Carg01488 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg01488
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Protein of unknown function (DUF581)
Location	Cucurbita_argyrosperma_scaffold_004 : 1235062 .. 1235625 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGCCGCCGAAGAGGCTATGTATCAAAAGAACCGCCAGCCAGAAGGAGATCCTCTTGGACATCGGAGGCGCCGCCGTGGCAGAACCTCAACAAGTCAAAAATCCAAGCACCGTCTTCGATCACCGCCTTGTCTTCATGCTCTCATCAAGCAACAATCGGAGACATTCCGATGAATTCCCCTGGTCGTCTAACTACCTCCGCGCTTGCTGCCTCTGCCGCCGCTCCCTCGTCGCCGGCCGTGACATTTACATGCACAAGTAAGTAAAGTCCGTTTTCTTTCTTTCATGGAAGTACAGATTCAAGTGATTCCTTTGAATTTTGATCGAAATTCGCCTGGAATCCTTTGAATCGACGTGGTTGATGTGATCGTTGAGTGAAATTGCTGCGATTTTGGGTTGAAACAGGGGAGATAGCGGTTTTTGTAGTGCAGGGTGCCGGGAGCAGCAGATGAATCAGGACGAGGCCAAGGAGAAACGTTCGAGAGTGTCGAAGAAAGGACCGGGACCAACCGCCGTAACGAAAGCCTCCACTATAAATGGGGAGACTGTCGCCGCTACATAG

mRNA sequence

ATGCCGCCGCCGAAGAGGCTATGTATCAAAAGAACCGCCAGCCAGAAGGAGATCCTCTTGGACATCGGAGGCGCCGCCGTGGCAGAACCTCAACAAGTCAAAAATCCAAGCACCGTCTTCGATCACCGCCTTGTCTTCATGCTCTCATCAAGCAACAATCGGAGACATTCCGATGAATTCCCCTGGTCGTCTAACTACCTCCGCGCTTGCTGCCTCTGCCGCCGCTCCCTCGTCGCCGGCCGTGACATTTACATGCACAAGGGAGATAGCGGTTTTTGTAGTGCAGGGTGCCGGGAGCAGCAGATGAATCAGGACGAGGCCAAGGAGAAACGTTCGAGAGTGTCGAAGAAAGGACCGGGACCAACCGCCGTAACGAAAGCCTCCACTATAAATGGGGAGACTGTCGCCGCTACATAG

Coding sequence (CDS)

ATGCCGCCGCCGAAGAGGCTATGTATCAAAAGAACCGCCAGCCAGAAGGAGATCCTCTTGGACATCGGAGGCGCCGCCGTGGCAGAACCTCAACAAGTCAAAAATCCAAGCACCGTCTTCGATCACCGCCTTGTCTTCATGCTCTCATCAAGCAACAATCGGAGACATTCCGATGAATTCCCCTGGTCGTCTAACTACCTCCGCGCTTGCTGCCTCTGCCGCCGCTCCCTCGTCGCCGGCCGTGACATTTACATGCACAAGGGAGATAGCGGTTTTTGTAGTGCAGGGTGCCGGGAGCAGCAGATGAATCAGGACGAGGCCAAGGAGAAACGTTCGAGAGTGTCGAAGAAAGGACCGGGACCAACCGCCGTAACGAAAGCCTCCACTATAAATGGGGAGACTGTCGCCGCTACATAG

Protein sequence

MPPPKRLCIKRTASQKEILLDIGGAAVAEPQQVKNPSTVFDHRLVFMLSSSNNRRHSDEFPWSSNYLRACCLCRRSLVAGRDIYMHKGDSGFCSAGCREQQMNQDEAKEKRSRVSKKGPGPTAVTKASTINGETVAAT

Homology

[Close]

BLAST of Carg01488 vs. NCBI nr
Match: XP_022939817.1 (uncharacterized protein LOC111445578 [Cucurbita moschata])

HSP 1 Score: 279.6 bits (714), Expect = 5.6e-72
Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MPPPKRLCIKRTASQKEILLDIGGAAVAEPQQVKNPSTVFDHRLVFMLSSSNNRRHSDEF 60
           MPPPKRLCIKRTASQKEILLDIGGAAVAEPQQVKNPSTVFDHRL+FMLSSSNNRRHSDEF
Sbjct: 1   MPPPKRLCIKRTASQKEILLDIGGAAVAEPQQVKNPSTVFDHRLLFMLSSSNNRRHSDEF 60

