CSPI02G12960 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI02G12960
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	SAUR-like auxin-responsive protein family
Location	Chr2 : 13138308 .. 13138773 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAATCAAATTTAGACATGGGAATTCGTTTGCCTTCAGTCCTCCTCAGCGCCAAGCAAATTCTCAAGATGAAAACTGTTTCTACGAGATGTCAGTCTGATGTTCCCAAAGGCCATATTCCGGTATATGTTGGCGAAAACCAAAGAAAGAGGTTTTTGGTTCCCATTTCTTACTTGAATCATCCTTCATTTGTGAATTTGCTTAGTAGAGCTGAAGAAGAGTTTGGATTCAGCCATCCAACAGGAGGTTTGACCATTCCATGCAAAGAAGAGGCCTTCATTGATGTCACTTCGAGATTGCATATTTCATGAAGGATTGAGAACACAGAGAATGTACTCTCGACAGTTTTGACAACTTTTCTTTTCATTTTTTGTCTATAGGAGATAGAGTTGAATATCACTGTAAAGGGAACTTCAATGTGTAAAGTGACACACATGAGTTGCAATGGAGTTGAATTCTTTTGTCC

mRNA sequence

ATGGGAATTCGTTTGCCTTCAGTCCTCCTCAGCGCCAAGCAAATTCTCAAGATGAAAACTGTTTCTACGAGATGTCAGTCTGATGTTCCCAAAGGCCATATTCCGGTATATGTTGGCGAAAACCAAAGAAAGAGGTTTTTGGTTCCCATTTCTTACTTGAATCATCCTTCATTTGTGAATTTGCTTAGTAGAGCTGAAGAAGAGTTTGGATTCAGCCATCCAACAGGAGGTTTGACCATTCCATGCAAAGAAGAGGCCTTCATTGATGTCACTTCGAGATTGCATATTTCATGA

Coding sequence (CDS)

ATGGGAATTCGTTTGCCTTCAGTCCTCCTCAGCGCCAAGCAAATTCTCAAGATGAAAACTGTTTCTACGAGATGTCAGTCTGATGTTCCCAAAGGCCATATTCCGGTATATGTTGGCGAAAACCAAAGAAAGAGGTTTTTGGTTCCCATTTCTTACTTGAATCATCCTTCATTTGTGAATTTGCTTAGTAGAGCTGAAGAAGAGTTTGGATTCAGCCATCCAACAGGAGGTTTGACCATTCCATGCAAAGAAGAGGCCTTCATTGATGTCACTTCGAGATTGCATATTTCATGA

Homology

[Close]

BLAST of CSPI02G12960 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 7.1e-25
Identity = 56/86 (65.12%), Postives = 66/86 (76.74%), Query Frame = 1


Query: 9  LLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEE 68
          LL AK+IL     ST   S  PKG + VYVGE+Q+KR+LVP+SYLN PSF  LLS++EEE
Sbjct: 7  LLGAKKILSR---STGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEE 66

Query: 69 FGFSHPTGGLTIPCKEEAFIDVTSRL 95
          FGF HP GGLTIPC E+ FI+VTSRL
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CSPI02G12960 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 7.1e-25
Identity = 55/87 (63.22%), Postives = 66/87 (75.86%), Query Frame = 1


Query: 9  LLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEE 68
          LL AK+IL     +    S  PKG + VYVGE+Q+KR+LVP+SYLN PSF  LLS++EEE
Sbjct: 7  LLVAKKILSRSAAAV---SAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEE 66

Query: 69 FGFSHPTGGLTIPCKEEAFIDVTSRLH 96
          FGF HP GGLTIPC E+ FI+VTSRLH
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRLH 90

[Close]

BLAST of CSPI02G12960 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 9.3e-25
Identity = 56/85 (65.88%), Postives = 65/85 (76.47%), Query Frame = 1


Query: 9  LLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEE 68
          LL AK+IL     ST   S  PKG + VYVGE+Q+KR+LVPISYLN PSF  LLS++EEE
Sbjct: 7  LLGAKKILSR---STTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEE 66

