CSPI06G08370 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI06G08370
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr6 : 7054352 .. 7055158 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCCTCTCTCAGAATTTTCATCCTCTCTAAGAATTAATAATCAATAAGACACGAAAGGCCAAAAATTTTCAAGAGGAAAAAGATGGCCAAGAAAATGATGGCAGTCTTTTTGATGTGCATCGTGGTGGTAGCTACTTTGCAATTTGTCATGGCCAATGAGGAGGATGGAGTGACCAAATATGAGGCCAAATTTGATGCCAAATACAAGTCTTGCTATGAAACTTGTGAGAAGGAATGCCTTAGAAATGACACTAACGGTGAAAGCTTTTGTGAAGTTAAATGTGATGAAGATTGTAGCGAAAAGGAAGCTGCTGGTACGTATTACCATCTTTATAATAATCGTTCACTGTAATTTTTGCATGAATTATGTTAATTTATGATCATAGAAAAAAAAAACCATGTATCAAAATTTTTCATTAGACCACCAAAAAAGAACCACATATAACAAAAATATAAACTAAAATTGTGAATCTAAATACTTGTACGCATTTTTTATTCTTAAATTTTTGGATAAAGTATTATTTATTATATTAATTTTGATTGTTGTTTTTTGTTTTTTACAGATAAATTGCACATCGAATTGCACTGAATGATGGAGAGCAAAAAGAAAAAACACCTCTTGAGAAGGATCAAGTACTAAAATTGTATTGAAATCGAGCTTGTACTTTGATTTTAATATTGAAATTTATAAAATTTTTGGTTTTTGGTGACATTGATATGTGAATCAACCATTGAAACTAATTAACATATATGGGATCGTCACATTCTATAAATCTTATCTACAATGAGAAGATACTACAGGGCGCA

mRNA sequence

ATGGCCAAGAAAATGATGGCAGTCTTTTTGATGTGCATCGTGGTGGTAGCTACTTTGCAATTTGTCATGGCCAATGAGGAGGATGGAGTGACCAAATATGAGGCCAAATTTGATGCCAAATACAAGTCTTGCTATGAAACTTGTGAGAAGGAATGCCTTAGAAATGACACTAACGGTGAAAGCTTTTGTGAAGTTAAATGTGATGAAGATTGTAGCGAAAAGGAAGCTGCTGATAAATTGCACATCGAATTGCACTGA

Coding sequence (CDS)

ATGGCCAAGAAAATGATGGCAGTCTTTTTGATGTGCATCGTGGTGGTAGCTACTTTGCAATTTGTCATGGCCAATGAGGAGGATGGAGTGACCAAATATGAGGCCAAATTTGATGCCAAATACAAGTCTTGCTATGAAACTTGTGAGAAGGAATGCCTTAGAAATGACACTAACGGTGAAAGCTTTTGTGAAGTTAAATGTGATGAAGATTGTAGCGAAAAGGAAGCTGCTGATAAATTGCACATCGAATTGCACTGA
Homology
[Close]
BLAST of CSPI06G08370 vs. Swiss-Prot
Match: ALL6_OLEEU (Major pollen allergen Ole e 6 OS=Olea europaea GN=OLE6 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 1.7e-06
Identity = 23/43 (53.49%), Postives = 32/43 (74.42%), Query Frame = 1 

Query: 38 DAKYKSCYETCEKECLRNDTNGESFCEVKCDEDCSEKEAADKL 81
          +A++K CY+TC KEC  +  NG +FCE+KCD DCS K+  +KL
Sbjct: 2  EAQFKECYDTCHKEC-SDKGNGFTFCEMKCDTDCSVKDVKEKL 43

[Close]
BLAST of CSPI06G08370 vs. TrEMBL
Match: A0A0A0K9Z9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106720 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 2.1e-40
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 1 

Query: 1  MAKKMMAVFLMCIVVVATLQFVMANEEDGVTKYEAKFDAKYKSCYETCEKECLRNDTNGE 60
          MAKKMMAVFLMCIVVVATLQFVMANEEDGVTKYEAKFDAKYKSCYETCEKECLRNDTNGE
Sbjct: 1  MAKKMMAVFLMCIVVVATLQFVMANEEDGVTKYEAKFDAKYKSCYETCEKECLRNDTNGE 60

