CSPI02G12960.1 (mRNA) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI02G12960.1
Type	mRNA
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	SAUR-like auxin-responsive protein family
Location	Chr2 : 13138308 .. 13138773 (+)
Sequence length	294

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAATCAAATTTAGACATGGGAATTCGTTTGCCTTCAGTCCTCCTCAGCGCCAAGCAAATTCTCAAGATGAAAACTGTTTCTACGAGATGTCAGTCTGATGTTCCCAAAGGCCATATTCCGGTATATGTTGGCGAAAACCAAAGAAAGAGGTTTTTGGTTCCCATTTCTTACTTGAATCATCCTTCATTTGTGAATTTGCTTAGTAGAGCTGAAGAAGAGTTTGGATTCAGCCATCCAACAGGAGGTTTGACCATTCCATGCAAAGAAGAGGCCTTCATTGATGTCACTTCGAGATTGCATATTTCATGAAGGATTGAGAACACAGAGAATGTACTCTCGACAGTTTTGACAACTTTTCTTTTCATTTTTTGTCTATAGGAGATAGAGTTGAATATCACTGTAAAGGGAACTTCAATGTGTAAAGTGACACACATGAGTTGCAATGGAGTTGAATTCTTTTGTCC

mRNA sequence

ATGGGAATTCGTTTGCCTTCAGTCCTCCTCAGCGCCAAGCAAATTCTCAAGATGAAAACTGTTTCTACGAGATGTCAGTCTGATGTTCCCAAAGGCCATATTCCGGTATATGTTGGCGAAAACCAAAGAAAGAGGTTTTTGGTTCCCATTTCTTACTTGAATCATCCTTCATTTGTGAATTTGCTTAGTAGAGCTGAAGAAGAGTTTGGATTCAGCCATCCAACAGGAGGTTTGACCATTCCATGCAAAGAAGAGGCCTTCATTGATGTCACTTCGAGATTGCATATTTCATGA

Coding sequence (CDS)

ATGGGAATTCGTTTGCCTTCAGTCCTCCTCAGCGCCAAGCAAATTCTCAAGATGAAAACTGTTTCTACGAGATGTCAGTCTGATGTTCCCAAAGGCCATATTCCGGTATATGTTGGCGAAAACCAAAGAAAGAGGTTTTTGGTTCCCATTTCTTACTTGAATCATCCTTCATTTGTGAATTTGCTTAGTAGAGCTGAAGAAGAGTTTGGATTCAGCCATCCAACAGGAGGTTTGACCATTCCATGCAAAGAAGAGGCCTTCATTGATGTCACTTCGAGATTGCATATTTCATGA

Homology

[Close]

BLAST of CSPI02G12960.1 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 7.1e-25
Identity = 56/86 (65.12%), Postives = 66/86 (76.74%), Query Frame = 1


Query: 9  LLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEE 68
          LL AK+IL     ST   S  PKG + VYVGE+Q+KR+LVP+SYLN PSF  LLS++EEE
Sbjct: 7  LLGAKKILSR---STGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEE 66

Query: 69 FGFSHPTGGLTIPCKEEAFIDVTSRL 95
          FGF HP GGLTIPC E+ FI+VTSRL
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CSPI02G12960.1 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 7.1e-25
Identity = 55/87 (63.22%), Postives = 66/87 (75.86%), Query Frame = 1


Query: 9  LLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEE 68
          LL AK+IL     +    S  PKG + VYVGE+Q+KR+LVP+SYLN PSF  LLS++EEE
Sbjct: 7  LLVAKKILSRSAAAV---SAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEE 66

Query: 69 FGFSHPTGGLTIPCKEEAFIDVTSRLH 96
          FGF HP GGLTIPC E+ FI+VTSRLH
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRLH 90

[Close]

BLAST of CSPI02G12960.1 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 9.3e-25
Identity = 56/85 (65.88%), Postives = 65/85 (76.47%), Query Frame = 1


Query: 9  LLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEE 68
          LL AK+IL     ST   S  PKG + VYVGE+Q+KR+LVPISYLN PSF  LLS++EEE
Sbjct: 7  LLGAKKILSR---STTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEE 66

Query: 69 FGFSHPTGGLTIPCKEEAFIDVTSR 94
          FGF HP GGLTIPC E+ FI+VTSR
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSR 88

