CSPI02G23870.1 (mRNA) Wild cucumber (PI 183967)

Overview
NameCSPI02G23870.1
TypemRNA
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionCCR4-NOT transcription complex subunit 7
LocationChr2 : 20476119 .. 20477670 (-)
Sequence length825
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCTCTCTCTCTCTCTCGCTCTATCAAACCCTGTTTTCTCTCTGCCGCTCCTCCTCCTCCTCCTCCTCCTCCTCCGCCGCCGTTGACCTCCTTCTACAACTCCCTTCTTCTAGATCTGCCCTTCCCATCTTTCAATTTCACATTTTCAAGGTCAGATCTACTTACCCACTCCCTATTTCTTTTACATCACTTCATTTCTAGGGTTCCACTTAACCCCCTCCTTCTCTTTCAGATCTGTAACCACTTCTTTACTTCCCTTACTCTGGCGTTGGTTTTCCCACGCCCCCGCTTGCTTCTTTTTATATCCCCGTATCTGTTCGCCATATTTTCTTTAACTCTTCGTCGATTTCTCACTCTTATCGAGTTGACCTTGGAGGAATGTCGATTTTACCCAAAGGTGATTCGATTCAAATCCGGGAAGTCTGGAATGCTAATTTGGAAGAGGAGTTTGCGTTAATCCGTGCGATTGTTGATAAATTTAATTACATAGCTATGGATACTGAGTTCCCTGGGGTTGTACTTCGCCCTTTGGGTACTTTCAAGAATATCAATGATTTCAACTACCGGACTCTTAAGGATAATGTTGAGATGTTGAAGTTGATTCAGTTGGGTCTTACTTTCTCTGATGAGGATGGGAATCTCCCAACTTGTGGAACTGATAAGTTTTGCATTTGGCAGTTCAATTTTCGTGAGTTCAATATTGGTAGTGATATTTTTGCTAGTGATTCCATTGAGCTTCTTCGTCAGTGTGGTATTGATTTTCAGAAGAACAATGAAGAGGGTATCGATGTTAATCGTTTTGGTGAGCTTCTTATGTCTTCTGGGGTTGTGTTAAACGATGATGTGAACTGGGTCACGTTTCACAGTGGGTACGATTTTGGTTACTTACTGAAATTACTGACTTGCCGTGGCTTACCCAATGATCAGGCGGGTTTCTTTGAGTTGATCAATGTCTACTTTCCAGTGCTTTATGATATCAAGCATTTGATGAAGTTTTGCAACAGTCTCCACGGTGGGTTGAACAAGCTTGCTGAATTATTAGAAGTTGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTCTGCTTACTGCCTGTACTTTTAGGAAGTTAAGGGATACCTTTTTCAATGGGTCTATACAGAAATACGCAGGTGTTTTGTATGGCCTTGGTGTTGAAAATGGACAGCGTACTAATTGAAGAGAATTACAAAGTGTTTGTAGAAGTGTGAGACATTTAGTTACTTCTGTACAATTTGGCTAAAGCATTGATGATGATTGTAACCGTTTTCAGCTTTCCTGCTCTGTAATAGAAACCTCCGACTGTTTTTTGCAGCTTAGTGGTTTCTTGTAAATTATGTCAGCTAGTGTTTCAATAAGAATTTTATTGACGTTTTTTAGAATGAGTTTCCACTTCTTTTGTGAACTTATATGTTGTTACTAATTCCTTTAGGTTCGTTAATCATGTAAGGCCCTAAAGGTATTTGATATGATACACAATGTTGCCAATAGAACTTATTTCTTTAACAACCGGTTATGTGAATTCTCAG

mRNA sequence

ATGTCGATTTTACCCAAAGGTGATTCGATTCAAATCCGGGAAGTCTGGAATGCTAATTTGGAAGAGGAGTTTGCGTTAATCCGTGCGATTGTTGATAAATTTAATTACATAGCTATGGATACTGAGTTCCCTGGGGTTGTACTTCGCCCTTTGGGTACTTTCAAGAATATCAATGATTTCAACTACCGGACTCTTAAGGATAATGTTGAGATGTTGAAGTTGATTCAGTTGGGTCTTACTTTCTCTGATGAGGATGGGAATCTCCCAACTTGTGGAACTGATAAGTTTTGCATTTGGCAGTTCAATTTTCGTGAGTTCAATATTGGTAGTGATATTTTTGCTAGTGATTCCATTGAGCTTCTTCGTCAGTGTGGTATTGATTTTCAGAAGAACAATGAAGAGGGTATCGATGTTAATCGTTTTGGTGAGCTTCTTATGTCTTCTGGGGTTGTGTTAAACGATGATGTGAACTGGGTCACGTTTCACAGTGGGTACGATTTTGGTTACTTACTGAAATTACTGACTTGCCGTGGCTTACCCAATGATCAGGCGGGTTTCTTTGAGTTGATCAATGTCTACTTTCCAGTGCTTTATGATATCAAGCATTTGATGAAGTTTTGCAACAGTCTCCACGGTGGGTTGAACAAGCTTGCTGAATTATTAGAAGTTGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTCTGCTTACTGCCTGTACTTTTAGGAAGTTAAGGGATACCTTTTTCAATGGGTCTATACAGAAATACGCAGGTGTTTTGTATGGCCTTGGTGTTGAAAATGGACAGCGTACTAATTGA

