CSPI04G13240.1 (mRNA) Wild cucumber (PI 183967)

Overview
NameCSPI04G13240.1
TypemRNA
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr4 : 11338281 .. 11338487 (+)
Sequence length207
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAAAATTGAAGGGTACGAGAGTGATCGACCAGAAAACAGCAGGGGAAGGTGGAGATGGCGAAAAAATGAGGTTAACGCCGCTGAACAACCAAATAATTGCAGAAATGGTTGGCCCCAAAAGGAAATGGAAAGAGAAAGAAGAAGGAATGGGCGTGTGTCGGGTTTAGATTGGAACAACAAAAGGGTTAAGAGTCAAAGAAAT

mRNA sequence

ATGGAAAAAATTGAAGGGTACGAGAGTGATCGACCAGAAAACAGCAGGGGAAGGTGGAGATGGCGAAAAAATGAGGTTAACGCCGCTGAACAACCAAATAATTGCAGAAATGGTTGGCCCCAAAAGGAAATGGAAAGAGAAAGAAGAAGGAATGGGCGTGTGTCGGGTTTAGATTGGAACAACAAAAGGGTTAAGAGTCAAAGAAAT

Coding sequence (CDS)

ATGGAAAAAATTGAAGGGTACGAGAGTGATCGACCAGAAAACAGCAGGGGAAGGTGGAGATGGCGAAAAAATGAGGTTAACGCCGCTGAACAACCAAATAATTGCAGAAATGGTTGGCCCCAAAAGGAAATGGAAAGAGAAAGAAGAAGGAATGGGCGTGTGTCGGGTTTAGATTGGAACAACAAAAGGGTTAAGAGTCAAAGAAAT
Homology
[Close]
BLAST of CSPI04G13240.1 vs. TrEMBL
Match: A0A0A0L1S9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G285720 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.1e-31
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1 

Query: 1  MEKIEGYESDRPENSRGRWRWRKNEVNAAEQPNNCRNGWPQKEMERERRRNGRVSGLDWN 60
          MEKIEGYESDRPENSRGRWRWRKNEVNAAEQPNNCRNGWPQKEMERERRRNGRVSGLDWN
Sbjct: 1  MEKIEGYESDRPENSRGRWRWRKNEVNAAEQPNNCRNGWPQKEMERERRRNGRVSGLDWN 60

Query: 61 NKRVKSQRN 70
          NKRVKSQRN
Sbjct: 61 NKRVKSQRN 69

[Close]
BLAST of CSPI04G13240.1 vs. NCBI nr
Match: gi|700198938|gb|KGN54096.1| (hypothetical protein Csa_4G285720 [Cucumis sativus])

HSP 1 Score: 143.3 bits (360), Expect = 1.6e-31
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1 

Query: 1  MEKIEGYESDRPENSRGRWRWRKNEVNAAEQPNNCRNGWPQKEMERERRRNGRVSGLDWN 60
          MEKIEGYESDRPENSRGRWRWRKNEVNAAEQPNNCRNGWPQKEMERERRRNGRVSGLDWN
Sbjct: 1  MEKIEGYESDRPENSRGRWRWRKNEVNAAEQPNNCRNGWPQKEMERERRRNGRVSGLDWN 60

Query: 61 NKRVKSQRN 70
          NKRVKSQRN
Sbjct: 61 NKRVKSQRN 69

The following BLAST results are available for this feature:
BLAST of CSPI04G13240.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI04G13240.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1S9_CUCSA1.1e-31100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G285720 PE=4 SV=1[more]
BLAST of CSPI04G13240.1 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI04G13240.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700198938|gb|KGN54096.1|1.6e-31100.00hypothetical protein Csa_4G285720 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CSPI04G13240CSPI04G13240gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CSPI04G13240.1CSPI04G13240.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CSPI04G13240.mrna.cds.1CSPI04G13240.mrna.cds.1CDS