[Close]

BLAST of CSPI02G12960.1 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.6e-24
Identity = 54/86 (62.79%), Postives = 66/86 (76.74%), Query Frame = 1


Query: 9  LLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEE 68
          LL AK+IL   T +    S  PKG + VYVGE+Q+KR+LVP+SYLN PSF  LLS++E+E
Sbjct: 7  LLGAKKILSRSTAAV---SAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDE 66

Query: 69 FGFSHPTGGLTIPCKEEAFIDVTSRL 95
          FGF HP GGLTIPC E+ FI+VTSRL
Sbjct: 67 FGFDHPMGGLTIPCHEDTFINVTSRL 89

[Close]

BLAST of CSPI02G12960.1 vs. Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 2.1e-24
Identity = 55/86 (63.95%), Postives = 67/86 (77.91%), Query Frame = 1


Query: 9  LLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEE 68
          LL AK+IL     ST   S  PKG + VYVGE+Q+KR+LVP+SYL+ PSF  LLS++EEE
Sbjct: 7  LLGAKKILSR---STAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 69 FGFSHPTGGLTIPCKEEAFIDVTSRL 95
          FGF+HP GGLTIPC E+ FI+VTSRL
Sbjct: 67 FGFAHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CSPI02G12960.1 vs. TrEMBL
Match: A0A0A0LM65_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258730 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 8.4e-49
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1


Query: 1  MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVN 60
          MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVN
Sbjct: 1  MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVN 60

Query: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 98
          LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS
Sbjct: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 97

[Close]

BLAST of CSPI02G12960.1 vs. TrEMBL
Match: A0A0A0LLF7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258750 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.0e-46
Identity = 93/97 (95.88%), Postives = 94/97 (96.91%), Query Frame = 1


Query: 1  MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVN 60
          MGIR PSVLLSAKQILKMK+VS RCQSDVPKGHIPVYVGENQRKRF VPISYLNHPSFVN
Sbjct: 1  MGIRFPSVLLSAKQILKMKSVSIRCQSDVPKGHIPVYVGENQRKRFFVPISYLNHPSFVN 60

Query: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 98
          LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS
Sbjct: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 97

[Close]

BLAST of CSPI02G12960.1 vs. TrEMBL
Match: A0A0A0LIZ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258710 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 9.3e-40
Identity = 80/97 (82.47%), Postives = 88/97 (90.72%), Query Frame = 1


Query: 1  MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVN 60
          MG RLPS+L SAKQILK +++S RCQS VPKGHI VYVGE Q+KRFLVPISYLNHPSF++
Sbjct: 1  MGFRLPSILFSAKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLD 60

Query: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 98
          LL RAEEEFGF+HPTGGLTIPCKEEAFIDVTSRLH S
Sbjct: 61 LLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLHTS 97

[Close]

BLAST of CSPI02G12960.1 vs. TrEMBL
Match: A0A0A0LPH3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 5.1e-38
Identity = 72/97 (74.23%), Postives = 92/97 (94.85%), Query Frame = 1


Query: 1  MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVN 60
          MGIR+PS+LL+AKQI +M++VSTRC S++PKGHI VYVGE +RKRF+VP+SYLNHP+F++
Sbjct: 1  MGIRMPSLLLNAKQIFRMQSVSTRCHSNIPKGHIAVYVGEIERKRFVVPVSYLNHPTFLS 60

Query: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 98
          LL+RAEEEFGF+HP+GGLTIPCKE+AFID+TS+LH S
Sbjct: 61 LLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSKLHTS 97

[Close]

BLAST of CSPI02G12960.1 vs. TrEMBL
Match: A0A0A0LJ92_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258690 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.1e-37
Identity = 78/97 (80.41%), Postives = 86/97 (88.66%), Query Frame = 1


Query: 1  MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVN 60
          MGIRLPSVL +AKQ+LKM++VS R QS VPKGHIPVYVGE  RKRF VPISYL+HPSFV 
Sbjct: 1  MGIRLPSVLAAAKQVLKMQSVSARSQSIVPKGHIPVYVGETDRKRFFVPISYLSHPSFVE 60