Query: 61 SFCEVKCDEDCSEKEAADKLHIELH 86
          SFCEVKCDEDCSEKEAADKLHIELH
Sbjct: 61 SFCEVKCDEDCSEKEAADKLHIELH 85

[Close]
BLAST of CSPI06G08370 vs. TrEMBL
Match: A0A0A0KPA7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G222980 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 4.2e-28
Identity = 68/85 (80.00%), Postives = 75/85 (88.24%), Query Frame = 1 

Query: 1  MAKKMMAVFLMCIVVVATLQFVMANEEDGVTKYEAKFDAKYKSCYETCEKECLRNDTNGE 60
          MA KM+A+FLMCIVVVA LQF  AN+ED V KYEAKFDAKYKSC+ETCEKECLR  + G+
Sbjct: 1  MANKMIALFLMCIVVVAALQFANANKED-VAKYEAKFDAKYKSCFETCEKECLRYGS-GQ 60

Query: 61 SFCEVKCDEDCSEKEAADKLHIELH 86
          S+CEVKCDEDC EKEAADKLHIELH
Sbjct: 61 SYCEVKCDEDCDEKEAADKLHIELH 83

[Close]
BLAST of CSPI06G08370 vs. TrEMBL
Match: A0A0A0KFH6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G102480 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 6.7e-26
Identity = 57/85 (67.06%), Postives = 71/85 (83.53%), Query Frame = 1 

Query: 1  MAKKMMAVFLMCIVVVATLQFVMANEEDGVTKYEAKFDAKYKSCYETCEKECLRNDTNGE 60
          MAKKMM V L+CIV++A L+F + N E+   KYE+KFDA+YKSCYE+CEKECL N  NG+
Sbjct: 1  MAKKMMGVLLICIVIMAVLEFSIVNGEEKEDKYESKFDARYKSCYESCEKECLTNGKNGQ 60

Query: 61 SFCEVKCDEDCSEKEAADKLHIELH 86
          S+CEVKCDEDC EKE ADKLH+E++
Sbjct: 61 SYCEVKCDEDCDEKEVADKLHVEVN 85

[Close]
BLAST of CSPI06G08370 vs. TrEMBL
Match: A0A0A0KCI6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106710 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 3.3e-25
Identity = 57/80 (71.25%), Postives = 67/80 (83.75%), Query Frame = 1 

Query: 3  KKMMAVFLMCIVVVATLQFVMANEEDGVTKYEAKFDAKYKSCYETCEKECLRNDTNGESF 62
          KKMM V L+CIVV+A L+F + N E+   KYE+KFDAKYK+CYE+CEKECL N  NG+SF
Sbjct: 4  KKMMGVLLICIVVMAALEFSIVNGEEKEDKYESKFDAKYKTCYESCEKECLENGNNGQSF 63

Query: 63 CEVKCDEDCSEKEAADKLHI 83
          CEVKCDEDC EKE+ADKLHI
Sbjct: 64 CEVKCDEDCGEKESADKLHI 83

[Close]
BLAST of CSPI06G08370 vs. TrEMBL
Match: A0A0A0KDP7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G102490 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 3.7e-24
Identity = 60/82 (73.17%), Postives = 67/82 (81.71%), Query Frame = 1 

Query: 1  MAKKMMAVFLMCIVVVATLQFVMANEEDGVTKYEAKFDAKYKSCYETCEKECLRNDTNGE 60
          MAKKMMAVFLMCIVVV +LQF  AN+E  V  YEAKFDAKYK+C+ TCEKEC+    +G 
Sbjct: 1  MAKKMMAVFLMCIVVVTSLQFATANKEYEVASYEAKFDAKYKACFVTCEKECIERG-SGH 60

Query: 61 SFCEVKCDEDCSEKEAADKLHI 83
          S+CEVKCDEDC  KEAADKLHI
Sbjct: 61 SYCEVKCDEDCGAKEAADKLHI 81

[Close]
BLAST of CSPI06G08370 vs. NCBI nr
Match: gi|700191316|gb|KGN46520.1| (hypothetical protein Csa_6G106720 [Cucumis sativus])