Coding sequence (CDS)

ATGTCGATTTTACCCAAAGGTGATTCGATTCAAATCCGGGAAGTCTGGAATGCTAATTTGGAAGAGGAGTTTGCGTTAATCCGTGCGATTGTTGATAAATTTAATTACATAGCTATGGATACTGAGTTCCCTGGGGTTGTACTTCGCCCTTTGGGTACTTTCAAGAATATCAATGATTTCAACTACCGGACTCTTAAGGATAATGTTGAGATGTTGAAGTTGATTCAGTTGGGTCTTACTTTCTCTGATGAGGATGGGAATCTCCCAACTTGTGGAACTGATAAGTTTTGCATTTGGCAGTTCAATTTTCGTGAGTTCAATATTGGTAGTGATATTTTTGCTAGTGATTCCATTGAGCTTCTTCGTCAGTGTGGTATTGATTTTCAGAAGAACAATGAAGAGGGTATCGATGTTAATCGTTTTGGTGAGCTTCTTATGTCTTCTGGGGTTGTGTTAAACGATGATGTGAACTGGGTCACGTTTCACAGTGGGTACGATTTTGGTTACTTACTGAAATTACTGACTTGCCGTGGCTTACCCAATGATCAGGCGGGTTTCTTTGAGTTGATCAATGTCTACTTTCCAGTGCTTTATGATATCAAGCATTTGATGAAGTTTTGCAACAGTCTCCACGGTGGGTTGAACAAGCTTGCTGAATTATTAGAAGTTGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTCTGCTTACTGCCTGTACTTTTAGGAAGTTAAGGGATACCTTTTTCAATGGGTCTATACAGAAATACGCAGGTGTTTTGTATGGCCTTGGTGTTGAAAATGGACAGCGTACTAATTGA
Homology
[Close]
BLAST of CSPI02G23870.1 vs. Swiss-Prot
Match: CAF1G_ARATH (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana GN=CAF1-7 PE=2 SV=2)

HSP 1 Score: 448.7 bits (1153), Expect = 4.5e-125
Identity = 207/272 (76.10%), Postives = 240/272 (88.24%), Query Frame = 1 

Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MS+  K DSIQIREVWN NLE E ALIR +VD F ++AMDTEFPG+V RP+GTFK   ++
Sbjct: 1   MSLFLKDDSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEY 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTD-KFCIWQFNFREFNIGSDIFASDSIE 120
           +Y TLK NV +LK+IQLGLTFSDE GNLPTCGTD K+CIWQFNFREF++ SDI+A+DSIE
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIE 120

Query: 121 LLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGL 180
           LLRQ GIDF KNNE GID  RF ELLMSSG+VLN++V+WVTFHSGYDFGYLLKLLTC+ L
Sbjct: 121 LLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNL 180

Query: 181 PNDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLT 240
           P  Q GFFE+I+VYFP +YDIKHLMKFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT
Sbjct: 181 PETQTGFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT 240

Query: 241 ACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQ 272
           +CTFRKL++ FF GS++KY+GVLYGLGVENGQ
Sbjct: 241 SCTFRKLQENFFIGSMEKYSGVLYGLGVENGQ 272

[Close]
BLAST of CSPI02G23870.1 vs. Swiss-Prot
Match: CAF1F_ARATH (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana GN=CAF1-6 PE=2 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 1.7e-124
Identity = 204/271 (75.28%), Postives = 237/271 (87.45%), Query Frame = 1 

Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MS+  K DSIQIREVWN NL+EE  LIR +VD F Y+AMDTEFPG+V+RP+GTFK+  D+
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           +Y TLK NV +LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFREF++ SDIFA DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           L+Q GID  KN  +GID  RF ELLMSSG+VLN++V+WVTFHSGYDFGYLLKLLTC+ LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           + Q  FF+LINVYFP +YDIKHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQ 272
           CTFRKL++ FF G + KY+GVLYGLGVENGQ
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVENGQ 271

