CSPI02G23870 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI02G23870
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionCCR4-NOT transcription complex subunit 7
LocationChr2 : 20476119 .. 20477670 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCTCTCTCTCTCTCTCGCTCTATCAAACCCTGTTTTCTCTCTGCCGCTCCTCCTCCTCCTCCTCCTCCTCCTCCGCCGCCGTTGACCTCCTTCTACAACTCCCTTCTTCTAGATCTGCCCTTCCCATCTTTCAATTTCACATTTTCAAGGTCAGATCTACTTACCCACTCCCTATTTCTTTTACATCACTTCATTTCTAGGGTTCCACTTAACCCCCTCCTTCTCTTTCAGATCTGTAACCACTTCTTTACTTCCCTTACTCTGGCGTTGGTTTTCCCACGCCCCCGCTTGCTTCTTTTTATATCCCCGTATCTGTTCGCCATATTTTCTTTAACTCTTCGTCGATTTCTCACTCTTATCGAGTTGACCTTGGAGGAATGTCGATTTTACCCAAAGGTGATTCGATTCAAATCCGGGAAGTCTGGAATGCTAATTTGGAAGAGGAGTTTGCGTTAATCCGTGCGATTGTTGATAAATTTAATTACATAGCTATGGATACTGAGTTCCCTGGGGTTGTACTTCGCCCTTTGGGTACTTTCAAGAATATCAATGATTTCAACTACCGGACTCTTAAGGATAATGTTGAGATGTTGAAGTTGATTCAGTTGGGTCTTACTTTCTCTGATGAGGATGGGAATCTCCCAACTTGTGGAACTGATAAGTTTTGCATTTGGCAGTTCAATTTTCGTGAGTTCAATATTGGTAGTGATATTTTTGCTAGTGATTCCATTGAGCTTCTTCGTCAGTGTGGTATTGATTTTCAGAAGAACAATGAAGAGGGTATCGATGTTAATCGTTTTGGTGAGCTTCTTATGTCTTCTGGGGTTGTGTTAAACGATGATGTGAACTGGGTCACGTTTCACAGTGGGTACGATTTTGGTTACTTACTGAAATTACTGACTTGCCGTGGCTTACCCAATGATCAGGCGGGTTTCTTTGAGTTGATCAATGTCTACTTTCCAGTGCTTTATGATATCAAGCATTTGATGAAGTTTTGCAACAGTCTCCACGGTGGGTTGAACAAGCTTGCTGAATTATTAGAAGTTGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTCTGCTTACTGCCTGTACTTTTAGGAAGTTAAGGGATACCTTTTTCAATGGGTCTATACAGAAATACGCAGGTGTTTTGTATGGCCTTGGTGTTGAAAATGGACAGCGTACTAATTGAAGAGAATTACAAAGTGTTTGTAGAAGTGTGAGACATTTAGTTACTTCTGTACAATTTGGCTAAAGCATTGATGATGATTGTAACCGTTTTCAGCTTTCCTGCTCTGTAATAGAAACCTCCGACTGTTTTTTGCAGCTTAGTGGTTTCTTGTAAATTATGTCAGCTAGTGTTTCAATAAGAATTTTATTGACGTTTTTTAGAATGAGTTTCCACTTCTTTTGTGAACTTATATGTTGTTACTAATTCCTTTAGGTTCGTTAATCATGTAAGGCCCTAAAGGTATTTGATATGATACACAATGTTGCCAATAGAACTTATTTCTTTAACAACCGGTTATGTGAATTCTCAG

mRNA sequence

ATGTCGATTTTACCCAAAGGTGATTCGATTCAAATCCGGGAAGTCTGGAATGCTAATTTGGAAGAGGAGTTTGCGTTAATCCGTGCGATTGTTGATAAATTTAATTACATAGCTATGGATACTGAGTTCCCTGGGGTTGTACTTCGCCCTTTGGGTACTTTCAAGAATATCAATGATTTCAACTACCGGACTCTTAAGGATAATGTTGAGATGTTGAAGTTGATTCAGTTGGGTCTTACTTTCTCTGATGAGGATGGGAATCTCCCAACTTGTGGAACTGATAAGTTTTGCATTTGGCAGTTCAATTTTCGTGAGTTCAATATTGGTAGTGATATTTTTGCTAGTGATTCCATTGAGCTTCTTCGTCAGTGTGGTATTGATTTTCAGAAGAACAATGAAGAGGGTATCGATGTTAATCGTTTTGGTGAGCTTCTTATGTCTTCTGGGGTTGTGTTAAACGATGATGTGAACTGGGTCACGTTTCACAGTGGGTACGATTTTGGTTACTTACTGAAATTACTGACTTGCCGTGGCTTACCCAATGATCAGGCGGGTTTCTTTGAGTTGATCAATGTCTACTTTCCAGTGCTTTATGATATCAAGCATTTGATGAAGTTTTGCAACAGTCTCCACGGTGGGTTGAACAAGCTTGCTGAATTATTAGAAGTTGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTCTGCTTACTGCCTGTACTTTTAGGAAGTTAAGGGATACCTTTTTCAATGGGTCTATACAGAAATACGCAGGTGTTTTGTATGGCCTTGGTGTTGAAAATGGACAGCGTACTAATTGA

