CSPI07G06960 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G06960
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 5086153 .. 5086378 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGGTGTTGGGTTTTGATTGGTGGGTTAGTGAGAAACAGCTCCGCCGCGTGAATGGTGGTGGTGGGGAGGCGGTGGGTACCCACCACCGTTCACATAACTAACAAAAATAGCTTTCTTGTTTGCCCGGAACCGGTGAACTTAGAGAACACACTGAGAACTGAGAAGAGAGGGTTTTGGACAGTCAAGTTTTTGCCTCTGAAGTGGGACCCAAACGTGGAATGA

mRNA sequence

ATGTGGGTGTTGGGTTTTGATTGGTGGGTTAGTGAGAAACAGCTCCGCCGCGTGAATGGTGGTGGTGGGGAGGCGGTGGAGAACACACTGAGAACTGAGAAGAGAGGGTTTTGGACAGTCAAGTTTTTGCCTCTGAAGTGGGACCCAAACGTGGAATGA

Coding sequence (CDS)

ATGTGGGTGTTGGGTTTTGATTGGTGGGTTAGTGAGAAACAGCTCCGCCGCGTGAATGGTGGTGGTGGGGAGGCGGTGGAGAACACACTGAGAACTGAGAAGAGAGGGTTTTGGACAGTCAAGTTTTTGCCTCTGAAGTGGGACCCAAACGTGGAATGA
Homology
[Close]
BLAST of CSPI07G06960 vs. TrEMBL
Match: A0A0A0K2G2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071490 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 2.3e-24
Identity = 51/52 (98.08%), Postives = 51/52 (98.08%), Query Frame = 1 

Query: 1  MWVLGFDWWVSEKQLRRVNGGGGEAVENTLRTEKRGFWTVKFLPLKWDPNVE 53
          MWVLGFDWWVSEKQLRRVNGGGGEAVENTLRTEKRGFWTVKFLP KWDPNVE
Sbjct: 1  MWVLGFDWWVSEKQLRRVNGGGGEAVENTLRTEKRGFWTVKFLPQKWDPNVE 52

[Close]
BLAST of CSPI07G06960 vs. NCBI nr
Match: gi|700188627|gb|KGN43860.1| (hypothetical protein Csa_7G071490 [Cucumis sativus])

HSP 1 Score: 118.6 bits (296), Expect = 3.3e-24
Identity = 51/52 (98.08%), Postives = 51/52 (98.08%), Query Frame = 1 

Query: 1  MWVLGFDWWVSEKQLRRVNGGGGEAVENTLRTEKRGFWTVKFLPLKWDPNVE 53
          MWVLGFDWWVSEKQLRRVNGGGGEAVENTLRTEKRGFWTVKFLP KWDPNVE
Sbjct: 1  MWVLGFDWWVSEKQLRRVNGGGGEAVENTLRTEKRGFWTVKFLPQKWDPNVE 52