Query: 61  PWSSNYLRACCLCRRSLVAGRDIYMHKGDSGFCSAGCREQQMNQDEAKEKRSRVSKKGPG 120
           PWSSNYLRACCLCRRSLVAGRDIYMHKGDSGFCSAGCREQQMNQDEAKEKRSRVSKKGPG
Sbjct: 61  PWSSNYLRACCLCRRSLVAGRDIYMHKGDSGFCSAGCREQQMNQDEAKEKRSRVSKKGPG 120

Query: 121 PTAVTKASTINGETVAAT 139
           PTAVTKASTINGETVAAT
Sbjct: 121 PTAVTKASTINGETVAAT 138

[Close]

BLAST of Carg01488 vs. NCBI nr
Match: XP_023549914.1 (uncharacterized protein LOC111808265 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 266.9 bits (681), Expect = 3.7e-68
Identity = 131/138 (94.93%), Postives = 135/138 (97.83%), Query Frame = 0


Query: 1   MPPPKRLCIKRTASQKEILLDIGGAAVAEPQQVKNPSTVFDHRLVFMLSSSNNRRHSDEF 60
           MPPPKRLCIKRTASQKEIL DIGGAAVAEPQQV+NPSTVFDHRL+FMLSSSNNRR+SDEF
Sbjct: 1   MPPPKRLCIKRTASQKEILFDIGGAAVAEPQQVENPSTVFDHRLLFMLSSSNNRRNSDEF 60

Query: 61  PWSSNYLRACCLCRRSLVAGRDIYMHKGDSGFCSAGCREQQMNQDEAKEKRSRVSKKGPG 120
           PWSSNYLR CCLCRRSLVAGRDIYM+KGDSGFCSA CREQQMNQDEAKEKRSRVSKKGPG
Sbjct: 61  PWSSNYLRVCCLCRRSLVAGRDIYMYKGDSGFCSAECREQQMNQDEAKEKRSRVSKKGPG 120

Query: 121 PTAVTKASTINGETVAAT 139
           PTAVTKASTINGETVAAT
Sbjct: 121 PTAVTKASTINGETVAAT 138

[Close]

BLAST of Carg01488 vs. NCBI nr
Match: XP_022993346.1 (uncharacterized protein LOC111489385 [Cucurbita maxima])

HSP 1 Score: 221.9 bits (564), Expect = 1.4e-54
Identity = 106/123 (86.18%), Postives = 115/123 (93.50%), Query Frame = 0


Query: 1   MPPPKRLCIKRTASQKEILLDIGGAAVAEPQQVKNPSTVFDHRLVFMLSSSNNRRHSDEF 60
           MPPPKRLCIKRTA QKEIL DIGGAAV EPQQV+NP+T FDHRL+FMLSSSNNRR+SDEF
Sbjct: 1   MPPPKRLCIKRTARQKEILFDIGGAAVVEPQQVENPNTAFDHRLLFMLSSSNNRRNSDEF 60

Query: 61  PWSSNYLRACCLCRRSLVAGRDIYMHKGDSGFCSAGCREQQMNQDEAKEKRSRVSKKGPG 120
           PWSSNYL+ACCL RRSLVAGRDIYM+KG+SGFCSA CR+QQMNQDEAKEKRS+VS KGP 
Sbjct: 61  PWSSNYLQACCLYRRSLVAGRDIYMYKGESGFCSAECRKQQMNQDEAKEKRSKVSTKGPR 120

Query: 121 PTA 124
           PTA
Sbjct: 121 PTA 123

[Close]

BLAST of Carg01488 vs. NCBI nr
Match: XP_023547753.1 (uncharacterized protein LOC111806606 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 190.3 bits (482), Expect = 4.5e-45
Identity = 98/137 (71.53%), Postives = 112/137 (81.75%), Query Frame = 0


Query: 2   PPPKRLCIKRTASQKEILLDIGGAAVAEPQQVKNPSTVFDHRLVFMLSSSNNRRHSDEFP 61
           PPPKRL IKR++S+KEIL D     VAEP  +++P+T +DHRL+ MLS  NNRRHSDEFP
Sbjct: 3   PPPKRLPIKRSSSEKEILFD-----VAEPPPIESPNTAYDHRLLSMLSPRNNRRHSDEFP 62