Coding sequence (CDS)

ATGTCGATTTTACCCAAAGGTGATTCGATTCAAATCCGGGAAGTCTGGAATGCTAATTTGGAAGAGGAGTTTGCGTTAATCCGTGCGATTGTTGATAAATTTAATTACATAGCTATGGATACTGAGTTCCCTGGGGTTGTACTTCGCCCTTTGGGTACTTTCAAGAATATCAATGATTTCAACTACCGGACTCTTAAGGATAATGTTGAGATGTTGAAGTTGATTCAGTTGGGTCTTACTTTCTCTGATGAGGATGGGAATCTCCCAACTTGTGGAACTGATAAGTTTTGCATTTGGCAGTTCAATTTTCGTGAGTTCAATATTGGTAGTGATATTTTTGCTAGTGATTCCATTGAGCTTCTTCGTCAGTGTGGTATTGATTTTCAGAAGAACAATGAAGAGGGTATCGATGTTAATCGTTTTGGTGAGCTTCTTATGTCTTCTGGGGTTGTGTTAAACGATGATGTGAACTGGGTCACGTTTCACAGTGGGTACGATTTTGGTTACTTACTGAAATTACTGACTTGCCGTGGCTTACCCAATGATCAGGCGGGTTTCTTTGAGTTGATCAATGTCTACTTTCCAGTGCTTTATGATATCAAGCATTTGATGAAGTTTTGCAACAGTCTCCACGGTGGGTTGAACAAGCTTGCTGAATTATTAGAAGTTGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTCTGCTTACTGCCTGTACTTTTAGGAAGTTAAGGGATACCTTTTTCAATGGGTCTATACAGAAATACGCAGGTGTTTTGTATGGCCTTGGTGTTGAAAATGGACAGCGTACTAATTGA
Homology
[Close]
BLAST of CSPI02G23870 vs. Swiss-Prot
Match: CAF1G_ARATH (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana GN=CAF1-7 PE=2 SV=2)

HSP 1 Score: 448.7 bits (1153), Expect = 4.5e-125
Identity = 207/272 (76.10%), Postives = 240/272 (88.24%), Query Frame = 1 

Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MS+  K DSIQIREVWN NLE E ALIR +VD F ++AMDTEFPG+V RP+GTFK   ++
Sbjct: 1   MSLFLKDDSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEY 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTD-KFCIWQFNFREFNIGSDIFASDSIE 120
           +Y TLK NV +LK+IQLGLTFSDE GNLPTCGTD K+CIWQFNFREF++ SDI+A+DSIE
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIE 120

Query: 121 LLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGL 180
           LLRQ GIDF KNNE GID  RF ELLMSSG+VLN++V+WVTFHSGYDFGYLLKLLTC+ L
Sbjct: 121 LLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNL 180

Query: 181 PNDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLT 240
           P  Q GFFE+I+VYFP +YDIKHLMKFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT
Sbjct: 181 PETQTGFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT 240

Query: 241 ACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQ 272
           +CTFRKL++ FF GS++KY+GVLYGLGVENGQ
Sbjct: 241 SCTFRKLQENFFIGSMEKYSGVLYGLGVENGQ 272

[Close]
BLAST of CSPI02G23870 vs. Swiss-Prot
Match: CAF1F_ARATH (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana GN=CAF1-6 PE=2 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 1.7e-124
Identity = 204/271 (75.28%), Postives = 237/271 (87.45%), Query Frame = 1 

Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MS+  K DSIQIREVWN NL+EE  LIR +VD F Y+AMDTEFPG+V+RP+GTFK+  D+
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           +Y TLK NV +LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFREF++ SDIFA DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           L+Q GID  KN  +GID  RF ELLMSSG+VLN++V+WVTFHSGYDFGYLLKLLTC+ LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           + Q  FF+LINVYFP +YDIKHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQ 272
           CTFRKL++ FF G + KY+GVLYGLGVENGQ
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVENGQ 271

[Close]
BLAST of CSPI02G23870 vs. Swiss-Prot
Match: CAF1J_ARATH (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana GN=CAF1-10 PE=2 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 4.2e-123
Identity = 204/268 (76.12%), Postives = 236/268 (88.06%), Query Frame = 1 

Query: 6   KGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTL 65
           K DSI IREVW+ NL EEFALIR IVDKF+YIAMDTEFPGVVL+P+ TFK  ND NYRTL
Sbjct: 6   KEDSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTL 65

Query: 66  KDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIELLRQCG 125
           K+NV++LKLIQ+GLTFSDE+GNLPTCGTDKFCIWQFNFREFNIG DI+AS+SIELLRQCG
Sbjct: 66  KENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCG 125

