CSPI03G42050.1 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGATGGAGAGCACTCGAAGGAGTTGGATATTGCGGTTCGTGTTGTTCATTTGGCTTGTGCTCTTTGCCGTAGAGTTCAAGAGGGTTTGCTTGAAAACGGCAATGCTCAGGTTAAGGCCAAGGACGATGATTCTCCGGTGACAATTGCCGGTATTCTTTCTTTGTTTTTGTTGTTTTATCGATGTTCCTTTTCTTATTGTCTGTTGAATGCGTTTTCTTTTAACTTTGAAGTGGGAACTGCATGTTATATGCTTGTGTTTGTTTGGCTTATGGAAAATGTGAGAAAATGAATATATGTAATGTATTTGATACTTTGTTGAGATCAAGAAGACACCATAAAGTCTAACGCTGTCATTGTGGGGTACAGGTTGTTTTCATCCATTATTCTCTGTTTTTGTAATTTAGTTTCCTGA ATGGAGGATGGAGAGCACTCGAAGGAGTTGGATATTGCGGTTCGTGTTGTTCATTTGGCTTGTGCTCTTTGCCGTAGAGTTCAAGAGGGTTTGCTTGAAAACGGCAATGCTCAGGTTAAGGCCAAGGACGATGATTCTCCGGTGACAATTGCCGATCAAGAAGACACCATAAAGTCTAACGCTGTCATTGTGGGGTACAGGTTGTTTTCATCCATTATTCTCTGTTTTTGTAATTTAGTTTCCTGA ATGGAGGATGGAGAGCACTCGAAGGAGTTGGATATTGCGGTTCGTGTTGTTCATTTGGCTTGTGCTCTTTGCCGTAGAGTTCAAGAGGGTTTGCTTGAAAACGGCAATGCTCAGGTTAAGGCCAAGGACGATGATTCTCCGGTGACAATTGCCGATCAAGAAGACACCATAAAGTCTAACGCTGTCATTGTGGGGTACAGGTTGTTTTCATCCATTATTCTCTGTTTTTGTAATTTAGTTTCCTGA
BLAST of CSPI03G42050.1 vs. Swiss-Prot
Match: DPNPH_ARATH (PAP-specific phosphatase HAL2-like OS=Arabidopsis thaliana GN=AHL PE=2 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 1.9e-07 Identity = 28/44 (63.64%), Postives = 33/44 (75.00%), Query Frame = 1
BLAST of CSPI03G42050.1 vs. TrEMBL
Match: A0A0A0LDM4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G851880 PE=4 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 8.0e-37 Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = 1
BLAST of CSPI03G42050.1 vs. TrEMBL
Match: A0A0S3S999_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G038000 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 2.6e-11 Identity = 35/52 (67.31%), Postives = 44/52 (84.62%), Query Frame = 1
BLAST of CSPI03G42050.1 vs. TrEMBL
Match: A0A0L9V3N6_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g033900 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 7.6e-11 Identity = 34/52 (65.38%), Postives = 44/52 (84.62%), Query Frame = 1
BLAST of CSPI03G42050.1 vs. TrEMBL
Match: I1KE06_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G249500 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 9.9e-11 Identity = 35/52 (67.31%), Postives = 43/52 (82.69%), Query Frame = 1
BLAST of CSPI03G42050.1 vs. TrEMBL
Match: V4ULT7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008644mg PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 1.3e-10 Identity = 33/53 (62.26%), Postives = 47/53 (88.68%), Query Frame = 1
BLAST of CSPI03G42050.1 vs. TAIR10
Match: AT5G54390.1 (AT5G54390.1 HAL2-like) HSP 1 Score: 56.2 bits (134), Expect = 1.1e-08 Identity = 28/44 (63.64%), Postives = 33/44 (75.00%), Query Frame = 1
BLAST of CSPI03G42050.1 vs. NCBI nr
Match: gi|700204755|gb|KGN59888.1| (hypothetical protein Csa_3G851880 [Cucumis sativus]) HSP 1 Score: 160.6 bits (405), Expect = 1.2e-36 Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = 1
BLAST of CSPI03G42050.1 vs. NCBI nr
Match: gi|449464776|ref|XP_004150105.1| (PREDICTED: PAP-specific phosphatase HAL2-like [Cucumis sativus]) HSP 1 Score: 104.8 bits (260), Expect = 7.5e-20 Identity = 51/52 (98.08%), Postives = 52/52 (100.00%), Query Frame = 1
BLAST of CSPI03G42050.1 vs. NCBI nr
Match: gi|659109326|ref|XP_008454658.1| (PREDICTED: PAP-specific phosphatase HAL2-like [Cucumis melo]) HSP 1 Score: 103.6 bits (257), Expect = 1.7e-19 Identity = 50/52 (96.15%), Postives = 52/52 (100.00%), Query Frame = 1
BLAST of CSPI03G42050.1 vs. NCBI nr
Match: gi|1009110519|ref|XP_015895939.1| (PREDICTED: PAP-specific phosphatase HAL2-like [Ziziphus jujuba]) HSP 1 Score: 81.3 bits (199), Expect = 8.9e-13 Identity = 37/52 (71.15%), Postives = 45/52 (86.54%), Query Frame = 1
BLAST of CSPI03G42050.1 vs. NCBI nr
Match: gi|470116697|ref|XP_004294514.1| (PREDICTED: PAP-specific phosphatase HAL2-like [Fragaria vesca subsp. vesca]) HSP 1 Score: 80.9 bits (198), Expect = 1.2e-12 Identity = 37/52 (71.15%), Postives = 45/52 (86.54%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
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