[Close]
BLAST of CSPI02G23870.1 vs. Swiss-Prot
Match: CAF1J_ARATH (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana GN=CAF1-10 PE=2 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 4.2e-123
Identity = 204/268 (76.12%), Postives = 236/268 (88.06%), Query Frame = 1 

Query: 6   KGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTL 65
           K DSI IREVW+ NL EEFALIR IVDKF+YIAMDTEFPGVVL+P+ TFK  ND NYRTL
Sbjct: 6   KEDSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTL 65

Query: 66  KDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIELLRQCG 125
           K+NV++LKLIQ+GLTFSDE+GNLPTCGTDKFCIWQFNFREFNIG DI+AS+SIELLRQCG
Sbjct: 66  KENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCG 125

Query: 126 IDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAG 185
           IDF+KN E+GIDV RFGEL+MSSG+VLND ++WVTFH GYDFGYL+KLLTC+ LP  QA 
Sbjct: 126 IDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQAD 185

Query: 186 FFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRK 245
           FF+L+ VYFP +YDIKHLM FCN L GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRK
Sbjct: 186 FFKLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSFRK 245

Query: 246 LRDTFFNGSIQKYAGVLYGLGVENGQRT 274
           L++ +F GS +KY GVLYGLGVE+G  T
Sbjct: 246 LKERYFPGSTEKYTGVLYGLGVEDGTTT 273

[Close]
BLAST of CSPI02G23870.1 vs. Swiss-Prot
Match: CAF1B_ARATH (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana GN=CAF1-2 PE=1 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 2.0e-96
Identity = 167/264 (63.26%), Postives = 206/264 (78.03%), Query Frame = 1 

Query: 8   DSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNIN------DFN 67
           D+I+IREVWN NLE+E ALI   +D F Y+AMDTEFPG+V + +    N N      ++N
Sbjct: 12  DTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYN 71

Query: 68  YRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIELL 127
           Y TLK NV MLKLIQLGLT SDE GNLPTCGT+K CIWQFNFREFN+ SD+FA DSIELL
Sbjct: 72  YDTLKANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELL 131

Query: 128 RQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPN 187
           R+  ID +KNNE G+D  RF ELLM SGVVLND ++WVTFH GYDFGYLLKLL+ + LP 
Sbjct: 132 RKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPE 191

Query: 188 DQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTAC 247
           + + FF+ +  +FPV+YDIK+LM FC +L+GGL K+AELL V+R+G+ HQAGSDSLLT  
Sbjct: 192 EISDFFDQMEKFFPVVYDIKYLMGFCTNLYGGLEKIAELLGVKRVGISHQAGSDSLLTLR 251

Query: 248 TFRKLRDTFFNGSIQKYAGVLYGL 266
           TF K+++ FF GS+ KY+G L+GL
Sbjct: 252 TFIKMKEFFFTGSLLKYSGFLFGL 275

[Close]
BLAST of CSPI02G23870.1 vs. Swiss-Prot
Match: CNOT7_HUMAN (CCR4-NOT transcription complex subunit 7 OS=Homo sapiens GN=CNOT7 PE=1 SV=3)

HSP 1 Score: 302.0 bits (772), Expect = 6.7e-81
Identity = 149/269 (55.39%), Postives = 194/269 (72.12%), Query Frame = 1 

Query: 9   SIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDN 68
           S +I EVW  NL+EE   IR ++ K+NY+AMDTEFPGVV RP+G F++  D+ Y+ L+ N
Sbjct: 9   SQRICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCN 68

Query: 69  VEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIELLRQCGIDF 128
           V++LK+IQLGLTF +E G  P  GT     WQFNF+ FN+  D++A DSIELL   GI F
Sbjct: 69  VDLLKIIQLGLTFMNEQGEYPP-GTST---WQFNFK-FNLTEDMYAQDSIELLTTSGIQF 128

Query: 129 QKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFE 188
           +K+ EEGI+   F ELLM+SGVVL + V W++FHSGYDFGYL+K+LT   LP ++  FFE
Sbjct: 129 KKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFE 188

Query: 189 LINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRD 248
           ++ ++FPV+YD+K+LMK C +L GGL ++AE LE+ERIG  HQAGSDSLLT   F K+R+
Sbjct: 189 ILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMRE 248

Query: 249 TFFNGSIQ--KYAGVLYGLG-----VENG 271
            FF   I   KY G LYGLG     V+NG
Sbjct: 249 MFFEDHIDDAKYCGHLYGLGSGSSYVQNG 272

[Close]
BLAST of CSPI02G23870.1 vs. TrEMBL
Match: A0A0A0LMH2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G382610 PE=4 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 3.5e-161
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 1 

Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF
Sbjct: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL
Sbjct: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180

Query: 181 NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 275
           CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN
Sbjct: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 274

[Close]
BLAST of CSPI02G23870.1 vs. TrEMBL
Match: W9QRX8_9ROSA (Putative CCR4-associated factor 1-7-like protein OS=Morus notabilis GN=L484_014468 PE=4 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 4.6e-145
Identity = 244/276 (88.41%), Postives = 263/276 (95.29%), Query Frame = 1 

Query: 1   MSILPK--GDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNIN 60
           MSIL K  GDSIQIREVWN NLEEEFALIR IVDK+NY+AMDTEFPGVVLRP+G FKNIN
Sbjct: 1   MSILTKGDGDSIQIREVWNDNLEEEFALIREIVDKYNYVAMDTEFPGVVLRPVGNFKNIN 60

Query: 61  DFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSI 120
           D+NY+TLKDNV+MLKLIQLGLTFSDE+GNLPTCGTDKFCIWQFNFREFNI  DIFASDSI
Sbjct: 61  DYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSI 120

Query: 121 ELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRG 180
           ELLRQCGIDF+KNNE+GIDVNRFGELLMSSG+VLND V+WVTFHSGYDFGYLLKLLTC+ 
Sbjct: 121 ELLRQCGIDFKKNNEKGIDVNRFGELLMSSGIVLNDGVHWVTFHSGYDFGYLLKLLTCQS 180

Query: 181 LPNDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLL 240
           LP+ QAGFF+LINVYFP++YDIKHLMKFCNSLHGGLNKLAELLEVER+GVCHQAGSDSLL
Sbjct: 181 LPDTQAGFFDLINVYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLL 240

Query: 241 TACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 275
           T+CTFRKLRDTFFNGS +KYAGVLYGLGVENGQ TN
Sbjct: 241 TSCTFRKLRDTFFNGSTEKYAGVLYGLGVENGQTTN 276

[Close]
BLAST of CSPI02G23870.1 vs. TrEMBL
Match: A0A067KMK9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07101 PE=4 SV=1)

HSP 1 Score: 521.5 bits (1342), Expect = 6.0e-145
Identity = 244/275 (88.73%), Postives = 261/275 (94.91%), Query Frame = 1 

Query: 1   MSILPKGD-SIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNIND 60
           MSI+PK D SIQIREVWN NLEEEFALIR IVD+FNY+AMDTEFPGVVLRP+G FKNIND
Sbjct: 1   MSIIPKNDDSIQIREVWNDNLEEEFALIREIVDQFNYVAMDTEFPGVVLRPVGNFKNIND 60

Query: 61  FNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIE 120
           +NY+TLKDNV+MLKLIQLGLTFSDE+GNLPTCGTDKFCIWQFNFREFNI  DIFASDSIE
Sbjct: 61  YNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIE 120

Query: 121 LLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGL 180
           LLRQCGIDF+KNNE+GIDVNRFGELLMSSGVVLND V WVTFHSGYDFGYLLKLLTCR L
Sbjct: 121 LLRQCGIDFKKNNEKGIDVNRFGELLMSSGVVLNDSVYWVTFHSGYDFGYLLKLLTCRSL 180

Query: 181 PNDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLT 240
           P+ QAGFF+LIN+YFPV+YDIKHLMKFCNSLHGGLNKLAELLEVER+GVCHQAGSDSLLT
Sbjct: 181 PDTQAGFFDLINMYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLT 240

Query: 241 ACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 275
           +CTFRKLRD FFNGS +KYAGVLYGLGVENGQ TN
Sbjct: 241 SCTFRKLRDNFFNGSAEKYAGVLYGLGVENGQNTN 275

[Close]
BLAST of CSPI02G23870.1 vs. TrEMBL
Match: B9RNX3_RICCO (Ccr4-associated factor, putative OS=Ricinus communis GN=RCOM_0921770 PE=4 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 1.3e-144
Identity = 238/273 (87.18%), Postives = 259/273 (94.87%), Query Frame = 1 

Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MSI+PKGDSI IREVWN NLEEEF LIR IVD+FNY+AMDTEFPGVVLRP+G FKNIND+
Sbjct: 1   MSIIPKGDSIHIREVWNDNLEEEFTLIREIVDQFNYVAMDTEFPGVVLRPVGNFKNINDY 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           NY+TLKDNV+MLKLIQLGLTFSDE+GNLPTCGTDKFCIWQFNFREFNI  DIFASDSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           LRQCGIDF+KNNE+GIDVNRFGEL+MSSG+VLND V+WVTFHSGYDFGYLLKLLTCR LP
Sbjct: 121 LRQCGIDFKKNNEKGIDVNRFGELMMSSGIVLNDGVHWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 181 NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           + QAGFF+LIN YFP++YDIKHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+
Sbjct: 181 DTQAGFFDLINTYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRT 274
           CTFRKLRD FFNGS +KYAGVLYGLGVENGQ T
Sbjct: 241 CTFRKLRDNFFNGSTEKYAGVLYGLGVENGQNT 273