Query: 126 IDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAG 185
           IDF+KN E+GIDV RFGEL+MSSG+VLND ++WVTFH GYDFGYL+KLLTC+ LP  QA 
Sbjct: 126 IDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQAD 185

Query: 186 FFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRK 245
           FF+L+ VYFP +YDIKHLM FCN L GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRK
Sbjct: 186 FFKLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSFRK 245

Query: 246 LRDTFFNGSIQKYAGVLYGLGVENGQRT 274
           L++ +F GS +KY GVLYGLGVE+G  T
Sbjct: 246 LKERYFPGSTEKYTGVLYGLGVEDGTTT 273

[Close]
BLAST of CSPI02G23870 vs. Swiss-Prot
Match: CAF1B_ARATH (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana GN=CAF1-2 PE=1 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 2.0e-96
Identity = 167/264 (63.26%), Postives = 206/264 (78.03%), Query Frame = 1 

Query: 8   DSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNIN------DFN 67
           D+I+IREVWN NLE+E ALI   +D F Y+AMDTEFPG+V + +    N N      ++N
Sbjct: 12  DTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYN 71

Query: 68  YRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIELL 127
           Y TLK NV MLKLIQLGLT SDE GNLPTCGT+K CIWQFNFREFN+ SD+FA DSIELL
Sbjct: 72  YDTLKANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELL 131

Query: 128 RQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPN 187
           R+  ID +KNNE G+D  RF ELLM SGVVLND ++WVTFH GYDFGYLLKLL+ + LP 
Sbjct: 132 RKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPE 191

Query: 188 DQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTAC 247
           + + FF+ +  +FPV+YDIK+LM FC +L+GGL K+AELL V+R+G+ HQAGSDSLLT  
Sbjct: 192 EISDFFDQMEKFFPVVYDIKYLMGFCTNLYGGLEKIAELLGVKRVGISHQAGSDSLLTLR 251

Query: 248 TFRKLRDTFFNGSIQKYAGVLYGL 266
           TF K+++ FF GS+ KY+G L+GL
Sbjct: 252 TFIKMKEFFFTGSLLKYSGFLFGL 275

[Close]
BLAST of CSPI02G23870 vs. Swiss-Prot
Match: CNOT7_HUMAN (CCR4-NOT transcription complex subunit 7 OS=Homo sapiens GN=CNOT7 PE=1 SV=3)

HSP 1 Score: 302.0 bits (772), Expect = 6.7e-81
Identity = 149/269 (55.39%), Postives = 194/269 (72.12%), Query Frame = 1 

Query: 9   SIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDN 68
           S +I EVW  NL+EE   IR ++ K+NY+AMDTEFPGVV RP+G F++  D+ Y+ L+ N
Sbjct: 9   SQRICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCN 68

Query: 69  VEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIELLRQCGIDF 128
           V++LK+IQLGLTF +E G  P  GT     WQFNF+ FN+  D++A DSIELL   GI F
Sbjct: 69  VDLLKIIQLGLTFMNEQGEYPP-GTST---WQFNFK-FNLTEDMYAQDSIELLTTSGIQF 128

Query: 129 QKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFE 188
           +K+ EEGI+   F ELLM+SGVVL + V W++FHSGYDFGYL+K+LT   LP ++  FFE
Sbjct: 129 KKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFE 188

Query: 189 LINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRD 248
           ++ ++FPV+YD+K+LMK C +L GGL ++AE LE+ERIG  HQAGSDSLLT   F K+R+
Sbjct: 189 ILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMRE 248

Query: 249 TFFNGSIQ--KYAGVLYGLG-----VENG 271
            FF   I   KY G LYGLG     V+NG
Sbjct: 249 MFFEDHIDDAKYCGHLYGLGSGSSYVQNG 272

[Close]
BLAST of CSPI02G23870 vs. TrEMBL
Match: A0A0A0LMH2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G382610 PE=4 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 3.5e-161
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 1 

Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF
Sbjct: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL
Sbjct: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180

Query: 181 NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 275
           CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN
Sbjct: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 274

[Close]
BLAST of CSPI02G23870 vs. TrEMBL
Match: W9QRX8_9ROSA (Putative CCR4-associated factor 1-7-like protein OS=Morus notabilis GN=L484_014468 PE=4 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 4.6e-145
Identity = 244/276 (88.41%), Postives = 263/276 (95.29%), Query Frame = 1 

Query: 1   MSILPK--GDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNIN 60
           MSIL K  GDSIQIREVWN NLEEEFALIR IVDK+NY+AMDTEFPGVVLRP+G FKNIN
Sbjct: 1   MSILTKGDGDSIQIREVWNDNLEEEFALIREIVDKYNYVAMDTEFPGVVLRPVGNFKNIN 60

Query: 61  DFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSI 120
           D+NY+TLKDNV+MLKLIQLGLTFSDE+GNLPTCGTDKFCIWQFNFREFNI  DIFASDSI
Sbjct: 61  DYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSI 120