Query: 62  WSSNYLRACCLCRRSLVAGRDIYMHKGDSGFCSAGCREQQMNQDEAKEKRSRVSKKGP-G 121
           WSS +LRACCLCRR LV+GRDIYM+KG+S FCSA CR+QQMNQDEAKEK    SKKGP G
Sbjct: 63  WSSQHLRACCLCRRRLVSGRDIYMYKGESAFCSAECRQQQMNQDEAKEK---YSKKGPSG 122

Query: 122 PTAVTKASTINGETVAA 138
           PTAV K S INGETVAA
Sbjct: 123 PTAVGKVSAINGETVAA 131

[Close]

BLAST of Carg01488 vs. NCBI nr
Match: XP_008460479.1 (PREDICTED: protein MARD1-like [Cucumis melo])

HSP 1 Score: 189.1 bits (479), Expect = 9.9e-45
Identity = 100/144 (69.44%), Postives = 113/144 (78.47%), Query Frame = 0


Query: 1   MPPPKRLCIKRTASQKEILLDIGGAAVAEPQQVKNP--STVFDHRLVFMLSSSNNRRHSD 60
           MPPP  L IKRT SQKEIL D+GGAAV+E   + NP  S++FDHRL+ MLS  NNRRHSD
Sbjct: 1   MPPPNWLPIKRTTSQKEILFDVGGAAVSE---LDNPTASSLFDHRLLSMLSPRNNRRHSD 60

Query: 61  EFPWSSNYLRACCLCRRSLVAGRDIYMHKGDSGFCSAGCREQQMNQDEAKEKRSRVSKKG 120
           EFPWSS++LRACCLC+R L+AGRDIYM+KG+S FCSA CR+QQMNQDEAKEK    SKKG
Sbjct: 61  EFPWSSHHLRACCLCQRRLLAGRDIYMYKGESAFCSAECRQQQMNQDEAKEKCLTASKKG 120

Query: 121 -----PGPTAVTKASTINGETVAA 138
                  PT VTK S INGETVAA
Sbjct: 121 STAIASAPTTVTKVSAINGETVAA 141

[Close]

BLAST of Carg01488 vs. TAIR10
Match: AT1G78020.1 (Protein of unknown function (DUF581))

HSP 1 Score: 94.7 bits (234), Expect = 4.6e-20
Identity = 58/151 (38.41%), Postives = 78/151 (51.66%), Query Frame = 0


Query: 9   IKRTASQKEILLDIGGAAVAEPQQVKNPSTV--------------------FDHRLVFML 68
           I RT S  EI  D+   + +EP   + P+                       D RL+ M+
Sbjct: 11  INRTTSLSEIKFDLNLPSESEPSNQQKPTVASPYGSNGQAVTAAVDQNRGFLDQRLLSMV 70

Query: 69  SSSNN-RRHSDEFPWSSNYLRACCLCRRSLVAGRDIYMHKGDSGFCSAGCREQQMNQDEA 128
           +   N RRHS +F  + ++LR+C LC R LV GRDIYM++GD  FCS+ CR++QM QDE 
Sbjct: 71  TPRGNLRRHSGDFSDAGHFLRSCALCERLLVPGRDIYMYRGDKAFCSSECRQEQMAQDER 130

Query: 129 KEK-RSRVSKKGPGPTAVTKASTINGETVAA 138
           KEK +S    K P  TA  +A    G   AA
Sbjct: 131 KEKGKSAAPAKEPAVTAPARAKPGKGRAAAA 161

[Close]

BLAST of Carg01488 vs. TAIR10
Match: AT1G22160.1 (Protein of unknown function (DUF581))

HSP 1 Score: 87.0 bits (214), Expect = 9.6e-18
Identity = 58/141 (41.13%), Postives = 76/141 (53.90%), Query Frame = 0


Query: 9   IKRTASQKEILLDIGGAAVAEPQ----QVKN-------PSTVFDHRLVFMLS-SSNNRRH 68
           IKRT S  EI  D+   +  EP     Q+ N          + D RL+ M+S     RRH
Sbjct: 11  IKRTTSLSEIKFDLNQPSEQEPSDHQIQLVNVDEHRQVHQRLLDQRLLAMVSPRGTQRRH 70

