQVKNPSTVFDHRLVFMLSSSNNRRHSDEFPWSSNYLRACCLCRRSLVAGRD 82
           GG    +P  V      FDHR +  +S  N RR+S +F  +S++LRACCLC+R LV+GRD
Sbjct: 99  GGDPYRQPSGVDGYG--FDHRFLSAVSPRNPRRYSADFVDNSHFLRACCLCKRRLVSGRD 158

Query: 83  IYMHKGDSGFCSAGCREQQMNQDEAKEKRSRVSKKGPGPTAVTKASTINGETVAA 138
           IYM++GDS FCS  CR+QQMNQDE KEK S  SKK    TA T  S   GETVAA
Sbjct: 159 IYMYRGDSAFCSLECRQQQMNQDERKEKCSLASKK--EATASTAGS--EGETVAA 207

[Close]

BLAST of Carg01488-RA vs. TrEMBL
Match: tr|A0A2R6RNR0|A0A2R6RNR0_ACTCH (Uncharacterized protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc04931 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.2e-19
Identity = 64/135 (47.41%), Postives = 84/135 (62.22%), Query Frame = 0


Query: 9   IKRTASQKEILLD--IGGAAVAEPQQVKNPSTVFDHRLVFM--LSSSNNRRHSDEFPWSS 68
           +KRT S  E  LD  +GGA+  +P          D RLV    +S+ N+RR+S +F  ++
Sbjct: 11  MKRTTSMTEFTLDVSVGGASSYQPSDPFGGQ--LDQRLVAAAGVSARNHRRNSVDFNETA 70

Query: 69  NYLRACCLCRRSLVAGRDIYMHKGDSGFCSAGCREQQMNQDEAKEKRSRVSKKGPGPTAV 128
           N+LRAC LC+R L  GRDIYM+KGDS FCS  CR+QQMNQDE +EK S  SK+       
Sbjct: 71  NFLRACSLCKRRLTPGRDIYMYKGDSAFCSLECRQQQMNQDERREKCSVASKRESAHAVS 130

Query: 129 TKASTIN--GETVAA 138
           T +  ++  GETVAA
Sbjct: 131 TGSDAVSTEGETVAA 143

[Close]

BLAST of Carg01488-RA vs. TrEMBL
Match: tr|A0A2R6Q0Q9|A0A2R6Q0Q9_ACTCH (Uncharacterized protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc23964 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.6e-19
Identity = 67/137 (48.91%), Postives = 86/137 (62.77%), Query Frame = 0


Query: 9   IKRTASQKEILLD--IGGAAVAEPQQVKNP-STVFDHRLVFM--LSSSNNRRHSDEFPWS 68
           +KRT S  E  LD  +GG   A P    +P     D RLV    +S  N+RR+S +F  +
Sbjct: 11  MKRTTSMTEFTLDLSVGG---APPHHPSDPFGGQLDQRLVAAAGVSPRNHRRNSADFKET 70

Query: 69  SNYLRACCLCRRSLVAGRDIYMHKGDSGFCSAGCREQQMNQDEAKEKRSRVSKK---GPG 128
           +N+LRAC LC+R L+ GRDIYM+KGDS FCS  CR+QQMNQDE +EK S  SK+     G
Sbjct: 71  ANFLRACSLCKRRLIPGRDIYMYKGDSAFCSLECRQQQMNQDERREKCSVASKRESPHAG 130

Query: 129 PTAVTKASTINGETVAA 138
           P A + A +  GET+AA
Sbjct: 131 P-AGSDAGSAEGETMAA 143

The following BLAST results are available for this feature:

BLAST of Carg01488-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022939817.1	5.6e-72	99.28	uncharacterized protein LOC111445578 [Cucurbita moschata]	[more]
XP_023549914.1	3.7e-68	94.93	uncharacterized protein LOC111808265 [Cucurbita pepo subsp. pepo]	[more]
XP_022993346.1	1.4e-54	86.18	uncharacterized protein LOC111489385 [Cucurbita maxima]	[more]
XP_023547753.1	4.5e-45	71.53	uncharacterized protein LOC111806606 [Cucurbita pepo subsp. pepo]	[more]
XP_008460479.1	9.9e-45	69.44	PREDICTED: protein MARD1-like [Cucumis melo]	[more]

BLAST of Carg01488-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT1G78020.1	4.6e-20	38.41	Protein of unknown function (DUF581)	[more]
AT1G22160.1	9.6e-18	41.13	Protein of unknown function (DUF581)	[more]
AT4G39795.1	3.5e-12	36.94	Protein of unknown function (DUF581)	[more]
AT5G65040.1	3.0e-11	36.94	Protein of unknown function (DUF581)	[more]
AT4G17670.1	1.3e-09	49.02	Protein of unknown function (DUF581)	[more]

BLAST of Carg01488-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8LGS1\|MARD1_ARATH	4.4e-04	38.64	Protein MARD1 OS=Arabidopsis thaliana OX=3702 GN=MARD1 PE=2 SV=2	[more]

BLAST of Carg01488-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CDU6\|A0A1S3CDU6_CUCME	6.6e-45	69.44	protein MARD1-like OS=Cucumis melo OX=3656 GN=LOC103499283 PE=4 SV=1	[more]
tr\|A0A0A0KRL1\|A0A0A0KRL1_CUCSA	1.4e-42	67.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G396000 PE=4 SV=1	[more]
tr\|F6H0V4\|F6H0V4_VITVI	1.5e-20	54.78	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_18s0001g05020 PE=4 SV=...	[more]
tr\|A0A2R6RNR0\|A0A2R6RNR0_ACTCH	1.2e-19	47.41	Uncharacterized protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY0...	[more]
tr\|A0A2R6Q0Q9\|A0A2R6Q0Q9_ACTCH	1.6e-19	48.91	Uncharacterized protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY0...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR007650	Zf-FLZ_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg01488	Carg01488	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg01488-RA.CDS.2	Carg01488-RA.CDS.2	CDS
Carg01488-RA.CDS.1	Carg01488-RA.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg01488-RA.exon.2	Carg01488-RA.exon.2	exon
Carg01488-RA.exon.1	Carg01488-RA.exon.1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg01488-RA	Carg01488-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007650	Zf-FLZ domain	PFAM	PF04570	zf-FLZ	coord: 63..108 e-value: 1.8E-20 score: 72.1
IPR007650	Zf-FLZ domain	PROSITE	PS51795	ZF_FLZ	coord: 65..109 score: 21.304
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..138
None	No IPR available	PANTHER	PTHR33059	FAMILY NOT NAMED	coord: 6..128
None	No IPR available	PANTHER	PTHR33059:SF74	SUBFAMILY NOT NAMED	coord: 6..128