Query: 121 ELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRG 180
           ELLRQCGIDF+KNNE+GIDVNRFGELLMSSG+VLND V+WVTFHSGYDFGYLLKLLTC+ 
Sbjct: 121 ELLRQCGIDFKKNNEKGIDVNRFGELLMSSGIVLNDGVHWVTFHSGYDFGYLLKLLTCQS 180

Query: 181 LPNDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLL 240
           LP+ QAGFF+LINVYFP++YDIKHLMKFCNSLHGGLNKLAELLEVER+GVCHQAGSDSLL
Sbjct: 181 LPDTQAGFFDLINVYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLL 240

Query: 241 TACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 275
           T+CTFRKLRDTFFNGS +KYAGVLYGLGVENGQ TN
Sbjct: 241 TSCTFRKLRDTFFNGSTEKYAGVLYGLGVENGQTTN 276

[Close]
BLAST of CSPI02G23870 vs. TrEMBL
Match: A0A067KMK9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07101 PE=4 SV=1)

HSP 1 Score: 521.5 bits (1342), Expect = 6.0e-145
Identity = 244/275 (88.73%), Postives = 261/275 (94.91%), Query Frame = 1 

Query: 1   MSILPKGD-SIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNIND 60
           MSI+PK D SIQIREVWN NLEEEFALIR IVD+FNY+AMDTEFPGVVLRP+G FKNIND
Sbjct: 1   MSIIPKNDDSIQIREVWNDNLEEEFALIREIVDQFNYVAMDTEFPGVVLRPVGNFKNIND 60

Query: 61  FNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIE 120
           +NY+TLKDNV+MLKLIQLGLTFSDE+GNLPTCGTDKFCIWQFNFREFNI  DIFASDSIE
Sbjct: 61  YNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIE 120

Query: 121 LLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGL 180
           LLRQCGIDF+KNNE+GIDVNRFGELLMSSGVVLND V WVTFHSGYDFGYLLKLLTCR L
Sbjct: 121 LLRQCGIDFKKNNEKGIDVNRFGELLMSSGVVLNDSVYWVTFHSGYDFGYLLKLLTCRSL 180

Query: 181 PNDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLT 240
           P+ QAGFF+LIN+YFPV+YDIKHLMKFCNSLHGGLNKLAELLEVER+GVCHQAGSDSLLT
Sbjct: 181 PDTQAGFFDLINMYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLT 240

Query: 241 ACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 275
           +CTFRKLRD FFNGS +KYAGVLYGLGVENGQ TN
Sbjct: 241 SCTFRKLRDNFFNGSAEKYAGVLYGLGVENGQNTN 275

[Close]
BLAST of CSPI02G23870 vs. TrEMBL
Match: B9RNX3_RICCO (Ccr4-associated factor, putative OS=Ricinus communis GN=RCOM_0921770 PE=4 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 1.3e-144
Identity = 238/273 (87.18%), Postives = 259/273 (94.87%), Query Frame = 1 

Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MSI+PKGDSI IREVWN NLEEEF LIR IVD+FNY+AMDTEFPGVVLRP+G FKNIND+
Sbjct: 1   MSIIPKGDSIHIREVWNDNLEEEFTLIREIVDQFNYVAMDTEFPGVVLRPVGNFKNINDY 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           NY+TLKDNV+MLKLIQLGLTFSDE+GNLPTCGTDKFCIWQFNFREFNI  DIFASDSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           LRQCGIDF+KNNE+GIDVNRFGEL+MSSG+VLND V+WVTFHSGYDFGYLLKLLTCR LP
Sbjct: 121 LRQCGIDFKKNNEKGIDVNRFGELMMSSGIVLNDGVHWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 181 NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           + QAGFF+LIN YFP++YDIKHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+
Sbjct: 181 DTQAGFFDLINTYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRT 274
           CTFRKLRD FFNGS +KYAGVLYGLGVENGQ T
Sbjct: 241 CTFRKLRDNFFNGSTEKYAGVLYGLGVENGQNT 273

[Close]
BLAST of CSPI02G23870 vs. TrEMBL
Match: A0A0D2UK39_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G244300 PE=4 SV=1)

HSP 1 Score: 516.5 bits (1329), Expect = 1.9e-143
Identity = 236/274 (86.13%), Postives = 259/274 (94.53%), Query Frame = 1 

Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MS LPKG+S+ IREVWN NLEEEFALIR IVD +NY+AMDTEFPGVVLRP+GTFKNIND+
Sbjct: 1   MSGLPKGESVHIREVWNDNLEEEFALIREIVDTYNYVAMDTEFPGVVLRPVGTFKNINDY 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           NY+TLKDNV+MLKLIQLGLTFSDE+GNLPTCGTD FCIWQFNFREFN+  DIFASDSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQFNFREFNLSEDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           LRQCGIDF+KNNE+GIDV RFGELLMSSGVVLNDDV+WVTFHSGYDFGYLLKLLTCR LP
Sbjct: 121 LRQCGIDFKKNNEKGIDVTRFGELLMSSGVVLNDDVHWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 181 NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           + QAGFF+LI +YFP++YDIKH+MKFCNSLHGGLNKLAELLEVER+GVCHQAGSDSLLT+
Sbjct: 181 DSQAGFFDLIKIYFPMVYDIKHMMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 275
           CTFRKLRD FFNGS +KYAGVLYGLGV+NGQ TN
Sbjct: 241 CTFRKLRDNFFNGSTEKYAGVLYGLGVQNGQNTN 274