Query: 69  SDEFPWSSNYLRACCLCRRSLVAGRDIYMHKGDSGFCSAGCREQQMNQDEAKEKRSRVSK 128
           S ++  S ++LR+C LC+R LV GRDIYM++GD  FCS  CR+QQ+  DE KEK+    K
Sbjct: 71  SSDY--SEDFLRSCSLCKRLLVHGRDIYMYRGDRAFCSLECRQQQITVDERKEKK----K 130

Query: 129 KGPGPTAVTKASTINGETVAA 138
                T V    T  GE V+A
Sbjct: 131 GSVRSTIVVATGTTTGERVSA 145

[Close]

BLAST of Carg01488 vs. TAIR10
Match: AT4G39795.1 (Protein of unknown function (DUF581))

HSP 1 Score: 68.6 bits (166), Expect = 3.5e-12
Identity = 41/111 (36.94%), Postives = 58/111 (52.25%), Query Frame = 0


Query: 9   IKRTASQKEILLDIGGAAVAEPQQVKNPSTV-----FDHRLVFMLSSSNNRRHSDEFPWS 68
           ++RTAS   I +++ G   A      + + V     +  R +  ++   N R        
Sbjct: 11  MQRTASITRITIEVDGDQTAGQDSDVSMTVVDGGENYAQRFLSPVNHQRNERKYGGRSSP 70

Query: 69  SNYLRACCLCRRSLVAGRDIYMHKGDSGFCSAGCREQQMNQDEAKEKRSRV 115
           S++L  C  C+R L  GRDIYM+KGD+ FCS  CREQQM  DE K  R+RV
Sbjct: 71  SSFLVNCGFCKRGLAPGRDIYMYKGDAAFCSIECREQQMEHDEGK-TRNRV 120

[Close]

BLAST of Carg01488 vs. TAIR10
Match: AT5G65040.1 (Protein of unknown function (DUF581))

HSP 1 Score: 65.5 bits (158), Expect = 3.0e-11
Identity = 41/111 (36.94%), Postives = 57/111 (51.35%), Query Frame = 0


Query: 9   IKRTASQKEILLDIGGAAVAEPQQVKNPSTVFDHRLVFMLSSSNNRRHSDEFPWSSNYLR 68
           IKRT S K I LD     + +  Q  +  T   H    M+  ++N           ++L+
Sbjct: 11  IKRTTSMKMITLDT--PTIYDASQPSDHLTFHQHPHNPMVVMASN---------YDDFLK 70

Query: 69  ACCLCRRSLVAGRDIYMHKGDSGFCSAGCREQQMNQDEAKEKRSRVSKKGP 120
            C LC RSL   RDIYM++G++ FCS  CRE+Q+  DE K K   V+ K P
Sbjct: 71  TCSLCNRSLCHHRDIYMYRGNNAFCSLECREKQIKLDEKKAKTGFVTSKKP 110

[Close]

BLAST of Carg01488 vs. TAIR10
Match: AT4G17670.1 (Protein of unknown function (DUF581))

HSP 1 Score: 60.1 bits (144), Expect = 1.3e-09
Identity = 25/51 (49.02%), Postives = 39/51 (76.47%), Query Frame = 0


Query: 65  NYLRACCLCRRSLVAGRDIYMHKGDSGFCSAGCREQQMNQDEAKEKRSRVS 116
           ++L +C LC++ L   RDI+M++GD+ FCS  CRE+Q+ +DEAKEK+  +S
Sbjct: 75  HFLDSCFLCKKRLGDNRDIFMYRGDTPFCSEECREEQIERDEAKEKKQSLS 125

[Close]

BLAST of Carg01488 vs. Swiss-Prot
Match: sp|Q8LGS1|MARD1_ARATH (Protein MARD1 OS=Arabidopsis thaliana OX=3702 GN=MARD1 PE=2 SV=2)

HSP 1 Score: 45.8 bits (107), Expect = 4.4e-04
Identity = 17/44 (38.64%), Postives = 31/44 (70.45%), Query Frame = 0


Query: 63  SSNYLRACCLCRRSLVAGRDIYMHKGDSGFCSAGCREQQMNQDE 107
           + ++L  C  C+++L   +DIY+++G+ GFCS+ CR Q+M  D+
Sbjct: 217 TESFLSRCFTCKKNLDQKQDIYIYRGEKGFCSSECRYQEMLLDQ 260