Query: 69 FGFSHPTGGLTIPCKEEAFIDVTSR 94
          FGF HP GGLTIPC E+ FI+VTSR
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSR 88

[Close]

BLAST of CSPI02G12960 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.6e-24
Identity = 54/86 (62.79%), Postives = 66/86 (76.74%), Query Frame = 1


Query: 9  LLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEE 68
          LL AK+IL   T +    S  PKG + VYVGE+Q+KR+LVP+SYLN PSF  LLS++E+E
Sbjct: 7  LLGAKKILSRSTAAV---SAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDE 66

Query: 69 FGFSHPTGGLTIPCKEEAFIDVTSRL 95
          FGF HP GGLTIPC E+ FI+VTSRL
Sbjct: 67 FGFDHPMGGLTIPCHEDTFINVTSRL 89

[Close]

BLAST of CSPI02G12960 vs. Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 2.1e-24
Identity = 55/86 (63.95%), Postives = 67/86 (77.91%), Query Frame = 1


Query: 9  LLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEE 68
          LL AK+IL     ST   S  PKG + VYVGE+Q+KR+LVP+SYL+ PSF  LLS++EEE
Sbjct: 7  LLGAKKILSR---STAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 69 FGFSHPTGGLTIPCKEEAFIDVTSRL 95
          FGF+HP GGLTIPC E+ FI+VTSRL
Sbjct: 67 FGFAHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CSPI02G12960 vs. TrEMBL
Match: A0A0A0LM65_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258730 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 8.4e-49
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1


Query: 1  MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVN 60
          MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVN
Sbjct: 1  MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVN 60

Query: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 98
          LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS
Sbjct: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 97

[Close]

BLAST of CSPI02G12960 vs. TrEMBL
Match: A0A0A0LLF7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258750 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.0e-46
Identity = 93/97 (95.88%), Postives = 94/97 (96.91%), Query Frame = 1


Query: 1  MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVN 60
          MGIR PSVLLSAKQILKMK+VS RCQSDVPKGHIPVYVGENQRKRF VPISYLNHPSFVN
Sbjct: 1  MGIRFPSVLLSAKQILKMKSVSIRCQSDVPKGHIPVYVGENQRKRFFVPISYLNHPSFVN 60

Query: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 98
          LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS
Sbjct: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 97

[Close]

BLAST of CSPI02G12960 vs. TrEMBL
Match: A0A0A0LIZ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258710 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 9.3e-40
Identity = 80/97 (82.47%), Postives = 88/97 (90.72%), Query Frame = 1


Query: 1  MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVN 60
          MG RLPS+L SAKQILK +++S RCQS VPKGHI VYVGE Q+KRFLVPISYLNHPSF++
Sbjct: 1  MGFRLPSILFSAKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLD 60

Query: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 98
          LL RAEEEFGF+HPTGGLTIPCKEEAFIDVTSRLH S
Sbjct: 61 LLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLHTS 97

[Close]

BLAST of CSPI02G12960 vs. TrEMBL
Match: A0A0A0LPH3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 5.1e-38
Identity = 72/97 (74.23%), Postives = 92/97 (94.85%), Query Frame = 1


Query: 1  MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVN 60
          MGIR+PS+LL+AKQI +M++VSTRC S++PKGHI VYVGE +RKRF+VP+SYLNHP+F++
Sbjct: 1  MGIRMPSLLLNAKQIFRMQSVSTRCHSNIPKGHIAVYVGEIERKRFVVPVSYLNHPTFLS 60

Query: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 98
          LL+RAEEEFGF+HP+GGLTIPCKE+AFID+TS+LH S
Sbjct: 61 LLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSKLHTS 97

[Close]

BLAST of CSPI02G12960 vs. TrEMBL
Match: A0A0A0LJ92_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258690 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.1e-37
Identity = 78/97 (80.41%), Postives = 86/97 (88.66%), Query Frame = 1


Query: 1  MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVN 60
          MGIRLPSVL +AKQ+LKM++VS R QS VPKGHIPVYVGE  RKRF VPISYL+HPSFV 
Sbjct: 1  MGIRLPSVLAAAKQVLKMQSVSARSQSIVPKGHIPVYVGETDRKRFFVPISYLSHPSFVE 60