The following BLAST results are available for this feature:
BLAST of CSPI07G06960 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G06960 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K2G2_CUCSA2.3e-2498.08Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071490 PE=4 SV=1[more]
BLAST of CSPI07G06960 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G06960 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188627|gb|KGN43860.1|3.3e-2498.08hypothetical protein Csa_7G071490 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G06960.1CSPI07G06960.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G06960Csa7G071490Cucumber (Chinese Long) v2cpicuB354
CSPI07G06960CsaV3_7G007940Cucumber (Chinese Long) v3cpicucB415
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G06960Watermelon (97103) v2cpiwmbB542
CSPI07G06960Watermelon (97103) v2cpiwmbB554
CSPI07G06960Watermelon (97103) v2cpiwmbB567
CSPI07G06960Watermelon (97103) v2cpiwmbB568
CSPI07G06960Watermelon (97103) v2cpiwmbB580
CSPI07G06960Wax gourdcpiwgoB684
CSPI07G06960Wax gourdcpiwgoB659
CSPI07G06960Wax gourdcpiwgoB672
CSPI07G06960Wax gourdcpiwgoB689
CSPI07G06960Wax gourdcpiwgoB711
CSPI07G06960Wild cucumber (PI 183967)cpicpiB091
CSPI07G06960Wild cucumber (PI 183967)cpicpiB169
CSPI07G06960Wild cucumber (PI 183967)cpicpiB170
CSPI07G06960Cucumber (Gy14) v1cgycpiB336
CSPI07G06960Cucumber (Gy14) v1cgycpiB525
CSPI07G06960Cucumber (Gy14) v1cgycpiB582
CSPI07G06960Cucurbita maxima (Rimu)cmacpiB143
CSPI07G06960Cucurbita maxima (Rimu)cmacpiB351
CSPI07G06960Cucurbita maxima (Rimu)cmacpiB534
CSPI07G06960Cucurbita maxima (Rimu)cmacpiB786
CSPI07G06960Cucurbita moschata (Rifu)cmocpiB136
CSPI07G06960Cucurbita moschata (Rifu)cmocpiB344
CSPI07G06960Cucurbita moschata (Rifu)cmocpiB491
CSPI07G06960Cucurbita moschata (Rifu)cmocpiB525
CSPI07G06960Cucurbita moschata (Rifu)cmocpiB777
CSPI07G06960Cucumber (Chinese Long) v2cpicuB333
CSPI07G06960Cucumber (Chinese Long) v2cpicuB347
CSPI07G06960Melon (DHL92) v3.5.1cpimeB538
CSPI07G06960Melon (DHL92) v3.5.1cpimeB557
CSPI07G06960Melon (DHL92) v3.5.1cpimeB569
CSPI07G06960Watermelon (Charleston Gray)cpiwcgB561
CSPI07G06960Watermelon (Charleston Gray)cpiwcgB576
CSPI07G06960Watermelon (Charleston Gray)cpiwcgB587
CSPI07G06960Watermelon (Charleston Gray)cpiwcgB599
CSPI07G06960Watermelon (97103) v1cpiwmB594
CSPI07G06960Watermelon (97103) v1cpiwmB596
CSPI07G06960Watermelon (97103) v1cpiwmB609
CSPI07G06960Watermelon (97103) v1cpiwmB623
CSPI07G06960Cucurbita pepo (Zucchini)cpecpiB258
CSPI07G06960Cucurbita pepo (Zucchini)cpecpiB470
CSPI07G06960Cucurbita pepo (Zucchini)cpecpiB697
CSPI07G06960Cucurbita pepo (Zucchini)cpecpiB804
CSPI07G06960Bottle gourd (USVL1VR-Ls)cpilsiB534
CSPI07G06960Bottle gourd (USVL1VR-Ls)cpilsiB536
CSPI07G06960Bottle gourd (USVL1VR-Ls)cpilsiB537
CSPI07G06960Bottle gourd (USVL1VR-Ls)cpilsiB550
CSPI07G06960Melon (DHL92) v3.6.1cpimedB558
CSPI07G06960Melon (DHL92) v3.6.1cpimedB523
CSPI07G06960Melon (DHL92) v3.6.1cpimedB542
CSPI07G06960Melon (DHL92) v3.6.1cpimedB554
CSPI07G06960Cucumber (Gy14) v2cgybcpiB088
CSPI07G06960Cucumber (Gy14) v2cgybcpiB199
CSPI07G06960Cucumber (Gy14) v2cgybcpiB332
CSPI07G06960Silver-seed gourdcarcpiB0214
CSPI07G06960Silver-seed gourdcarcpiB0217
CSPI07G06960Silver-seed gourdcarcpiB0329
CSPI07G06960Silver-seed gourdcarcpiB0413
CSPI07G06960Silver-seed gourdcarcpiB0493
CSPI07G06960Silver-seed gourdcarcpiB0810
CSPI07G06960Cucumber (Chinese Long) v3cpicucB386
CSPI07G06960Cucumber (Chinese Long) v3cpicucB404
CSPI07G06960Cucumber (Chinese Long) v3cpicucB405