[Close]
BLAST of CSPI02G23870.1 vs. TrEMBL
Match: A0A0D2UK39_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G244300 PE=4 SV=1)

HSP 1 Score: 516.5 bits (1329), Expect = 1.9e-143
Identity = 236/274 (86.13%), Postives = 259/274 (94.53%), Query Frame = 1 

Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MS LPKG+S+ IREVWN NLEEEFALIR IVD +NY+AMDTEFPGVVLRP+GTFKNIND+
Sbjct: 1   MSGLPKGESVHIREVWNDNLEEEFALIREIVDTYNYVAMDTEFPGVVLRPVGTFKNINDY 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           NY+TLKDNV+MLKLIQLGLTFSDE+GNLPTCGTD FCIWQFNFREFN+  DIFASDSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQFNFREFNLSEDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           LRQCGIDF+KNNE+GIDV RFGELLMSSGVVLNDDV+WVTFHSGYDFGYLLKLLTCR LP
Sbjct: 121 LRQCGIDFKKNNEKGIDVTRFGELLMSSGVVLNDDVHWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 181 NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           + QAGFF+LI +YFP++YDIKH+MKFCNSLHGGLNKLAELLEVER+GVCHQAGSDSLLT+
Sbjct: 181 DSQAGFFDLIKIYFPMVYDIKHMMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 275
           CTFRKLRD FFNGS +KYAGVLYGLGV+NGQ TN
Sbjct: 241 CTFRKLRDNFFNGSTEKYAGVLYGLGVQNGQNTN 274

[Close]
BLAST of CSPI02G23870.1 vs. TAIR10
Match: AT2G32070.1 (AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 448.7 bits (1153), Expect = 2.5e-126
Identity = 207/272 (76.10%), Postives = 240/272 (88.24%), Query Frame = 1 

Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MS+  K DSIQIREVWN NLE E ALIR +VD F ++AMDTEFPG+V RP+GTFK   ++
Sbjct: 1   MSLFLKDDSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEY 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTD-KFCIWQFNFREFNIGSDIFASDSIE 120
           +Y TLK NV +LK+IQLGLTFSDE GNLPTCGTD K+CIWQFNFREF++ SDI+A+DSIE
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIE 120

Query: 121 LLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGL 180
           LLRQ GIDF KNNE GID  RF ELLMSSG+VLN++V+WVTFHSGYDFGYLLKLLTC+ L
Sbjct: 121 LLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNL 180

Query: 181 PNDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLT 240
           P  Q GFFE+I+VYFP +YDIKHLMKFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT
Sbjct: 181 PETQTGFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT 240

Query: 241 ACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQ 272
           +CTFRKL++ FF GS++KY+GVLYGLGVENGQ
Sbjct: 241 SCTFRKLQENFFIGSMEKYSGVLYGLGVENGQ 272

[Close]
BLAST of CSPI02G23870.1 vs. TAIR10
Match: AT1G80780.3 (AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 442.6 bits (1137), Expect = 1.8e-124
Identity = 202/269 (75.09%), Postives = 235/269 (87.36%), Query Frame = 1 

Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MS+  K DSIQIREVWN NL+EE  LIR +VD F Y+AMDTEFPG+V+RP+GTFK+  D+
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           +Y TLK NV +LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFREF++ SDIFA DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           L+Q GID  KN  +GID  RF ELLMSSG+VLN++V+WVTFHSGYDFGYLLKLLTC+ LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           + Q  FF+LINVYFP +YDIKHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVEN 270
           CTFRKL++ FF G + KY+GVLYGLGVEN
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVEN 269

[Close]
BLAST of CSPI02G23870.1 vs. TAIR10
Match: AT5G10960.1 (AT5G10960.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 442.2 bits (1136), Expect = 2.3e-124
Identity = 204/268 (76.12%), Postives = 236/268 (88.06%), Query Frame = 1 

Query: 6   KGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTL 65
           K DSI IREVW+ NL EEFALIR IVDKF+YIAMDTEFPGVVL+P+ TFK  ND NYRTL
Sbjct: 6   KEDSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTL 65

Query: 66  KDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIELLRQCG 125
           K+NV++LKLIQ+GLTFSDE+GNLPTCGTDKFCIWQFNFREFNIG DI+AS+SIELLRQCG
Sbjct: 66  KENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCG 125