[Close]
BLAST of CSPI02G23870 vs. TAIR10
Match: AT2G32070.1 (AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 448.7 bits (1153), Expect = 2.5e-126
Identity = 207/272 (76.10%), Postives = 240/272 (88.24%), Query Frame = 1 

Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MS+  K DSIQIREVWN NLE E ALIR +VD F ++AMDTEFPG+V RP+GTFK   ++
Sbjct: 1   MSLFLKDDSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEY 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTD-KFCIWQFNFREFNIGSDIFASDSIE 120
           +Y TLK NV +LK+IQLGLTFSDE GNLPTCGTD K+CIWQFNFREF++ SDI+A+DSIE
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIE 120

Query: 121 LLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGL 180
           LLRQ GIDF KNNE GID  RF ELLMSSG+VLN++V+WVTFHSGYDFGYLLKLLTC+ L
Sbjct: 121 LLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNL 180

Query: 181 PNDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLT 240
           P  Q GFFE+I+VYFP +YDIKHLMKFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT
Sbjct: 181 PETQTGFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT 240

Query: 241 ACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQ 272
           +CTFRKL++ FF GS++KY+GVLYGLGVENGQ
Sbjct: 241 SCTFRKLQENFFIGSMEKYSGVLYGLGVENGQ 272

[Close]
BLAST of CSPI02G23870 vs. TAIR10
Match: AT1G80780.3 (AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 442.6 bits (1137), Expect = 1.8e-124
Identity = 202/269 (75.09%), Postives = 235/269 (87.36%), Query Frame = 1 

Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MS+  K DSIQIREVWN NL+EE  LIR +VD F Y+AMDTEFPG+V+RP+GTFK+  D+
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           +Y TLK NV +LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFREF++ SDIFA DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           L+Q GID  KN  +GID  RF ELLMSSG+VLN++V+WVTFHSGYDFGYLLKLLTC+ LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           + Q  FF+LINVYFP +YDIKHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVEN 270
           CTFRKL++ FF G + KY+GVLYGLGVEN
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVEN 269

[Close]
BLAST of CSPI02G23870 vs. TAIR10
Match: AT5G10960.1 (AT5G10960.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 442.2 bits (1136), Expect = 2.3e-124
Identity = 204/268 (76.12%), Postives = 236/268 (88.06%), Query Frame = 1 

Query: 6   KGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTL 65
           K DSI IREVW+ NL EEFALIR IVDKF+YIAMDTEFPGVVL+P+ TFK  ND NYRTL
Sbjct: 6   KEDSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTL 65

Query: 66  KDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIELLRQCG 125
           K+NV++LKLIQ+GLTFSDE+GNLPTCGTDKFCIWQFNFREFNIG DI+AS+SIELLRQCG
Sbjct: 66  KENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCG 125

Query: 126 IDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAG 185
           IDF+KN E+GIDV RFGEL+MSSG+VLND ++WVTFH GYDFGYL+KLLTC+ LP  QA 
Sbjct: 126 IDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQAD 185

Query: 186 FFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRK 245
           FF+L+ VYFP +YDIKHLM FCN L GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRK
Sbjct: 186 FFKLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSFRK 245

Query: 246 LRDTFFNGSIQKYAGVLYGLGVENGQRT 274
           L++ +F GS +KY GVLYGLGVE+G  T
Sbjct: 246 LKERYFPGSTEKYTGVLYGLGVEDGTTT 273

[Close]
BLAST of CSPI02G23870 vs. TAIR10
Match: AT1G15920.2 (AT1G15920.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 353.6 bits (906), Expect = 1.1e-97
Identity = 167/264 (63.26%), Postives = 206/264 (78.03%), Query Frame = 1 

Query: 8   DSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNIN------DFN 67
           D+I+IREVWN NLE+E ALI   +D F Y+AMDTEFPG+V + +    N N      ++N
Sbjct: 12  DTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYN 71

Query: 68  YRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIELL 127
           Y TLK NV MLKLIQLGLT SDE GNLPTCGT+K CIWQFNFREFN+ SD+FA DSIELL
Sbjct: 72  YDTLKANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELL 131

Query: 128 RQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPN 187
           R+  ID +KNNE G+D  RF ELLM SGVVLND ++WVTFH GYDFGYLLKLL+ + LP 
Sbjct: 132 RKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPE 191