HSP 1 Score: 172.6 bits (436), Expect = 3.1e-40
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 1 

Query: 1  MAKKMMAVFLMCIVVVATLQFVMANEEDGVTKYEAKFDAKYKSCYETCEKECLRNDTNGE 60
          MAKKMMAVFLMCIVVVATLQFVMANEEDGVTKYEAKFDAKYKSCYETCEKECLRNDTNGE
Sbjct: 1  MAKKMMAVFLMCIVVVATLQFVMANEEDGVTKYEAKFDAKYKSCYETCEKECLRNDTNGE 60

Query: 61 SFCEVKCDEDCSEKEAADKLHIELH 86
          SFCEVKCDEDCSEKEAADKLHIELH
Sbjct: 61 SFCEVKCDEDCSEKEAADKLHIELH 85

[Close]
BLAST of CSPI06G08370 vs. NCBI nr
Match: gi|659114221|ref|XP_008456958.1| (PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo])

HSP 1 Score: 136.3 bits (342), Expect = 2.4e-29
Identity = 67/85 (78.82%), Postives = 76/85 (89.41%), Query Frame = 1 

Query: 1  MAKKMMAVFLMCIVVVATLQFVMANEEDGVTKYEAKFDAKYKSCYETCEKECLRNDTNGE 60
          MAKKM+A+FLMCIVVVA LQF  AN+ED V KYEAKFDAKYKSC++TCEKECL N  +G+
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENG-SGQ 60

Query: 61 SFCEVKCDEDCSEKEAADKLHIELH 86
          S+CEVKCDEDC+EKE ADKLHIELH
Sbjct: 61 SYCEVKCDEDCNEKEVADKLHIELH 84

[Close]
BLAST of CSPI06G08370 vs. NCBI nr
Match: gi|449457470|ref|XP_004146471.1| (PREDICTED: major pollen allergen Ole e 6-like [Cucumis sativus])

HSP 1 Score: 131.7 bits (330), Expect = 6.0e-28
Identity = 68/85 (80.00%), Postives = 75/85 (88.24%), Query Frame = 1 

Query: 1  MAKKMMAVFLMCIVVVATLQFVMANEEDGVTKYEAKFDAKYKSCYETCEKECLRNDTNGE 60
          MA KM+A+FLMCIVVVA LQF  AN+ED V KYEAKFDAKYKSC+ETCEKECLR  + G+
Sbjct: 1  MANKMIALFLMCIVVVAALQFANANKED-VAKYEAKFDAKYKSCFETCEKECLRYGS-GQ 60

Query: 61 SFCEVKCDEDCSEKEAADKLHIELH 86
          S+CEVKCDEDC EKEAADKLHIELH
Sbjct: 61 SYCEVKCDEDCDEKEAADKLHIELH 83

[Close]
BLAST of CSPI06G08370 vs. NCBI nr
Match: gi|700191282|gb|KGN46486.1| (hypothetical protein Csa_6G102480 [Cucumis sativus])

HSP 1 Score: 124.4 bits (311), Expect = 9.6e-26
Identity = 57/85 (67.06%), Postives = 71/85 (83.53%), Query Frame = 1 

Query: 1  MAKKMMAVFLMCIVVVATLQFVMANEEDGVTKYEAKFDAKYKSCYETCEKECLRNDTNGE 60
          MAKKMM V L+CIV++A L+F + N E+   KYE+KFDA+YKSCYE+CEKECL N  NG+
Sbjct: 1  MAKKMMGVLLICIVIMAVLEFSIVNGEEKEDKYESKFDARYKSCYESCEKECLTNGKNGQ 60

Query: 61 SFCEVKCDEDCSEKEAADKLHIELH 86
          S+CEVKCDEDC EKE ADKLH+E++
Sbjct: 61 SYCEVKCDEDCDEKEVADKLHVEVN 85

[Close]
BLAST of CSPI06G08370 vs. NCBI nr
Match: gi|700191315|gb|KGN46519.1| (hypothetical protein Csa_6G106710 [Cucumis sativus])