[Close]

BLAST of Carg01488 vs. TrEMBL
Match: tr|A0A1S3CDU6|A0A1S3CDU6_CUCME (protein MARD1-like OS=Cucumis melo OX=3656 GN=LOC103499283 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 6.6e-45
Identity = 100/144 (69.44%), Postives = 113/144 (78.47%), Query Frame = 0


Query: 1   MPPPKRLCIKRTASQKEILLDIGGAAVAEPQQVKNP--STVFDHRLVFMLSSSNNRRHSD 60
           MPPP  L IKRT SQKEIL D+GGAAV+E   + NP  S++FDHRL+ MLS  NNRRHSD
Sbjct: 1   MPPPNWLPIKRTTSQKEILFDVGGAAVSE---LDNPTASSLFDHRLLSMLSPRNNRRHSD 60

Query: 61  EFPWSSNYLRACCLCRRSLVAGRDIYMHKGDSGFCSAGCREQQMNQDEAKEKRSRVSKKG 120
           EFPWSS++LRACCLC+R L+AGRDIYM+KG+S FCSA CR+QQMNQDEAKEK    SKKG
Sbjct: 61  EFPWSSHHLRACCLCQRRLLAGRDIYMYKGESAFCSAECRQQQMNQDEAKEKCLTASKKG 120

Query: 121 -----PGPTAVTKASTINGETVAA 138
                  PT VTK S INGETVAA
Sbjct: 121 STAIASAPTTVTKVSAINGETVAA 141

[Close]

BLAST of Carg01488 vs. TrEMBL
Match: tr|A0A0A0KRL1|A0A0A0KRL1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G396000 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.4e-42
Identity = 96/142 (67.61%), Postives = 109/142 (76.76%), Query Frame = 0


Query: 1   MPPPKRLCIKRTASQKEILLDIGGAAVAEPQQVKNPSTVFDHRLVFMLSSSNNRRHSDEF 60
           MPPP  L IKRT +QKEIL D+GGAAV+E       S++FDHRL+ MLS  N RRHSDEF
Sbjct: 1   MPPPNCLPIKRTTTQKEILFDLGGAAVSELD--IPTSSLFDHRLLSMLSPRNIRRHSDEF 60

Query: 61  PWSSNYLRACCLCRRSLVAGRDIYMHKGDSGFCSAGCREQQMNQDEAKEKRSRVSKKG-- 120
           PWSS+YLRACCLC+R L+AGRDIYM+KG+S FCSA CR+QQMNQDEAKEK    SKKG  
Sbjct: 61  PWSSHYLRACCLCQRRLLAGRDIYMYKGESAFCSAECRQQQMNQDEAKEKCLTASKKGST 120

Query: 121 ---PGPTAVTKASTINGETVAA 138
                PTAV K S +NGETVAA
Sbjct: 121 AVASAPTAVAKVSAMNGETVAA 140

[Close]

BLAST of Carg01488 vs. TrEMBL
Match: tr|F6H0V4|F6H0V4_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_18s0001g05020 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.5e-20
Identity = 63/115 (54.78%), Postives = 76/115 (66.09%), Query Frame = 0


Query: 23  GGAAVAEPQQVKNPSTVFDHRLVFMLSSSNNRRHSDEFPWSSNYLRACCLCRRSLVAGRD 82
           GG    +P  V      FDHR +  +S  N RR+S +F  +S++LRACCLC+R LV+GRD
Sbjct: 99  GGDPYRQPSGVDGYG--FDHRFLSAVSPRNPRRYSADFVDNSHFLRACCLCKRRLVSGRD 158

Query: 83  IYMHKGDSGFCSAGCREQQMNQDEAKEKRSRVSKKGPGPTAVTKASTINGETVAA 138
           IYM++GDS FCS  CR+QQMNQDE KEK S  SKK    TA T  S   GETVAA
Sbjct: 159 IYMYRGDSAFCSLECRQQQMNQDERKEKCSLASKK--EATASTAGS--EGETVAA 207

[Close]

BLAST of Carg01488 vs. TrEMBL
Match: tr|A0A2R6RNR0|A0A2R6RNR0_ACTCH (Uncharacterized protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc04931 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.2e-19
Identity = 64/135 (47.41%), Postives = 84/135 (62.22%), Query Frame = 0


