CSPI07G06960.1 (mRNA) Wild cucumber (PI 183967)

Overview
NameCSPI07G06960.1
TypemRNA
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 5086153 .. 5086378 (+)
Sequence length159
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGGTGTTGGGTTTTGATTGGTGGGTTAGTGAGAAACAGCTCCGCCGCGTGAATGGTGGTGGTGGGGAGGCGGTGGGTACCCACCACCGTTCACATAACTAACAAAAATAGCTTTCTTGTTTGCCCGGAACCGGTGAACTTAGAGAACACACTGAGAACTGAGAAGAGAGGGTTTTGGACAGTCAAGTTTTTGCCTCTGAAGTGGGACCCAAACGTGGAATGA

mRNA sequence

ATGTGGGTGTTGGGTTTTGATTGGTGGGTTAGTGAGAAACAGCTCCGCCGCGTGAATGGTGGTGGTGGGGAGGCGGTGGAGAACACACTGAGAACTGAGAAGAGAGGGTTTTGGACAGTCAAGTTTTTGCCTCTGAAGTGGGACCCAAACGTGGAATGA

Coding sequence (CDS)

ATGTGGGTGTTGGGTTTTGATTGGTGGGTTAGTGAGAAACAGCTCCGCCGCGTGAATGGTGGTGGTGGGGAGGCGGTGGAGAACACACTGAGAACTGAGAAGAGAGGGTTTTGGACAGTCAAGTTTTTGCCTCTGAAGTGGGACCCAAACGTGGAATGA
Homology
[Close]
BLAST of CSPI07G06960.1 vs. TrEMBL
Match: A0A0A0K2G2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071490 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 2.3e-24
Identity = 51/52 (98.08%), Postives = 51/52 (98.08%), Query Frame = 1 

Query: 1  MWVLGFDWWVSEKQLRRVNGGGGEAVENTLRTEKRGFWTVKFLPLKWDPNVE 53
          MWVLGFDWWVSEKQLRRVNGGGGEAVENTLRTEKRGFWTVKFLP KWDPNVE
Sbjct: 1  MWVLGFDWWVSEKQLRRVNGGGGEAVENTLRTEKRGFWTVKFLPQKWDPNVE 52

[Close]
BLAST of CSPI07G06960.1 vs. NCBI nr
Match: gi|700188627|gb|KGN43860.1| (hypothetical protein Csa_7G071490 [Cucumis sativus])

HSP 1 Score: 118.6 bits (296), Expect = 3.3e-24
Identity = 51/52 (98.08%), Postives = 51/52 (98.08%), Query Frame = 1 

Query: 1  MWVLGFDWWVSEKQLRRVNGGGGEAVENTLRTEKRGFWTVKFLPLKWDPNVE 53
          MWVLGFDWWVSEKQLRRVNGGGGEAVENTLRTEKRGFWTVKFLP KWDPNVE
Sbjct: 1  MWVLGFDWWVSEKQLRRVNGGGGEAVENTLRTEKRGFWTVKFLPQKWDPNVE 52

The following BLAST results are available for this feature:
BLAST of CSPI07G06960.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G06960.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K2G2_CUCSA2.3e-2498.08Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071490 PE=4 SV=1[more]
BLAST of CSPI07G06960.1 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G06960.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188627|gb|KGN43860.1|3.3e-2498.08hypothetical protein Csa_7G071490 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CSPI07G06960CSPI07G06960gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CSPI07G06960.1CSPI07G06960.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CSPI07G06960.1.cds1CSPI07G06960.1.cds1CDS
CSPI07G06960.1.cds2CSPI07G06960.1.cds2CDS