Query: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 98
          LL++AEEEFGFSHPTGGL IPCKEEAFIDVTS+L  S
Sbjct: 61 LLNKAEEEFGFSHPTGGLRIPCKEEAFIDVTSKLQSS 97

[Close]

BLAST of CSPI02G12960.1 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 121.7 bits (304), Expect = 2.5e-28
Identity = 58/99 (58.59%), Postives = 73/99 (73.74%), Query Frame = 1


Query: 1  MGIRLPSVLLSAKQILK----MKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHP 60
          M IR+P VL S+KQIL+    + + S+    DVPKG++ VYVGE   KRF+VP+SYL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFVNLLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLH 96
          SF +LL +AEEEFGF HP GGLTIPC EE FID+ SR +
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASRFN 99

[Close]

BLAST of CSPI02G12960.1 vs. TAIR10
Match: AT5G18060.1 (AT5G18060.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.4 bits (285), Expect = 4.0e-26
Identity = 55/87 (63.22%), Postives = 66/87 (75.86%), Query Frame = 1


Query: 9  LLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEE 68
          LL AK+IL     +    S  PKG + VYVGE+Q+KR+LVP+SYLN PSF  LLS++EEE
Sbjct: 7  LLVAKKILSRSAAAV---SAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEE 66

Query: 69 FGFSHPTGGLTIPCKEEAFIDVTSRLH 96
          FGF HP GGLTIPC E+ FI+VTSRLH
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRLH 90

[Close]

BLAST of CSPI02G12960.1 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.4 bits (285), Expect = 4.0e-26
Identity = 56/86 (65.12%), Postives = 66/86 (76.74%), Query Frame = 1


Query: 9  LLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEE 68
          LL AK+IL     ST   S  PKG + VYVGE+Q+KR+LVP+SYLN PSF  LLS++EEE
Sbjct: 7  LLGAKKILSR---STGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEE 66

Query: 69 FGFSHPTGGLTIPCKEEAFIDVTSRL 95
          FGF HP GGLTIPC E+ FI+VTSRL
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CSPI02G12960.1 vs. TAIR10
Match: AT5G18020.1 (AT5G18020.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.0 bits (284), Expect = 5.2e-26
Identity = 56/85 (65.88%), Postives = 65/85 (76.47%), Query Frame = 1


Query: 9  LLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEE 68
          LL AK+IL     ST   S  PKG + VYVGE+Q+KR+LVPISYLN PSF  LLS++EEE
Sbjct: 7  LLGAKKILSR---STTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEE 66

Query: 69 FGFSHPTGGLTIPCKEEAFIDVTSR 94
          FGF HP GGLTIPC E+ FI+VTSR
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSR 88

[Close]

BLAST of CSPI02G12960.1 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.0 bits (284), Expect = 5.2e-26
Identity = 57/104 (54.81%), Postives = 76/104 (73.08%), Query Frame = 1


Query: 1   MGIRLPSVLLSAKQILKMKTVSTRCQSD------VPKGHIPVYVGEN---QRKRFLVPIS 60
           MG+   ++  + KQILK+ +++ R ++       VPKGH+ VYVGE    ++KRF+VPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNHPSFVNLLSRAEEEFGFSHPTGGLTIPCKEEAFID-VTSRL 95
           +LNHPSF   LSRAEEEFGF+HP GGLTIPC+EE F+D + SRL
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRL 104

[Close]

BLAST of CSPI02G12960.1 vs. NCBI nr
Match: gi|778669591|ref|XP_011649272.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 200.7 bits (509), Expect = 1.2e-48
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1


Query: 1  MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVN 60
          MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVN
Sbjct: 1  MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVN 60

Query: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 98
          LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS
Sbjct: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 97

[Close]

BLAST of CSPI02G12960.1 vs. NCBI nr
Match: gi|659115594|ref|XP_008457634.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 198.7 bits (504), Expect = 4.6e-48
Identity = 96/97 (98.97%), Postives = 97/97 (100.00%), Query Frame = 1


Query: 1  MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVN 60
          MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFV+
Sbjct: 1  MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVH 60

Query: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 98
          LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS
Sbjct: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 97

[Close]

