CSPI07G08750 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G08750
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 6584495 .. 6584767 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCGTTTTAGTGGTTGGAACCACCACCGTTCAATCGTTTTCCTTTCCGAGCCCAACGTCAACGATCTCGATTCACACTAGGGGTGCGTTTAGTTCGCAAGTAGTGGAGCTTGGACTAGTTTTGTATGGACACTATCATCAAGACTGCGTCAGCGGTGGTGTTGATATCCACCTTGCGCCGCTTGACTCGTCGATAATCCCCAACCACACACGGTCCTTGCCTTCTTTTGTCTCAGTCGCGTCATCCATCCGTTACTCCAGTACCAAATAA

mRNA sequence

ATGTTCGTTTTAGTGGTTGGAACCACCACCGTTCAATCGTTTTCCTTTCCGAGCCCAACGTCAACGATCTCGATTCACACTAGGGGTGCGTTTAGTTCGCAAGTAGTGGAGCTTGGACTAGTTTTGTATGGACACTATCATCAAGACTGCGTCAGCGGTGGTGTTGATATCCACCTTGCGCCGCTTGACTCGTCGATAATCCCCAACCACACACGGTCCTTGCCTTCTTTTGTCTCAGTCGCGTCATCCATCCGTTACTCCAGTACCAAATAA

Coding sequence (CDS)

ATGTTCGTTTTAGTGGTTGGAACCACCACCGTTCAATCGTTTTCCTTTCCGAGCCCAACGTCAACGATCTCGATTCACACTAGGGGTGCGTTTAGTTCGCAAGTAGTGGAGCTTGGACTAGTTTTGTATGGACACTATCATCAAGACTGCGTCAGCGGTGGTGTTGATATCCACCTTGCGCCGCTTGACTCGTCGATAATCCCCAACCACACACGGTCCTTGCCTTCTTTTGTCTCAGTCGCGTCATCCATCCGTTACTCCAGTACCAAATAA
Homology
[Close]
BLAST of CSPI07G08750 vs. TrEMBL
Match: A0A0A0K564_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G160010 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.2e-41
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 1 

Query: 1  MFVLVVGTTTVQSFSFPSPTSTISIHTRGAFSSQVVELGLVLYGHYHQDCVSGGVDIHLA 60
          MFVLVVGTTTVQSFSFPSPTSTISIHTRGAFSSQVVELGLVLYGHYHQDCVSGGVDIHLA
Sbjct: 1  MFVLVVGTTTVQSFSFPSPTSTISIHTRGAFSSQVVELGLVLYGHYHQDCVSGGVDIHLA 60

Query: 61 PLDSSIIPNHTRSLPSFVSVASSIRYSSTK 91
          PLDSSIIPNHTRSLPSFVSVASSIRYSSTK
Sbjct: 61 PLDSSIIPNHTRSLPSFVSVASSIRYSSTK 90

[Close]
BLAST of CSPI07G08750 vs. NCBI nr
Match: gi|700188831|gb|KGN44064.1| (hypothetical protein Csa_7G160010 [Cucumis sativus])

HSP 1 Score: 176.8 bits (447), Expect = 1.7e-41
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 1 

Query: 1  MFVLVVGTTTVQSFSFPSPTSTISIHTRGAFSSQVVELGLVLYGHYHQDCVSGGVDIHLA 60
          MFVLVVGTTTVQSFSFPSPTSTISIHTRGAFSSQVVELGLVLYGHYHQDCVSGGVDIHLA
Sbjct: 1  MFVLVVGTTTVQSFSFPSPTSTISIHTRGAFSSQVVELGLVLYGHYHQDCVSGGVDIHLA 60

Query: 61 PLDSSIIPNHTRSLPSFVSVASSIRYSSTK 91
          PLDSSIIPNHTRSLPSFVSVASSIRYSSTK
Sbjct: 61 PLDSSIIPNHTRSLPSFVSVASSIRYSSTK 90

The following BLAST results are available for this feature:
BLAST of CSPI07G08750 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G08750 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K564_CUCSA1.2e-41100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G160010 PE=4 SV=1[more]
BLAST of CSPI07G08750 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G08750 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188831|gb|KGN44064.1|1.7e-41100.00hypothetical protein Csa_7G160010 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G08750.1CSPI07G08750.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G08750CsaV3_7G018380Cucumber (Chinese Long) v3cpicucB418
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G08750Cucurbita pepo (Zucchini)cpecpiB592
CSPI07G08750Cucurbita pepo (Zucchini)cpecpiB799
CSPI07G08750Bottle gourd (USVL1VR-Ls)cpilsiB527
CSPI07G08750Melon (DHL92) v3.6.1cpimedB537
CSPI07G08750Cucumber (Gy14) v2cgybcpiB334
CSPI07G08750Silver-seed gourdcarcpiB0920
CSPI07G08750Silver-seed gourdcarcpiB0945
CSPI07G08750Cucumber (Chinese Long) v3cpicucB414
CSPI07G08750Watermelon (97103) v2cpiwmbB593
CSPI07G08750Wax gourdcpiwgoB713
CSPI07G08750Cucurbita maxima (Rimu)cmacpiB042
CSPI07G08750Cucurbita maxima (Rimu)cmacpiB506
CSPI07G08750Cucurbita moschata (Rifu)cmocpiB032
CSPI07G08750Cucurbita moschata (Rifu)cmocpiB496
CSPI07G08750Cucumber (Chinese Long) v2cpicuB354
CSPI07G08750Melon (DHL92) v3.5.1cpimeB533
CSPI07G08750Watermelon (Charleston Gray)cpiwcgB549
CSPI07G08750Watermelon (97103) v1cpiwmB581