HSP 1 Score: 122.1 bits (305), Expect = 4.8e-25
Identity = 57/80 (71.25%), Postives = 67/80 (83.75%), Query Frame = 1 

Query: 3  KKMMAVFLMCIVVVATLQFVMANEEDGVTKYEAKFDAKYKSCYETCEKECLRNDTNGESF 62
          KKMM V L+CIVV+A L+F + N E+   KYE+KFDAKYK+CYE+CEKECL N  NG+SF
Sbjct: 4  KKMMGVLLICIVVMAALEFSIVNGEEKEDKYESKFDAKYKTCYESCEKECLENGNNGQSF 63

Query: 63 CEVKCDEDCSEKEAADKLHI 83
          CEVKCDEDC EKE+ADKLHI
Sbjct: 64 CEVKCDEDCGEKESADKLHI 83

The following BLAST results are available for this feature:
BLAST of CSPI06G08370 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ALL6_OLEEU1.7e-0653.49Major pollen allergen Ole e 6 OS=Olea europaea GN=OLE6 PE=1 SV=1[more]
BLAST of CSPI06G08370 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K9Z9_CUCSA2.1e-40100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106720 PE=4 SV=1[more]
A0A0A0KPA7_CUCSA4.2e-2880.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G222980 PE=4 SV=1[more]
A0A0A0KFH6_CUCSA6.7e-2667.06Uncharacterized protein OS=Cucumis sativus GN=Csa_6G102480 PE=4 SV=1[more]
A0A0A0KCI6_CUCSA3.3e-2571.25Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106710 PE=4 SV=1[more]
A0A0A0KDP7_CUCSA3.7e-2473.17Uncharacterized protein OS=Cucumis sativus GN=Csa_6G102490 PE=4 SV=1[more]
BLAST of CSPI06G08370 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI06G08370 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700191316|gb|KGN46520.1|3.1e-40100.00hypothetical protein Csa_6G106720 [Cucumis sativus][more]
gi|659114221|ref|XP_008456958.1|2.4e-2978.82PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo][more]
gi|449457470|ref|XP_004146471.1|6.0e-2880.00PREDICTED: major pollen allergen Ole e 6-like [Cucumis sativus][more]
gi|700191282|gb|KGN46486.1|9.6e-2667.06hypothetical protein Csa_6G102480 [Cucumis sativus][more]
gi|700191315|gb|KGN46519.1|4.8e-2571.25hypothetical protein Csa_6G106710 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR015333Pollen_allergen_ole-e-6
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G08370.1CSPI06G08370.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015333Pollen allergen ole e 6GENE3DG3DSA:1.10.287.720coord: 39..82
score: 4.6
IPR015333Pollen allergen ole e 6PFAMPF09253Ole-e-6coord: 44..81
score: 4.9
IPR015333Pollen allergen ole e 6unknownSSF111388Pollen allergen ole e 6coord: 38..80
score: 8.76
NoneNo IPR availablePANTHERPTHR35632FAMILY NOT NAMEDcoord: 1..82
score: 1.6

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI06G08370Watermelon (97103) v2cpiwmbB495
CSPI06G08370Wax gourdcpiwgoB539
CSPI06G08370Cucumber (Gy14) v1cgycpiB156
CSPI06G08370Cucurbita maxima (Rimu)cmacpiB932
CSPI06G08370Cucurbita moschata (Rifu)cmocpiB911
CSPI06G08370Cucumber (Chinese Long) v2cpicuB314
CSPI06G08370Watermelon (Charleston Gray)cpiwcgB503
CSPI06G08370Watermelon (97103) v1cpiwmB563
CSPI06G08370Cucurbita pepo (Zucchini)cpecpiB154
CSPI06G08370Cucurbita pepo (Zucchini)cpecpiB332
CSPI06G08370Bottle gourd (USVL1VR-Ls)cpilsiB404
CSPI06G08370Cucumber (Gy14) v2cgybcpiB288
CSPI06G08370Silver-seed gourdcarcpiB0097
CSPI06G08370Cucumber (Chinese Long) v3cpicucB364