CSPI04G20970.1 (mRNA) Wild cucumber (PI 183967)

Overview
NameCSPI04G20970.1
TypemRNA
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr4 : 19390652 .. 19390843 (+)
Sequence length192
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGCTGAGAATAGAAAACGGCTGGAATAGAAACGTCGACACGTCTCGTCGGAATGCGAACAAAGTCTTAGCTAGTACGGAGGAGACGACTTATTGTGGCTCGGTGTTTCGTCAACGGAACGAAGAGAACGTCGACGTTAGTCTCGACTGGGATTCGTCGGATGGAAACGCATCAGCTCAGGTTGGTTGA

mRNA sequence

ATGCAGCTGAGAATAGAAAACGGCTGGAATAGAAACGTCGACACGTCTCGTCGGAATGCGAACAAAGTCTTAGCTAGTACGGAGGAGACGACTTATTGTGGCTCGGTGTTTCGTCAACGGAACGAAGAGAACGTCGACGTTAGTCTCGACTGGGATTCGTCGGATGGAAACGCATCAGCTCAGGTTGGTTGA

Coding sequence (CDS)

ATGCAGCTGAGAATAGAAAACGGCTGGAATAGAAACGTCGACACGTCTCGTCGGAATGCGAACAAAGTCTTAGCTAGTACGGAGGAGACGACTTATTGTGGCTCGGTGTTTCGTCAACGGAACGAAGAGAACGTCGACGTTAGTCTCGACTGGGATTCGTCGGATGGAAACGCATCAGCTCAGGTTGGTTGA
Homology
[Close]
BLAST of CSPI04G20970.1 vs. TrEMBL
Match: A0A0A0L418_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G571230 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.2e-27
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 1 

Query: 1  MQLRIENGWNRNVDTSRRNANKVLASTEETTYCGSVFRQRNEENVDVSLDWDSSDGNASA 60
          MQLRIENGWNRNVDTSRRNANKVLASTEETTYCGSVFRQRNEENVDVSLDWDSSDGNASA
Sbjct: 1  MQLRIENGWNRNVDTSRRNANKVLASTEETTYCGSVFRQRNEENVDVSLDWDSSDGNASA 60

Query: 61 QVG 64
          QVG
Sbjct: 61 QVG 63

[Close]
BLAST of CSPI04G20970.1 vs. NCBI nr
Match: gi|700199718|gb|KGN54876.1| (hypothetical protein Csa_4G571230 [Cucumis sativus])

HSP 1 Score: 129.8 bits (325), Expect = 1.7e-27
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 1 

Query: 1  MQLRIENGWNRNVDTSRRNANKVLASTEETTYCGSVFRQRNEENVDVSLDWDSSDGNASA 60
          MQLRIENGWNRNVDTSRRNANKVLASTEETTYCGSVFRQRNEENVDVSLDWDSSDGNASA
Sbjct: 1  MQLRIENGWNRNVDTSRRNANKVLASTEETTYCGSVFRQRNEENVDVSLDWDSSDGNASA 60

Query: 61 QVG 64
          QVG
Sbjct: 61 QVG 63

The following BLAST results are available for this feature:
BLAST of CSPI04G20970.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI04G20970.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L418_CUCSA1.2e-27100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G571230 PE=4 SV=1[more]
BLAST of CSPI04G20970.1 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI04G20970.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700199718|gb|KGN54876.1|1.7e-27100.00hypothetical protein Csa_4G571230 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CSPI04G20970CSPI04G20970gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CSPI04G20970.1CSPI04G20970.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CSPI04G20970.1.cds1CSPI04G20970.1.cds1CDS