Query: 188 DQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTAC 247
           + + FF+ +  +FPV+YDIK+LM FC +L+GGL K+AELL V+R+G+ HQAGSDSLLT  
Sbjct: 192 EISDFFDQMEKFFPVVYDIKYLMGFCTNLYGGLEKIAELLGVKRVGISHQAGSDSLLTLR 251

Query: 248 TFRKLRDTFFNGSIQKYAGVLYGL 266
           TF K+++ FF GS+ KY+G L+GL
Sbjct: 252 TFIKMKEFFFTGSLLKYSGFLFGL 275

[Close]
BLAST of CSPI02G23870 vs. TAIR10
Match: AT3G44260.1 (AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 279.6 bits (714), Expect = 2.0e-75
Identity = 143/269 (53.16%), Postives = 188/269 (69.89%), Query Frame = 1 

Query: 5   PKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRT 64
           P G ++  REVW  NLE EF LI  I+D + +I+MDTEFPGV+ +    F N +D  Y  
Sbjct: 12  PDGVTVVTREVWAENLESEFELISEIIDDYPFISMDTEFPGVIFKSDLRFTNPDDL-YTL 71

Query: 65  LKDNVEMLKLIQLGLTFSDEDGNLPTCGTD--KFCIWQFNFREFNIGSDIFASDSIELLR 124
           LK NV+ L LIQ+GLT SD +GNLP  G D  +  IW+FNFR+F++  D  A DSIELLR
Sbjct: 72  LKANVDALSLIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVARDAHAPDSIELLR 131

Query: 125 QCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPND 184
           + GIDF++N  +G++  RF EL+MSSG+V N++V+WVTFHS YDFGYL+K+LT R LP  
Sbjct: 132 RQGIDFERNCRDGVESERFAELMMSSGLVCNEEVSWVTFHSAYDFGYLMKILTRRELPGA 191

Query: 185 QAGFFELINVYF-PVLYDIKHLMKFC-NSLHGGLNKLAELLEVER-IGVCHQAGSDSLLT 244
              F  ++ V F   +YD+KH+MKFC   L GGL+++A  LEV R +G CHQAGSDSLLT
Sbjct: 192 LGEFKRVMRVLFGERVYDVKHMMKFCERRLFGGLDRVARTLEVNRAVGKCHQAGSDSLLT 251

Query: 245 ACTFRKLRDTFF-NGSIQKYAGVLYGLGV 268
              F+++RD +F     +K+AGVLYGL V
Sbjct: 252 WHAFQRMRDLYFVQDGPEKHAGVLYGLEV 279

[Close]
BLAST of CSPI02G23870 vs. NCBI nr
Match: gi|449441868|ref|XP_004138704.1| (PREDICTED: probable CCR4-associated factor 1 homolog 7 [Cucumis sativus])

HSP 1 Score: 575.5 bits (1482), Expect = 5.0e-161
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 1 

Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF
Sbjct: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL
Sbjct: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180

Query: 181 NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 275
           CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN
Sbjct: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 274

[Close]
BLAST of CSPI02G23870 vs. NCBI nr
Match: gi|659088972|ref|XP_008445259.1| (PREDICTED: probable CCR4-associated factor 1 homolog 7 [Cucumis melo])

HSP 1 Score: 574.3 bits (1479), Expect = 1.1e-160
Identity = 273/274 (99.64%), Postives = 274/274 (100.00%), Query Frame = 1 

Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF
Sbjct: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL
Sbjct: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180

Query: 181 NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           NDQAGFFELINVYFPV+YDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 NDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 275
           CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN
Sbjct: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 274

[Close]
BLAST of CSPI02G23870 vs. NCBI nr
Match: gi|703074973|ref|XP_010089956.1| (putative CCR4-associated factor 1-7-like protein [Morus notabilis])

HSP 1 Score: 521.9 bits (1343), Expect = 6.6e-145
Identity = 244/276 (88.41%), Postives = 263/276 (95.29%), Query Frame = 1 

Query: 1   MSILPK--GDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNIN 60
           MSIL K  GDSIQIREVWN NLEEEFALIR IVDK+NY+AMDTEFPGVVLRP+G FKNIN
Sbjct: 1   MSILTKGDGDSIQIREVWNDNLEEEFALIREIVDKYNYVAMDTEFPGVVLRPVGNFKNIN 60

Query: 61  DFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSI 120
           D+NY+TLKDNV+MLKLIQLGLTFSDE+GNLPTCGTDKFCIWQFNFREFNI  DIFASDSI
Sbjct: 61  DYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSI 120

Query: 121 ELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRG 180
           ELLRQCGIDF+KNNE+GIDVNRFGELLMSSG+VLND V+WVTFHSGYDFGYLLKLLTC+ 
Sbjct: 121 ELLRQCGIDFKKNNEKGIDVNRFGELLMSSGIVLNDGVHWVTFHSGYDFGYLLKLLTCQS 180

Query: 181 LPNDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLL 240
           LP+ QAGFF+LINVYFP++YDIKHLMKFCNSLHGGLNKLAELLEVER+GVCHQAGSDSLL
Sbjct: 181 LPDTQAGFFDLINVYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLL 240