Query: 126 IDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAG 185
           IDF+KN E+GIDV RFGEL+MSSG+VLND ++WVTFH GYDFGYL+KLLTC+ LP  QA 
Sbjct: 126 IDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQAD 185

Query: 186 FFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRK 245
           FF+L+ VYFP +YDIKHLM FCN L GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRK
Sbjct: 186 FFKLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSFRK 245

Query: 246 LRDTFFNGSIQKYAGVLYGLGVENGQRT 274
           L++ +F GS +KY GVLYGLGVE+G  T
Sbjct: 246 LKERYFPGSTEKYTGVLYGLGVEDGTTT 273

[Close]
BLAST of CSPI02G23870.1 vs. TAIR10
Match: AT1G15920.2 (AT1G15920.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 353.6 bits (906), Expect = 1.1e-97
Identity = 167/264 (63.26%), Postives = 206/264 (78.03%), Query Frame = 1 

Query: 8   DSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNIN------DFN 67
           D+I+IREVWN NLE+E ALI   +D F Y+AMDTEFPG+V + +    N N      ++N
Sbjct: 12  DTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYN 71

Query: 68  YRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIELL 127
           Y TLK NV MLKLIQLGLT SDE GNLPTCGT+K CIWQFNFREFN+ SD+FA DSIELL
Sbjct: 72  YDTLKANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELL 131

Query: 128 RQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPN 187
           R+  ID +KNNE G+D  RF ELLM SGVVLND ++WVTFH GYDFGYLLKLL+ + LP 
Sbjct: 132 RKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPE 191

Query: 188 DQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTAC 247
           + + FF+ +  +FPV+YDIK+LM FC +L+GGL K+AELL V+R+G+ HQAGSDSLLT  
Sbjct: 192 EISDFFDQMEKFFPVVYDIKYLMGFCTNLYGGLEKIAELLGVKRVGISHQAGSDSLLTLR 251

Query: 248 TFRKLRDTFFNGSIQKYAGVLYGL 266
           TF K+++ FF GS+ KY+G L+GL
Sbjct: 252 TFIKMKEFFFTGSLLKYSGFLFGL 275

[Close]
BLAST of CSPI02G23870.1 vs. TAIR10
Match: AT3G44260.1 (AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 279.6 bits (714), Expect = 2.0e-75
Identity = 143/269 (53.16%), Postives = 188/269 (69.89%), Query Frame = 1 

Query: 5   PKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRT 64
           P G ++  REVW  NLE EF LI  I+D + +I+MDTEFPGV+ +    F N +D  Y  
Sbjct: 12  PDGVTVVTREVWAENLESEFELISEIIDDYPFISMDTEFPGVIFKSDLRFTNPDDL-YTL 71

Query: 65  LKDNVEMLKLIQLGLTFSDEDGNLPTCGTD--KFCIWQFNFREFNIGSDIFASDSIELLR 124
           LK NV+ L LIQ+GLT SD +GNLP  G D  +  IW+FNFR+F++  D  A DSIELLR
Sbjct: 72  LKANVDALSLIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVARDAHAPDSIELLR 131

Query: 125 QCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPND 184
           + GIDF++N  +G++  RF EL+MSSG+V N++V+WVTFHS YDFGYL+K+LT R LP  
Sbjct: 132 RQGIDFERNCRDGVESERFAELMMSSGLVCNEEVSWVTFHSAYDFGYLMKILTRRELPGA 191

Query: 185 QAGFFELINVYF-PVLYDIKHLMKFC-NSLHGGLNKLAELLEVER-IGVCHQAGSDSLLT 244
              F  ++ V F   +YD+KH+MKFC   L GGL+++A  LEV R +G CHQAGSDSLLT
Sbjct: 192 LGEFKRVMRVLFGERVYDVKHMMKFCERRLFGGLDRVARTLEVNRAVGKCHQAGSDSLLT 251

Query: 245 ACTFRKLRDTFF-NGSIQKYAGVLYGLGV 268
              F+++RD +F     +K+AGVLYGL V
Sbjct: 252 WHAFQRMRDLYFVQDGPEKHAGVLYGLEV 279

[Close]
BLAST of CSPI02G23870.1 vs. NCBI nr
Match: gi|449441868|ref|XP_004138704.1| (PREDICTED: probable CCR4-associated factor 1 homolog 7 [Cucumis sativus])

HSP 1 Score: 575.5 bits (1482), Expect = 5.0e-161
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 1 

Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF
Sbjct: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL
Sbjct: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180

Query: 181 NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 275
           CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN
Sbjct: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 274

