CSPI03G28920.1 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTTCGATTTCCCAATTCTCATCTCTCACAAAAATCACAATTCTCTCTAAACCTCAGCTTCAATGTCTTCTCCTTCTTTCTCTCAATCCTTCGACATCTTATCTTCTCCCTCTCCATTTCAATACTCAAAACAGGGTTTAACCTCAGTTTCATACTCTGCAACTTGTCACCAAGCAGCATTTGGATTGACACAGACACAAGAATGCAATTCCAGACATCAAAACAAACAAACCCAAAAAAAGCCCTGTGCTATTCTAGTCCATTGCTTCGGTGGGAACTCCAAATCCAAATGGCAATTCTTTTCCCAAGTTAGAGACTTGTCAAGATGCTTCAGTTTGTACTTACCCAGCACCAACAAAACCAACATGTCGGATGTGTTCCTAGCGATTTGTGTAGGCGAAGGAATAAAAAGATTGGGTGTGGAGAAGCATAGCGTAGTGGGGAAAGGGGATCAACTATGGAGGATACGTGGCATACCGGATGGCTGAGATTTACAAGTGATGATCAAATGGTAGAGCAGCTTACGAAGACAGGAAGGGATATAGTGGATCTTGTACTAGAAACACCACAGCATTTGAAGTTGATTCAAACATATTCACAAAGTTGTTAATATATAAGCATGATCCAAGTTTGTTG ATGTCTTCTCCTTCTTTCTCTCAATCCTTCGACATCTTATCTTCTCCCTCTCCATTTCAATACTCAAAACAGGGTTTAACCTCAGTTTCATACTCTGCAACTTGTCACCAAGCAGCATTTGGATTGACACAGACACAAGAATGCAATTCCAGACATCAAAACAAACAAACCCAAAAAAAGCCCTGTGCTATTCTAGTCCATTGCTTCGGTGGGAACTCCAAATCCAAATGGCAATTCTTTTCCCAAGTTAGAGACTTGTCAAGATGCTTCAGTTTGTACTTACCCAGCACCAACAAAACCAACATGTCGGATGTGTTCCTAGCGATTTGTGTAGGCGAAGGAATAAAAAGATTGGGTGTGGAGAAGCATAGCGTAGTGGGGAAAGGGGATCAACTATGGAGGATACGTGGCATACCGGATGGCTGA ATGTCTTCTCCTTCTTTCTCTCAATCCTTCGACATCTTATCTTCTCCCTCTCCATTTCAATACTCAAAACAGGGTTTAACCTCAGTTTCATACTCTGCAACTTGTCACCAAGCAGCATTTGGATTGACACAGACACAAGAATGCAATTCCAGACATCAAAACAAACAAACCCAAAAAAAGCCCTGTGCTATTCTAGTCCATTGCTTCGGTGGGAACTCCAAATCCAAATGGCAATTCTTTTCCCAAGTTAGAGACTTGTCAAGATGCTTCAGTTTGTACTTACCCAGCACCAACAAAACCAACATGTCGGATGTGTTCCTAGCGATTTGTGTAGGCGAAGGAATAAAAAGATTGGGTGTGGAGAAGCATAGCGTAGTGGGGAAAGGGGATCAACTATGGAGGATACGTGGCATACCGGATGGCTGA
BLAST of CSPI03G28920.1 vs. TrEMBL
Match: B9S5Q5_RICCO (Abhydrolase domain containing, putative OS=Ricinus communis GN=RCOM_0652430 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 2.8e-13 Identity = 39/82 (47.56%), Postives = 57/82 (69.51%), Query Frame = 1
BLAST of CSPI03G28920.1 vs. TrEMBL
Match: M5WXW7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018297mg PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 2.2e-10 Identity = 36/80 (45.00%), Postives = 50/80 (62.50%), Query Frame = 1
BLAST of CSPI03G28920.1 vs. TrEMBL
Match: A0A103YB46_CYNCS (Alpha/beta hydrolase fold-1 OS=Cynara cardunculus var. scolymus GN=Ccrd_015805 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 3.2e-09 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 1
BLAST of CSPI03G28920.1 vs. TrEMBL
Match: A0A068TND9_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00021774001 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 4.2e-09 Identity = 34/76 (44.74%), Postives = 49/76 (64.47%), Query Frame = 1
BLAST of CSPI03G28920.1 vs. TrEMBL
Match: A0A059AHN6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J02811 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 4.2e-09 Identity = 35/75 (46.67%), Postives = 50/75 (66.67%), Query Frame = 1
BLAST of CSPI03G28920.1 vs. TAIR10
Match: AT5G21950.1 (AT5G21950.1 alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 56.6 bits (135), Expect = 1.4e-08 Identity = 30/82 (36.59%), Postives = 51/82 (62.20%), Query Frame = 1
BLAST of CSPI03G28920.1 vs. TAIR10
Match: AT1G72620.1 (AT1G72620.1 alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 50.4 bits (119), Expect = 1.0e-06 Identity = 26/68 (38.24%), Postives = 40/68 (58.82%), Query Frame = 1
BLAST of CSPI03G28920.1 vs. NCBI nr
Match: gi|1000960719|ref|XP_015576092.1| (PREDICTED: lipase 1 [Ricinus communis]) HSP 1 Score: 83.2 bits (204), Expect = 4.1e-13 Identity = 39/82 (47.56%), Postives = 57/82 (69.51%), Query Frame = 1
BLAST of CSPI03G28920.1 vs. NCBI nr
Match: gi|223539402|gb|EEF40992.1| (abhydrolase domain containing, putative [Ricinus communis]) HSP 1 Score: 83.2 bits (204), Expect = 4.1e-13 Identity = 39/82 (47.56%), Postives = 57/82 (69.51%), Query Frame = 1
BLAST of CSPI03G28920.1 vs. NCBI nr
Match: gi|595967525|ref|XP_007217295.1| (hypothetical protein PRUPE_ppa018297mg [Prunus persica]) HSP 1 Score: 73.6 bits (179), Expect = 3.2e-10 Identity = 36/80 (45.00%), Postives = 50/80 (62.50%), Query Frame = 1
BLAST of CSPI03G28920.1 vs. NCBI nr
Match: gi|645243908|ref|XP_008228193.1| (PREDICTED: monoacylglycerol lipase abhd6-B-like [Prunus mume]) HSP 1 Score: 72.4 bits (176), Expect = 7.2e-10 Identity = 36/80 (45.00%), Postives = 49/80 (61.25%), Query Frame = 1
BLAST of CSPI03G28920.1 vs. NCBI nr
Match: gi|645243899|ref|XP_008228189.1| (PREDICTED: monoacylglycerol lipase abhd6-B-like [Prunus mume]) HSP 1 Score: 72.4 bits (176), Expect = 7.2e-10 Identity = 36/80 (45.00%), Postives = 49/80 (61.25%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
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