BLAST of CSPI02G12960.1 vs. NCBI nr
Match: gi|778669595|ref|XP_011649275.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 193.7 bits (491), Expect = 1.5e-46
Identity = 93/97 (95.88%), Postives = 94/97 (96.91%), Query Frame = 1


Query: 1  MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVN 60
          MGIR PSVLLSAKQILKMK+VS RCQSDVPKGHIPVYVGENQRKRF VPISYLNHPSFVN
Sbjct: 1  MGIRFPSVLLSAKQILKMKSVSIRCQSDVPKGHIPVYVGENQRKRFFVPISYLNHPSFVN 60

Query: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 98
          LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS
Sbjct: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 97

[Close]

BLAST of CSPI02G12960.1 vs. NCBI nr
Match: gi|449458550|ref|XP_004147010.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 170.6 bits (431), Expect = 1.3e-39
Identity = 80/97 (82.47%), Postives = 88/97 (90.72%), Query Frame = 1


Query: 1  MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVN 60
          MG RLPS+L SAKQILK +++S RCQS VPKGHI VYVGE Q+KRFLVPISYLNHPSF++
Sbjct: 1  MGFRLPSILFSAKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLD 60

Query: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 98
          LL RAEEEFGF+HPTGGLTIPCKEEAFIDVTSRLH S
Sbjct: 61 LLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLHTS 97

[Close]

BLAST of CSPI02G12960.1 vs. NCBI nr
Match: gi|659115590|ref|XP_008457631.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 168.3 bits (425), Expect = 6.6e-39
Identity = 79/97 (81.44%), Postives = 87/97 (89.69%), Query Frame = 1


Query: 1  MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVN 60
          MG RLPS+L SAKQILK +++S RCQS VPKGHI VYVGE Q+ RFLVPISYLNHPSF++
Sbjct: 1  MGFRLPSILFSAKQILKAQSISGRCQSSVPKGHIAVYVGEVQKTRFLVPISYLNHPSFLD 60

Query: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 98
          LL RAEEEFGF+HPTGGLTIPCKEEAFIDVTSRLH S
Sbjct: 61 LLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLHTS 97

The following BLAST results are available for this feature:

BLAST of CSPI02G12960.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU24_ARATH	7.1e-25	65.12	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU23_ARATH	7.1e-25	63.22	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1	[more]
SAU20_ARATH	9.3e-25	65.88	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
SAU22_ARATH	1.6e-24	62.79	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]
SAU19_ARATH	2.1e-24	63.95	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1	[more]

BLAST of CSPI02G12960.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LM65_CUCSA	8.4e-49	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258730 PE=4 SV=1	[more]
A0A0A0LLF7_CUCSA	1.0e-46	95.88	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258750 PE=4 SV=1	[more]
A0A0A0LIZ4_CUCSA	9.3e-40	82.47	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258710 PE=4 SV=1	[more]
A0A0A0LPH3_CUCSA	5.1e-38	74.23	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1	[more]
A0A0A0LJ92_CUCSA	1.1e-37	80.41	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258690 PE=4 SV=1	[more]

BLAST of CSPI02G12960.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38840.1	2.5e-28	58.59	SAUR-like auxin-responsive protein family	[more]
AT5G18060.1	4.0e-26	63.22	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	4.0e-26	65.12	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	5.2e-26	65.88	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	5.2e-26	54.81	SAUR-like auxin-responsive protein family	[more]

BLAST of CSPI02G12960.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778669591\|ref\|XP_011649272.1\|	1.2e-48	100.00	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|659115594\|ref\|XP_008457634.1\|	4.6e-48	98.97	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|778669595\|ref\|XP_011649275.1\|	1.5e-46	95.88	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|449458550\|ref\|XP_004147010.1\|	1.3e-39	82.47	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|659115590\|ref\|XP_008457631.1\|	6.6e-39	81.44	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI02G12960	CSPI02G12960	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI02G12960.1	CSPI02G12960.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI02G12960.1.utr5p1	CSPI02G12960.1.utr5p1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI02G12960.1.cds1	CSPI02G12960.1.cds1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI02G12960.1.utr3p1	CSPI02G12960.1.utr3p1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 13..93 score: 5.3
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 2..97 score: 1.6
None	No IPR available	PANTHER	PTHR31929:SF3	SUBFAMILY NOT NAMED	coord: 2..97 score: 1.6