Query: 9   IKRTASQKEILLD--IGGAAVAEPQQVKNPSTVFDHRLVFM--LSSSNNRRHSDEFPWSS 68
           +KRT S  E  LD  +GGA+  +P          D RLV    +S+ N+RR+S +F  ++
Sbjct: 11  MKRTTSMTEFTLDVSVGGASSYQPSDPFGGQ--LDQRLVAAAGVSARNHRRNSVDFNETA 70

Query: 69  NYLRACCLCRRSLVAGRDIYMHKGDSGFCSAGCREQQMNQDEAKEKRSRVSKKGPGPTAV 128
           N+LRAC LC+R L  GRDIYM+KGDS FCS  CR+QQMNQDE +EK S  SK+       
Sbjct: 71  NFLRACSLCKRRLTPGRDIYMYKGDSAFCSLECRQQQMNQDERREKCSVASKRESAHAVS 130

Query: 129 TKASTIN--GETVAA 138
           T +  ++  GETVAA
Sbjct: 131 TGSDAVSTEGETVAA 143

[Close]

BLAST of Carg01488 vs. TrEMBL
Match: tr|A0A2R6Q0Q9|A0A2R6Q0Q9_ACTCH (Uncharacterized protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc23964 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.6e-19
Identity = 67/137 (48.91%), Postives = 86/137 (62.77%), Query Frame = 0


Query: 9   IKRTASQKEILLD--IGGAAVAEPQQVKNP-STVFDHRLVFM--LSSSNNRRHSDEFPWS 68
           +KRT S  E  LD  +GG   A P    +P     D RLV    +S  N+RR+S +F  +
Sbjct: 11  MKRTTSMTEFTLDLSVGG---APPHHPSDPFGGQLDQRLVAAAGVSPRNHRRNSADFKET 70

Query: 69  SNYLRACCLCRRSLVAGRDIYMHKGDSGFCSAGCREQQMNQDEAKEKRSRVSKK---GPG 128
           +N+LRAC LC+R L+ GRDIYM+KGDS FCS  CR+QQMNQDE +EK S  SK+     G
Sbjct: 71  ANFLRACSLCKRRLIPGRDIYMYKGDSAFCSLECRQQQMNQDERREKCSVASKRESPHAG 130

Query: 129 PTAVTKASTINGETVAA 138
           P A + A +  GET+AA
Sbjct: 131 P-AGSDAGSAEGETMAA 143

The following BLAST results are available for this feature:

BLAST of Carg01488 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022939817.1	5.6e-72	99.28	uncharacterized protein LOC111445578 [Cucurbita moschata]	[more]
XP_023549914.1	3.7e-68	94.93	uncharacterized protein LOC111808265 [Cucurbita pepo subsp. pepo]	[more]
XP_022993346.1	1.4e-54	86.18	uncharacterized protein LOC111489385 [Cucurbita maxima]	[more]
XP_023547753.1	4.5e-45	71.53	uncharacterized protein LOC111806606 [Cucurbita pepo subsp. pepo]	[more]
XP_008460479.1	9.9e-45	69.44	PREDICTED: protein MARD1-like [Cucumis melo]	[more]

BLAST of Carg01488 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G78020.1	4.6e-20	38.41	Protein of unknown function (DUF581)	[more]
AT1G22160.1	9.6e-18	41.13	Protein of unknown function (DUF581)	[more]
AT4G39795.1	3.5e-12	36.94	Protein of unknown function (DUF581)	[more]
AT5G65040.1	3.0e-11	36.94	Protein of unknown function (DUF581)	[more]
AT4G17670.1	1.3e-09	49.02	Protein of unknown function (DUF581)	[more]

BLAST of Carg01488 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8LGS1\|MARD1_ARATH	4.4e-04	38.64	Protein MARD1 OS=Arabidopsis thaliana OX=3702 GN=MARD1 PE=2 SV=2	[more]

