CSPI04G26810.1 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTGTTTTTTGGTGGAATTACCCTAAAATGGAAAACAAGCAGAAGATAGAGATGGAGAGGGAGCAGCAGAGGCGAGAAGAATCCAAGAAGATAGAGCAAGAACCGCCGTACTATATTTCTCGGATGCAGCCATTGACAGAATGTGCTTACGGCGGAGGAATGTACGGCACCGACGATAAAGGAGATCAGGACAGCCTGCAGATCAAGAAAGTACCTGCGAGCACAACGCAGAGCGCCGATGGACCAGTTGTAGCGGAAATGAAGCTGAAGCATCCGCCTCCGCCGTCCTCAGGCGACAGAGACATCGATATCACCGGGCAATCGTATTTCCAGTAGCCTGAAAAGCTCGTGAAGGCTTCCCCGGTCCGGTTGCGTATTGTAAATGCGTTTTAATAATGGCGATCGAGAGGTGTAGTTTGTTTATTCGTGTAATTTGGTTCGTTTTCTTTACTCGATTAACGCGTTTCTTGTGGATCTATGAATGATTGAAACAGTTATTTCTAAGAGATTGAGTATACAACTTAACCTAAATTAATATGTAAAATTAGGAGAAAACGAATTCAT ATGGAAAACAAGCAGAAGATAGAGATGGAGAGGGAGCAGCAGAGGCGAGAAGAATCCAAGAAGATAGAGCAAGAACCGCCGTACTATATTTCTCGGATGCAGCCATTGACAGAATGTGCTTACGGCGGAGGAATGTACGGCACCGACGATAAAGGAGATCAGGACAGCCTGCAGATCAAGAAAGTACCTGCGAGCACAACGCAGAGCGCCGATGGACCAGTTGTAGCGGAAATGAAGCTGAAGCATCCGCCTCCGCCGTCCTCAGGCGACAGAGACATCGATATCACCGGGCAATCGTATTTCCAGTAG ATGGAAAACAAGCAGAAGATAGAGATGGAGAGGGAGCAGCAGAGGCGAGAAGAATCCAAGAAGATAGAGCAAGAACCGCCGTACTATATTTCTCGGATGCAGCCATTGACAGAATGTGCTTACGGCGGAGGAATGTACGGCACCGACGATAAAGGAGATCAGGACAGCCTGCAGATCAAGAAAGTACCTGCGAGCACAACGCAGAGCGCCGATGGACCAGTTGTAGCGGAAATGAAGCTGAAGCATCCGCCTCCGCCGTCCTCAGGCGACAGAGACATCGATATCACCGGGCAATCGTATTTCCAGTAG
BLAST of CSPI04G26810.1 vs. TrEMBL
Match: A0A0A0L393_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G658490 PE=4 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 1.0e-49 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1
BLAST of CSPI04G26810.1 vs. TrEMBL
Match: W9R762_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024884 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 3.9e-20 Identity = 63/104 (60.58%), Postives = 75/104 (72.12%), Query Frame = 1
BLAST of CSPI04G26810.1 vs. TrEMBL
Match: W1NWB4_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00366p00014600 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 3.6e-18 Identity = 53/95 (55.79%), Postives = 71/95 (74.74%), Query Frame = 1
BLAST of CSPI04G26810.1 vs. TrEMBL
Match: F6H0B3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g00140 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 2.3e-17 Identity = 51/94 (54.26%), Postives = 67/94 (71.28%), Query Frame = 1
BLAST of CSPI04G26810.1 vs. TrEMBL
Match: A0A022PP97_ERYGU (Uncharacterized protein (Fragment) OS=Erythranthe guttata GN=MIMGU_mgv1a026572mg PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 6.8e-17 Identity = 47/80 (58.75%), Postives = 58/80 (72.50%), Query Frame = 1
BLAST of CSPI04G26810.1 vs. TAIR10
Match: AT5G42290.1 (AT5G42290.1 transcription activator-related) HSP 1 Score: 86.3 bits (212), Expect = 1.2e-17 Identity = 53/110 (48.18%), Postives = 68/110 (61.82%), Query Frame = 1
BLAST of CSPI04G26810.1 vs. NCBI nr
Match: gi|778697864|ref|XP_011654420.1| (PREDICTED: uncharacterized protein LOC105435391 [Cucumis sativus]) HSP 1 Score: 203.8 bits (517), Expect = 1.5e-49 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1
BLAST of CSPI04G26810.1 vs. NCBI nr
Match: gi|659104639|ref|XP_008452943.1| (PREDICTED: uncharacterized protein LOC103493802 [Cucumis melo]) HSP 1 Score: 177.9 bits (450), Expect = 8.8e-42 Identity = 91/102 (89.22%), Postives = 97/102 (95.10%), Query Frame = 1
BLAST of CSPI04G26810.1 vs. NCBI nr
Match: gi|1009133717|ref|XP_015884054.1| (PREDICTED: uncharacterized protein LOC107419769 [Ziziphus jujuba]) HSP 1 Score: 111.3 bits (277), Expect = 1.0e-21 Identity = 62/102 (60.78%), Postives = 75/102 (73.53%), Query Frame = 1
BLAST of CSPI04G26810.1 vs. NCBI nr
Match: gi|698547174|ref|XP_009767948.1| (PREDICTED: uncharacterized protein LOC104219013 [Nicotiana sylvestris]) HSP 1 Score: 105.5 bits (262), Expect = 5.5e-20 Identity = 58/102 (56.86%), Postives = 75/102 (73.53%), Query Frame = 1
BLAST of CSPI04G26810.1 vs. NCBI nr
Match: gi|703092281|ref|XP_010094588.1| (hypothetical protein L484_024884 [Morus notabilis]) HSP 1 Score: 105.5 bits (262), Expect = 5.5e-20 Identity = 63/104 (60.58%), Postives = 75/104 (72.12%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
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