Query: 241 TACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 275
           T+CTFRKLRDTFFNGS +KYAGVLYGLGVENGQ TN
Sbjct: 241 TSCTFRKLRDTFFNGSTEKYAGVLYGLGVENGQTTN 276

[Close]
BLAST of CSPI02G23870 vs. NCBI nr
Match: gi|802626869|ref|XP_012076450.1| (PREDICTED: probable CCR4-associated factor 1 homolog 7 [Jatropha curcas])

HSP 1 Score: 521.5 bits (1342), Expect = 8.6e-145
Identity = 244/275 (88.73%), Postives = 261/275 (94.91%), Query Frame = 1 

Query: 1   MSILPKGD-SIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNIND 60
           MSI+PK D SIQIREVWN NLEEEFALIR IVD+FNY+AMDTEFPGVVLRP+G FKNIND
Sbjct: 1   MSIIPKNDDSIQIREVWNDNLEEEFALIREIVDQFNYVAMDTEFPGVVLRPVGNFKNIND 60

Query: 61  FNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIE 120
           +NY+TLKDNV+MLKLIQLGLTFSDE+GNLPTCGTDKFCIWQFNFREFNI  DIFASDSIE
Sbjct: 61  YNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIE 120

Query: 121 LLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGL 180
           LLRQCGIDF+KNNE+GIDVNRFGELLMSSGVVLND V WVTFHSGYDFGYLLKLLTCR L
Sbjct: 121 LLRQCGIDFKKNNEKGIDVNRFGELLMSSGVVLNDSVYWVTFHSGYDFGYLLKLLTCRSL 180

Query: 181 PNDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLT 240
           P+ QAGFF+LIN+YFPV+YDIKHLMKFCNSLHGGLNKLAELLEVER+GVCHQAGSDSLLT
Sbjct: 181 PDTQAGFFDLINMYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLT 240

Query: 241 ACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 275
           +CTFRKLRD FFNGS +KYAGVLYGLGVENGQ TN
Sbjct: 241 SCTFRKLRDNFFNGSAEKYAGVLYGLGVENGQNTN 275

[Close]
BLAST of CSPI02G23870 vs. NCBI nr
Match: gi|1000974262|ref|XP_015572459.1| (PREDICTED: probable CCR4-associated factor 1 homolog 7 [Ricinus communis])

HSP 1 Score: 520.4 bits (1339), Expect = 1.9e-144
Identity = 238/273 (87.18%), Postives = 259/273 (94.87%), Query Frame = 1 

Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MSI+PKGDSI IREVWN NLEEEF LIR IVD+FNY+AMDTEFPGVVLRP+G FKNIND+
Sbjct: 1   MSIIPKGDSIHIREVWNDNLEEEFTLIREIVDQFNYVAMDTEFPGVVLRPVGNFKNINDY 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           NY+TLKDNV+MLKLIQLGLTFSDE+GNLPTCGTDKFCIWQFNFREFNI  DIFASDSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           LRQCGIDF+KNNE+GIDVNRFGEL+MSSG+VLND V+WVTFHSGYDFGYLLKLLTCR LP
Sbjct: 121 LRQCGIDFKKNNEKGIDVNRFGELMMSSGIVLNDGVHWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 181 NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           + QAGFF+LIN YFP++YDIKHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+
Sbjct: 181 DTQAGFFDLINTYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRT 274
           CTFRKLRD FFNGS +KYAGVLYGLGVENGQ T
Sbjct: 241 CTFRKLRDNFFNGSTEKYAGVLYGLGVENGQNT 273