[Close]
BLAST of CSPI02G23870.1 vs. NCBI nr
Match: gi|659088972|ref|XP_008445259.1| (PREDICTED: probable CCR4-associated factor 1 homolog 7 [Cucumis melo])

HSP 1 Score: 574.3 bits (1479), Expect = 1.1e-160
Identity = 273/274 (99.64%), Postives = 274/274 (100.00%), Query Frame = 1 

Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF
Sbjct: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL
Sbjct: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180

Query: 181 NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           NDQAGFFELINVYFPV+YDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 NDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 275
           CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN
Sbjct: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 274

[Close]
BLAST of CSPI02G23870.1 vs. NCBI nr
Match: gi|703074973|ref|XP_010089956.1| (putative CCR4-associated factor 1-7-like protein [Morus notabilis])

HSP 1 Score: 521.9 bits (1343), Expect = 6.6e-145
Identity = 244/276 (88.41%), Postives = 263/276 (95.29%), Query Frame = 1 

Query: 1   MSILPK--GDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNIN 60
           MSIL K  GDSIQIREVWN NLEEEFALIR IVDK+NY+AMDTEFPGVVLRP+G FKNIN
Sbjct: 1   MSILTKGDGDSIQIREVWNDNLEEEFALIREIVDKYNYVAMDTEFPGVVLRPVGNFKNIN 60

Query: 61  DFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSI 120
           D+NY+TLKDNV+MLKLIQLGLTFSDE+GNLPTCGTDKFCIWQFNFREFNI  DIFASDSI
Sbjct: 61  DYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSI 120

Query: 121 ELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRG 180
           ELLRQCGIDF+KNNE+GIDVNRFGELLMSSG+VLND V+WVTFHSGYDFGYLLKLLTC+ 
Sbjct: 121 ELLRQCGIDFKKNNEKGIDVNRFGELLMSSGIVLNDGVHWVTFHSGYDFGYLLKLLTCQS 180

Query: 181 LPNDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLL 240
           LP+ QAGFF+LINVYFP++YDIKHLMKFCNSLHGGLNKLAELLEVER+GVCHQAGSDSLL
Sbjct: 181 LPDTQAGFFDLINVYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLL 240

Query: 241 TACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 275
           T+CTFRKLRDTFFNGS +KYAGVLYGLGVENGQ TN
Sbjct: 241 TSCTFRKLRDTFFNGSTEKYAGVLYGLGVENGQTTN 276

[Close]
BLAST of CSPI02G23870.1 vs. NCBI nr
Match: gi|802626869|ref|XP_012076450.1| (PREDICTED: probable CCR4-associated factor 1 homolog 7 [Jatropha curcas])

HSP 1 Score: 521.5 bits (1342), Expect = 8.6e-145
Identity = 244/275 (88.73%), Postives = 261/275 (94.91%), Query Frame = 1 

Query: 1   MSILPKGD-SIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNIND 60
           MSI+PK D SIQIREVWN NLEEEFALIR IVD+FNY+AMDTEFPGVVLRP+G FKNIND
Sbjct: 1   MSIIPKNDDSIQIREVWNDNLEEEFALIREIVDQFNYVAMDTEFPGVVLRPVGNFKNIND 60

Query: 61  FNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIE 120
           +NY+TLKDNV+MLKLIQLGLTFSDE+GNLPTCGTDKFCIWQFNFREFNI  DIFASDSIE
Sbjct: 61  YNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIE 120

Query: 121 LLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGL 180
           LLRQCGIDF+KNNE+GIDVNRFGELLMSSGVVLND V WVTFHSGYDFGYLLKLLTCR L
Sbjct: 121 LLRQCGIDFKKNNEKGIDVNRFGELLMSSGVVLNDSVYWVTFHSGYDFGYLLKLLTCRSL 180

Query: 181 PNDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLT 240
           P+ QAGFF+LIN+YFPV+YDIKHLMKFCNSLHGGLNKLAELLEVER+GVCHQAGSDSLLT
Sbjct: 181 PDTQAGFFDLINMYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLT 240

Query: 241 ACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 275
           +CTFRKLRD FFNGS +KYAGVLYGLGVENGQ TN
Sbjct: 241 SCTFRKLRDNFFNGSAEKYAGVLYGLGVENGQNTN 275

[Close]
BLAST of CSPI02G23870.1 vs. NCBI nr
Match: gi|1000974262|ref|XP_015572459.1| (PREDICTED: probable CCR4-associated factor 1 homolog 7 [Ricinus communis])

HSP 1 Score: 520.4 bits (1339), Expect = 1.9e-144
Identity = 238/273 (87.18%), Postives = 259/273 (94.87%), Query Frame = 1 

Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MSI+PKGDSI IREVWN NLEEEF LIR IVD+FNY+AMDTEFPGVVLRP+G FKNIND+
Sbjct: 1   MSIIPKGDSIHIREVWNDNLEEEFTLIREIVDQFNYVAMDTEFPGVVLRPVGNFKNINDY 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           NY+TLKDNV+MLKLIQLGLTFSDE+GNLPTCGTDKFCIWQFNFREFNI  DIFASDSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           LRQCGIDF+KNNE+GIDVNRFGEL+MSSG+VLND V+WVTFHSGYDFGYLLKLLTCR LP
Sbjct: 121 LRQCGIDFKKNNEKGIDVNRFGELMMSSGIVLNDGVHWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 181 NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           + QAGFF+LIN YFP++YDIKHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+
Sbjct: 181 DTQAGFFDLINTYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRT 274
           CTFRKLRD FFNGS +KYAGVLYGLGVENGQ T
Sbjct: 241 CTFRKLRDNFFNGSTEKYAGVLYGLGVENGQNT 273

The following BLAST results are available for this feature:
BLAST of CSPI02G23870.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CAF1G_ARATH4.5e-12576.10Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana GN=CAF1-7 PE... [more]
CAF1F_ARATH1.7e-12475.28Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana GN=CAF1-6 PE... [more]
CAF1J_ARATH4.2e-12376.12Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana GN=CAF1-10 ... [more]
CAF1B_ARATH2.0e-9663.26Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana GN=CAF1-2 PE... [more]
CNOT7_HUMAN6.7e-8155.39CCR4-NOT transcription complex subunit 7 OS=Homo sapiens GN=CNOT7 PE=1 SV=3[more]
BLAST of CSPI02G23870.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LMH2_CUCSA3.5e-161100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G382610 PE=4 SV=1[more]
W9QRX8_9ROSA4.6e-14588.41Putative CCR4-associated factor 1-7-like protein OS=Morus notabilis GN=L484_0144... [more]
A0A067KMK9_JATCU6.0e-14588.73Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07101 PE=4 SV=1[more]
B9RNX3_RICCO1.3e-14487.18Ccr4-associated factor, putative OS=Ricinus communis GN=RCOM_0921770 PE=4 SV=1[more]
A0A0D2UK39_GOSRA1.9e-14386.13Uncharacterized protein OS=Gossypium raimondii GN=B456_010G244300 PE=4 SV=1[more]
BLAST of CSPI02G23870.1 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G32070.12.5e-12676.10 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT1G80780.31.8e-12475.09 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT5G10960.12.3e-12476.12 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT1G15920.21.1e-9763.26 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT3G44260.12.0e-7553.16 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
BLAST of CSPI02G23870.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449441868|ref|XP_004138704.1|5.0e-161100.00PREDICTED: probable CCR4-associated factor 1 homolog 7 [Cucumis sativus][more]
gi|659088972|ref|XP_008445259.1|1.1e-16099.64PREDICTED: probable CCR4-associated factor 1 homolog 7 [Cucumis melo][more]
gi|703074973|ref|XP_010089956.1|6.6e-14588.41putative CCR4-associated factor 1-7-like protein [Morus notabilis][more]
gi|802626869|ref|XP_012076450.1|8.6e-14588.73PREDICTED: probable CCR4-associated factor 1 homolog 7 [Jatropha curcas][more]
gi|1000974262|ref|XP_015572459.1|1.9e-14487.18PREDICTED: probable CCR4-associated factor 1 homolog 7 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR006941RNase_CAF1
IPR012337RNaseH-like_sf
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051252 regulation of RNA metabolic process
biological_process GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic
cellular_component GO:0005634 nucleus
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004535 poly(A)-specific ribonuclease activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CSPI02G23870CSPI02G23870gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CSPI02G23870.1CSPI02G23870.1-proteinpolypeptide


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CSPI02G23870.1.utr3p1CSPI02G23870.1.utr3p1three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CSPI02G23870.1.cds1CSPI02G23870.1.cds1CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CSPI02G23870.1.utr5p1CSPI02G23870.1.utr5p1five_prime_UTR


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006941Ribonuclease CAF1PFAMPF04857CAF1coord: 161..243
score: 2.7E-6coord: 15..136
score: 2.2
IPR012337Ribonuclease H-like domainGENE3DG3DSA:3.30.420.10coord: 5..267
score: 5.9E
IPR012337Ribonuclease H-like domainunknownSSF53098Ribonuclease H-likecoord: 12..265
score: 4.62
NoneNo IPR availablePANTHERPTHR10797CCR4-NOT TRANSCRIPTION COMPLEX SUBUNITcoord: 1..274
score: 5.7E