Query: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 98
          LL++AEEEFGFSHPTGGL IPCKEEAFIDVTS+L  S
Sbjct: 61 LLNKAEEEFGFSHPTGGLRIPCKEEAFIDVTSKLQSS 97

[Close]

BLAST of CSPI02G12960 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 121.7 bits (304), Expect = 2.5e-28
Identity = 58/99 (58.59%), Postives = 73/99 (73.74%), Query Frame = 1


Query: 1  MGIRLPSVLLSAKQILK----MKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHP 60
          M IR+P VL S+KQIL+    + + S+    DVPKG++ VYVGE   KRF+VP+SYL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFVNLLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLH 96
          SF +LL +AEEEFGF HP GGLTIPC EE FID+ SR +
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASRFN 99

[Close]

BLAST of CSPI02G12960 vs. TAIR10
Match: AT5G18060.1 (AT5G18060.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.4 bits (285), Expect = 4.0e-26
Identity = 55/87 (63.22%), Postives = 66/87 (75.86%), Query Frame = 1


Query: 9  LLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEE 68
          LL AK+IL     +    S  PKG + VYVGE+Q+KR+LVP+SYLN PSF  LLS++EEE
Sbjct: 7  LLVAKKILSRSAAAV---SAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEE 66

Query: 69 FGFSHPTGGLTIPCKEEAFIDVTSRLH 96
          FGF HP GGLTIPC E+ FI+VTSRLH
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRLH 90

[Close]

BLAST of CSPI02G12960 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.4 bits (285), Expect = 4.0e-26
Identity = 56/86 (65.12%), Postives = 66/86 (76.74%), Query Frame = 1


Query: 9  LLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEE 68
          LL AK+IL     ST   S  PKG + VYVGE+Q+KR+LVP+SYLN PSF  LLS++EEE
Sbjct: 7  LLGAKKILSR---STGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEE 66

Query: 69 FGFSHPTGGLTIPCKEEAFIDVTSRL 95
          FGF HP GGLTIPC E+ FI+VTSRL
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CSPI02G12960 vs. TAIR10
Match: AT5G18020.1 (AT5G18020.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.0 bits (284), Expect = 5.2e-26
Identity = 56/85 (65.88%), Postives = 65/85 (76.47%), Query Frame = 1


Query: 9  LLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEE 68
          LL AK+IL     ST   S  PKG + VYVGE+Q+KR+LVPISYLN PSF  LLS++EEE
Sbjct: 7  LLGAKKILSR---STTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEE 66

Query: 69 FGFSHPTGGLTIPCKEEAFIDVTSR 94
          FGF HP GGLTIPC E+ FI+VTSR
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSR 88

[Close]

BLAST of CSPI02G12960 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.0 bits (284), Expect = 5.2e-26
Identity = 57/104 (54.81%), Postives = 76/104 (73.08%), Query Frame = 1


Query: 1   MGIRLPSVLLSAKQILKMKTVSTRCQSD------VPKGHIPVYVGEN---QRKRFLVPIS 60
           MG+   ++  + KQILK+ +++ R ++       VPKGH+ VYVGE    ++KRF+VPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNHPSFVNLLSRAEEEFGFSHPTGGLTIPCKEEAFID-VTSRL 95
           +LNHPSF   LSRAEEEFGF+HP GGLTIPC+EE F+D + SRL
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRL 104

[Close]

BLAST of CSPI02G12960 vs. NCBI nr
Match: gi|778669591|ref|XP_011649272.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 200.7 bits (509), Expect = 1.2e-48
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1


Query: 1  MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVN 60
          MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVN
Sbjct: 1  MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVN 60

Query: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 98
          LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS
Sbjct: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 97

[Close]

BLAST of CSPI02G12960 vs. NCBI nr
Match: gi|659115594|ref|XP_008457634.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 198.7 bits (504), Expect = 4.6e-48
Identity = 96/97 (98.97%), Postives = 97/97 (100.00%), Query Frame = 1