The following BLAST results are available for this feature:
BLAST of CSPI02G23870 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CAF1G_ARATH4.5e-12576.10Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana GN=CAF1-7 PE... [more]
CAF1F_ARATH1.7e-12475.28Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana GN=CAF1-6 PE... [more]
CAF1J_ARATH4.2e-12376.12Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana GN=CAF1-10 ... [more]
CAF1B_ARATH2.0e-9663.26Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana GN=CAF1-2 PE... [more]
CNOT7_HUMAN6.7e-8155.39CCR4-NOT transcription complex subunit 7 OS=Homo sapiens GN=CNOT7 PE=1 SV=3[more]
BLAST of CSPI02G23870 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LMH2_CUCSA3.5e-161100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G382610 PE=4 SV=1[more]
W9QRX8_9ROSA4.6e-14588.41Putative CCR4-associated factor 1-7-like protein OS=Morus notabilis GN=L484_0144... [more]
A0A067KMK9_JATCU6.0e-14588.73Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07101 PE=4 SV=1[more]
B9RNX3_RICCO1.3e-14487.18Ccr4-associated factor, putative OS=Ricinus communis GN=RCOM_0921770 PE=4 SV=1[more]
A0A0D2UK39_GOSRA1.9e-14386.13Uncharacterized protein OS=Gossypium raimondii GN=B456_010G244300 PE=4 SV=1[more]
BLAST of CSPI02G23870 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G32070.12.5e-12676.10 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT1G80780.31.8e-12475.09 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT5G10960.12.3e-12476.12 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT1G15920.21.1e-9763.26 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT3G44260.12.0e-7553.16 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
BLAST of CSPI02G23870 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449441868|ref|XP_004138704.1|5.0e-161100.00PREDICTED: probable CCR4-associated factor 1 homolog 7 [Cucumis sativus][more]
gi|659088972|ref|XP_008445259.1|1.1e-16099.64PREDICTED: probable CCR4-associated factor 1 homolog 7 [Cucumis melo][more]
gi|703074973|ref|XP_010089956.1|6.6e-14588.41putative CCR4-associated factor 1-7-like protein [Morus notabilis][more]
gi|802626869|ref|XP_012076450.1|8.6e-14588.73PREDICTED: probable CCR4-associated factor 1 homolog 7 [Jatropha curcas][more]
gi|1000974262|ref|XP_015572459.1|1.9e-14487.18PREDICTED: probable CCR4-associated factor 1 homolog 7 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006941RNase_CAF1
IPR012337RNaseH-like_sf
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051252 regulation of RNA metabolic process
biological_process GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic
cellular_component GO:0005634 nucleus
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004535 poly(A)-specific ribonuclease activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G23870.1CSPI02G23870.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006941Ribonuclease CAF1PFAMPF04857CAF1coord: 161..243
score: 2.7E-6coord: 15..136
score: 2.2
IPR012337Ribonuclease H-like domainGENE3DG3DSA:3.30.420.10coord: 5..267
score: 5.9E
IPR012337Ribonuclease H-like domainunknownSSF53098Ribonuclease H-likecoord: 12..265
score: 4.62
NoneNo IPR availablePANTHERPTHR10797CCR4-NOT TRANSCRIPTION COMPLEX SUBUNITcoord: 1..274
score: 5.7E

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI02G23870Wild cucumber (PI 183967)cpicpiB075
CSPI02G23870Wild cucumber (PI 183967)cpicpiB098
CSPI02G23870Cucumber (Gy14) v1cgycpiB239
CSPI02G23870Cucumber (Gy14) v1cgycpiB408
CSPI02G23870Cucurbita maxima (Rimu)cmacpiB012
CSPI02G23870Cucurbita maxima (Rimu)cmacpiB165
CSPI02G23870Cucurbita maxima (Rimu)cmacpiB801
CSPI02G23870Cucurbita moschata (Rifu)cmocpiB004
CSPI02G23870Cucurbita moschata (Rifu)cmocpiB150
CSPI02G23870Cucurbita moschata (Rifu)cmocpiB788
CSPI02G23870Cucumber (Chinese Long) v2cpicuB065
CSPI02G23870Cucumber (Chinese Long) v2cpicuB081
CSPI02G23870Melon (DHL92) v3.5.1cpimeB107
CSPI02G23870Melon (DHL92) v3.5.1cpimeB118
CSPI02G23870Melon (DHL92) v3.5.1cpimeB149
CSPI02G23870Watermelon (Charleston Gray)cpiwcgB145
CSPI02G23870Watermelon (Charleston Gray)cpiwcgB168
CSPI02G23870Watermelon (97103) v1cpiwmB112
CSPI02G23870Watermelon (97103) v1cpiwmB130
CSPI02G23870Cucurbita pepo (Zucchini)cpecpiB101
CSPI02G23870Cucurbita pepo (Zucchini)cpecpiB130
CSPI02G23870Cucurbita pepo (Zucchini)cpecpiB544
CSPI02G23870Cucurbita pepo (Zucchini)cpecpiB774
CSPI02G23870Cucurbita pepo (Zucchini)cpecpiB811
CSPI02G23870Bottle gourd (USVL1VR-Ls)cpilsiB119
CSPI02G23870Bottle gourd (USVL1VR-Ls)cpilsiB139
CSPI02G23870Melon (DHL92) v3.6.1cpimedB114
CSPI02G23870Melon (DHL92) v3.6.1cpimedB143
CSPI02G23870Cucumber (Gy14) v2cgybcpiB057
CSPI02G23870Cucumber (Gy14) v2cgybcpiB164
CSPI02G23870Cucumber (Gy14) v2cgybcpiB311
CSPI02G23870Silver-seed gourdcarcpiB0155
CSPI02G23870Silver-seed gourdcarcpiB0663
CSPI02G23870Silver-seed gourdcarcpiB1010
CSPI02G23870Cucumber (Chinese Long) v3cpicucB081
CSPI02G23870Cucumber (Chinese Long) v3cpicucB104
CSPI02G23870Watermelon (97103) v2cpiwmbB138
CSPI02G23870Watermelon (97103) v2cpiwmbB162
CSPI02G23870Watermelon (97103) v2cpiwmbB173
CSPI02G23870Wax gourdcpiwgoB154
CSPI02G23870Wax gourdcpiwgoB199