BLAST of Carg01488 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CDU6\|A0A1S3CDU6_CUCME	6.6e-45	69.44	protein MARD1-like OS=Cucumis melo OX=3656 GN=LOC103499283 PE=4 SV=1	[more]
tr\|A0A0A0KRL1\|A0A0A0KRL1_CUCSA	1.4e-42	67.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G396000 PE=4 SV=1	[more]
tr\|F6H0V4\|F6H0V4_VITVI	1.5e-20	54.78	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_18s0001g05020 PE=4 SV=...	[more]
tr\|A0A2R6RNR0\|A0A2R6RNR0_ACTCH	1.2e-19	47.41	Uncharacterized protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY0...	[more]
tr\|A0A2R6Q0Q9\|A0A2R6Q0Q9_ACTCH	1.6e-19	48.91	Uncharacterized protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY0...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007650	Zf-FLZ_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01488-RA	Carg01488-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007650	Zf-FLZ domain	PFAM	PF04570	zf-FLZ	coord: 63..108 e-value: 1.8E-20 score: 72.1
IPR007650	Zf-FLZ domain	PROSITE	PS51795	ZF_FLZ	coord: 65..109 score: 21.304
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..138
None	No IPR available	PANTHER	PTHR33059	FAMILY NOT NAMED	coord: 6..128
None	No IPR available	PANTHER	PTHR33059:SF74	SUBFAMILY NOT NAMED	coord: 6..128

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg01488	Cla002144	Watermelon (97103) v1	carwmB0829
Carg01488	Cla023131	Watermelon (97103) v1	carwmB0833
Carg01488	Csa5G396000	Cucumber (Chinese Long) v2	carcuB0845
Carg01488	Csa4G378780	Cucumber (Chinese Long) v2	carcuB0841
Carg01488	MELO3C010420	Melon (DHL92) v3.5.1	carmeB0826
Carg01488	MELO3C022791	Melon (DHL92) v3.5.1	carmeB0822
Carg01488	ClCG03G009030	Watermelon (Charleston Gray)	carwcgB0802
Carg01488	ClCG11G015380	Watermelon (Charleston Gray)	carwcgB0799
Carg01488	CSPI04G18340	Wild cucumber (PI 183967)	carcpiB0861
Carg01488	CSPI05G14490	Wild cucumber (PI 183967)	carcpiB0865
Carg01488	Cucsa.034480	Cucumber (Gy14) v1	carcgyB0941
Carg01488	CmaCh15G007200	Cucurbita maxima (Rimu)	carcmaB1148
Carg01488	CmaCh04G023170	Cucurbita maxima (Rimu)	carcmaB1150
Carg01488	CmaCh01G014180	Cucurbita maxima (Rimu)	carcmaB1149
Carg01488	CmoCh15G007400	Cucurbita moschata (Rifu)	carcmoB1118
Carg01488	CmoCh01G014680	Cucurbita moschata (Rifu)	carcmoB1119
Carg01488	CmoCh04G024230	Cucurbita moschata (Rifu)	carcmoB1121
Carg01488	Lsi09G009690	Bottle gourd (USVL1VR-Ls)	carlsiB754
Carg01488	Lsi04G023500	Bottle gourd (USVL1VR-Ls)	carlsiB757
Carg01488	Cp4.1LG02g03450	Cucurbita pepo (Zucchini)	carcpeB1160
Carg01488	Cp4.1LG01g20110	Cucurbita pepo (Zucchini)	carcpeB1158
Carg01488	Cp4.1LG13g04990	Cucurbita pepo (Zucchini)	carcpeB1157
Carg01488	CsGy4G017430	Cucumber (Gy14) v2	carcgybB0815
Carg01488	CsGy5G014450	Cucumber (Gy14) v2	carcgybB0819
Carg01488	MELO3C022791.2	Melon (DHL92) v3.6.1	carmedB0833
Carg01488	CsaV3_5G023590	Cucumber (Chinese Long) v3	carcucB0869
Carg01488	CsaV3_4G028720	Cucumber (Chinese Long) v3	carcucB0865
Carg01488	Cla97C11G221400	Watermelon (97103) v2	carwmbB0860
Carg01488	Cla97C03G060210	Watermelon (97103) v2	carwmbB0861
Carg01488	Bhi12G001112	Wax gourd	carwgoB0962
Carg01488	Bhi09G002201	Wax gourd	carwgoB0969

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg01488	Carg18245	Silver-seed gourd	carcarB500
Carg01488	Carg00365	Silver-seed gourd	carcarB568

The following block(s) are covering this gene:


Gene	Organism	Block
Carg01488	Watermelon (97103) v1	carwmB0828