CSPI07G08750.1 (mRNA) Wild cucumber (PI 183967)

Overview
NameCSPI07G08750.1
TypemRNA
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 6584495 .. 6584767 (-)
Sequence length273
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCGTTTTAGTGGTTGGAACCACCACCGTTCAATCGTTTTCCTTTCCGAGCCCAACGTCAACGATCTCGATTCACACTAGGGGTGCGTTTAGTTCGCAAGTAGTGGAGCTTGGACTAGTTTTGTATGGACACTATCATCAAGACTGCGTCAGCGGTGGTGTTGATATCCACCTTGCGCCGCTTGACTCGTCGATAATCCCCAACCACACACGGTCCTTGCCTTCTTTTGTCTCAGTCGCGTCATCCATCCGTTACTCCAGTACCAAATAA

mRNA sequence

ATGTTCGTTTTAGTGGTTGGAACCACCACCGTTCAATCGTTTTCCTTTCCGAGCCCAACGTCAACGATCTCGATTCACACTAGGGGTGCGTTTAGTTCGCAAGTAGTGGAGCTTGGACTAGTTTTGTATGGACACTATCATCAAGACTGCGTCAGCGGTGGTGTTGATATCCACCTTGCGCCGCTTGACTCGTCGATAATCCCCAACCACACACGGTCCTTGCCTTCTTTTGTCTCAGTCGCGTCATCCATCCGTTACTCCAGTACCAAATAA

Coding sequence (CDS)

ATGTTCGTTTTAGTGGTTGGAACCACCACCGTTCAATCGTTTTCCTTTCCGAGCCCAACGTCAACGATCTCGATTCACACTAGGGGTGCGTTTAGTTCGCAAGTAGTGGAGCTTGGACTAGTTTTGTATGGACACTATCATCAAGACTGCGTCAGCGGTGGTGTTGATATCCACCTTGCGCCGCTTGACTCGTCGATAATCCCCAACCACACACGGTCCTTGCCTTCTTTTGTCTCAGTCGCGTCATCCATCCGTTACTCCAGTACCAAATAA
Homology
[Close]
BLAST of CSPI07G08750.1 vs. TrEMBL
Match: A0A0A0K564_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G160010 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.2e-41
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 1 

Query: 1  MFVLVVGTTTVQSFSFPSPTSTISIHTRGAFSSQVVELGLVLYGHYHQDCVSGGVDIHLA 60
          MFVLVVGTTTVQSFSFPSPTSTISIHTRGAFSSQVVELGLVLYGHYHQDCVSGGVDIHLA
Sbjct: 1  MFVLVVGTTTVQSFSFPSPTSTISIHTRGAFSSQVVELGLVLYGHYHQDCVSGGVDIHLA 60

Query: 61 PLDSSIIPNHTRSLPSFVSVASSIRYSSTK 91
          PLDSSIIPNHTRSLPSFVSVASSIRYSSTK
Sbjct: 61 PLDSSIIPNHTRSLPSFVSVASSIRYSSTK 90

[Close]
BLAST of CSPI07G08750.1 vs. NCBI nr
Match: gi|700188831|gb|KGN44064.1| (hypothetical protein Csa_7G160010 [Cucumis sativus])

HSP 1 Score: 176.8 bits (447), Expect = 1.7e-41
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 1 

Query: 1  MFVLVVGTTTVQSFSFPSPTSTISIHTRGAFSSQVVELGLVLYGHYHQDCVSGGVDIHLA 60
          MFVLVVGTTTVQSFSFPSPTSTISIHTRGAFSSQVVELGLVLYGHYHQDCVSGGVDIHLA
Sbjct: 1  MFVLVVGTTTVQSFSFPSPTSTISIHTRGAFSSQVVELGLVLYGHYHQDCVSGGVDIHLA 60

Query: 61 PLDSSIIPNHTRSLPSFVSVASSIRYSSTK 91
          PLDSSIIPNHTRSLPSFVSVASSIRYSSTK
Sbjct: 61 PLDSSIIPNHTRSLPSFVSVASSIRYSSTK 90

The following BLAST results are available for this feature:
BLAST of CSPI07G08750.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G08750.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K564_CUCSA1.2e-41100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G160010 PE=4 SV=1[more]
BLAST of CSPI07G08750.1 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G08750.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188831|gb|KGN44064.1|1.7e-41100.00hypothetical protein Csa_7G160010 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CSPI07G08750CSPI07G08750gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CSPI07G08750.1CSPI07G08750.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CSPI07G08750.1.cds1CSPI07G08750.1.cds1CDS