CSPI06G08370.1 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATCCTCTCTCAGAATTTTCATCCTCTCTAAGAATTAATAATCAATAAGACACGAAAGGCCAAAAATTTTCAAGAGGAAAAAGATGGCCAAGAAAATGATGGCAGTCTTTTTGATGTGCATCGTGGTGGTAGCTACTTTGCAATTTGTCATGGCCAATGAGGAGGATGGAGTGACCAAATATGAGGCCAAATTTGATGCCAAATACAAGTCTTGCTATGAAACTTGTGAGAAGGAATGCCTTAGAAATGACACTAACGGTGAAAGCTTTTGTGAAGTTAAATGTGATGAAGATTGTAGCGAAAAGGAAGCTGCTGGTACGTATTACCATCTTTATAATAATCGTTCACTGTAATTTTTGCATGAATTATGTTAATTTATGATCATAGAAAAAAAAAACCATGTATCAAAATTTTTCATTAGACCACCAAAAAAGAACCACATATAACAAAAATATAAACTAAAATTGTGAATCTAAATACTTGTACGCATTTTTTATTCTTAAATTTTTGGATAAAGTATTATTTATTATATTAATTTTGATTGTTGTTTTTTGTTTTTTACAGATAAATTGCACATCGAATTGCACTGAATGATGGAGAGCAAAAAGAAAAAACACCTCTTGAGAAGGATCAAGTACTAAAATTGTATTGAAATCGAGCTTGTACTTTGATTTTAATATTGAAATTTATAAAATTTTTGGTTTTTGGTGACATTGATATGTGAATCAACCATTGAAACTAATTAACATATATGGGATCGTCACATTCTATAAATCTTATCTACAATGAGAAGATACTACAGGGCGCA ATGGCCAAGAAAATGATGGCAGTCTTTTTGATGTGCATCGTGGTGGTAGCTACTTTGCAATTTGTCATGGCCAATGAGGAGGATGGAGTGACCAAATATGAGGCCAAATTTGATGCCAAATACAAGTCTTGCTATGAAACTTGTGAGAAGGAATGCCTTAGAAATGACACTAACGGTGAAAGCTTTTGTGAAGTTAAATGTGATGAAGATTGTAGCGAAAAGGAAGCTGCTGATAAATTGCACATCGAATTGCACTGA ATGGCCAAGAAAATGATGGCAGTCTTTTTGATGTGCATCGTGGTGGTAGCTACTTTGCAATTTGTCATGGCCAATGAGGAGGATGGAGTGACCAAATATGAGGCCAAATTTGATGCCAAATACAAGTCTTGCTATGAAACTTGTGAGAAGGAATGCCTTAGAAATGACACTAACGGTGAAAGCTTTTGTGAAGTTAAATGTGATGAAGATTGTAGCGAAAAGGAAGCTGCTGATAAATTGCACATCGAATTGCACTGA
BLAST of CSPI06G08370.1 vs. Swiss-Prot
Match: ALL6_OLEEU (Major pollen allergen Ole e 6 OS=Olea europaea GN=OLE6 PE=1 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 1.7e-06 Identity = 23/43 (53.49%), Postives = 32/43 (74.42%), Query Frame = 1
BLAST of CSPI06G08370.1 vs. TrEMBL
Match: A0A0A0K9Z9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106720 PE=4 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 2.1e-40 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 1
BLAST of CSPI06G08370.1 vs. TrEMBL
Match: A0A0A0KPA7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G222980 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 4.2e-28 Identity = 68/85 (80.00%), Postives = 75/85 (88.24%), Query Frame = 1
BLAST of CSPI06G08370.1 vs. TrEMBL
Match: A0A0A0KFH6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G102480 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 6.7e-26 Identity = 57/85 (67.06%), Postives = 71/85 (83.53%), Query Frame = 1
BLAST of CSPI06G08370.1 vs. TrEMBL
Match: A0A0A0KCI6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106710 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 3.3e-25 Identity = 57/80 (71.25%), Postives = 67/80 (83.75%), Query Frame = 1
BLAST of CSPI06G08370.1 vs. TrEMBL
Match: A0A0A0KDP7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G102490 PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 3.7e-24 Identity = 60/82 (73.17%), Postives = 67/82 (81.71%), Query Frame = 1
BLAST of CSPI06G08370.1 vs. NCBI nr
Match: gi|700191316|gb|KGN46520.1| (hypothetical protein Csa_6G106720 [Cucumis sativus]) HSP 1 Score: 172.6 bits (436), Expect = 3.1e-40 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 1
BLAST of CSPI06G08370.1 vs. NCBI nr
Match: gi|659114221|ref|XP_008456958.1| (PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo]) HSP 1 Score: 136.3 bits (342), Expect = 2.4e-29 Identity = 67/85 (78.82%), Postives = 76/85 (89.41%), Query Frame = 1
BLAST of CSPI06G08370.1 vs. NCBI nr
Match: gi|449457470|ref|XP_004146471.1| (PREDICTED: major pollen allergen Ole e 6-like [Cucumis sativus]) HSP 1 Score: 131.7 bits (330), Expect = 6.0e-28 Identity = 68/85 (80.00%), Postives = 75/85 (88.24%), Query Frame = 1
BLAST of CSPI06G08370.1 vs. NCBI nr
Match: gi|700191282|gb|KGN46486.1| (hypothetical protein Csa_6G102480 [Cucumis sativus]) HSP 1 Score: 124.4 bits (311), Expect = 9.6e-26 Identity = 57/85 (67.06%), Postives = 71/85 (83.53%), Query Frame = 1
BLAST of CSPI06G08370.1 vs. NCBI nr
Match: gi|700191315|gb|KGN46519.1| (hypothetical protein Csa_6G106710 [Cucumis sativus]) HSP 1 Score: 122.1 bits (305), Expect = 4.8e-25 Identity = 57/80 (71.25%), Postives = 67/80 (83.75%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
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