Query: 1  MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVN 60
          MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFV+
Sbjct: 1  MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVH 60

Query: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 98
          LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS
Sbjct: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 97

[Close]

BLAST of CSPI02G12960 vs. NCBI nr
Match: gi|778669595|ref|XP_011649275.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 193.7 bits (491), Expect = 1.5e-46
Identity = 93/97 (95.88%), Postives = 94/97 (96.91%), Query Frame = 1


Query: 1  MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVN 60
          MGIR PSVLLSAKQILKMK+VS RCQSDVPKGHIPVYVGENQRKRF VPISYLNHPSFVN
Sbjct: 1  MGIRFPSVLLSAKQILKMKSVSIRCQSDVPKGHIPVYVGENQRKRFFVPISYLNHPSFVN 60

Query: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 98
          LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS
Sbjct: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 97

[Close]

BLAST of CSPI02G12960 vs. NCBI nr
Match: gi|449458550|ref|XP_004147010.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 170.6 bits (431), Expect = 1.3e-39
Identity = 80/97 (82.47%), Postives = 88/97 (90.72%), Query Frame = 1


Query: 1  MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVN 60
          MG RLPS+L SAKQILK +++S RCQS VPKGHI VYVGE Q+KRFLVPISYLNHPSF++
Sbjct: 1  MGFRLPSILFSAKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLD 60

Query: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 98
          LL RAEEEFGF+HPTGGLTIPCKEEAFIDVTSRLH S
Sbjct: 61 LLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLHTS 97

[Close]

BLAST of CSPI02G12960 vs. NCBI nr
Match: gi|659115590|ref|XP_008457631.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 168.3 bits (425), Expect = 6.6e-39
Identity = 79/97 (81.44%), Postives = 87/97 (89.69%), Query Frame = 1


Query: 1  MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVN 60
          MG RLPS+L SAKQILK +++S RCQS VPKGHI VYVGE Q+ RFLVPISYLNHPSF++
Sbjct: 1  MGFRLPSILFSAKQILKAQSISGRCQSSVPKGHIAVYVGEVQKTRFLVPISYLNHPSFLD 60

Query: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 98
          LL RAEEEFGF+HPTGGLTIPCKEEAFIDVTSRLH S
Sbjct: 61 LLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRLHTS 97

The following BLAST results are available for this feature:

BLAST of CSPI02G12960 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU24_ARATH	7.1e-25	65.12	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU23_ARATH	7.1e-25	63.22	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1	[more]
SAU20_ARATH	9.3e-25	65.88	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
SAU22_ARATH	1.6e-24	62.79	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]
SAU19_ARATH	2.1e-24	63.95	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1	[more]

BLAST of CSPI02G12960 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LM65_CUCSA	8.4e-49	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258730 PE=4 SV=1	[more]
A0A0A0LLF7_CUCSA	1.0e-46	95.88	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258750 PE=4 SV=1	[more]
A0A0A0LIZ4_CUCSA	9.3e-40	82.47	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258710 PE=4 SV=1	[more]
A0A0A0LPH3_CUCSA	5.1e-38	74.23	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1	[more]
A0A0A0LJ92_CUCSA	1.1e-37	80.41	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258690 PE=4 SV=1	[more]

BLAST of CSPI02G12960 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38840.1	2.5e-28	58.59	SAUR-like auxin-responsive protein family	[more]
AT5G18060.1	4.0e-26	63.22	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	4.0e-26	65.12	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	5.2e-26	65.88	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	5.2e-26	54.81	SAUR-like auxin-responsive protein family	[more]

BLAST of CSPI02G12960 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778669591\|ref\|XP_011649272.1\|	1.2e-48	100.00	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|659115594\|ref\|XP_008457634.1\|	4.6e-48	98.97	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|778669595\|ref\|XP_011649275.1\|	1.5e-46	95.88	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|449458550\|ref\|XP_004147010.1\|	1.3e-39	82.47	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|659115590\|ref\|XP_008457631.1\|	6.6e-39	81.44	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G12960.1	CSPI02G12960.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 13..93 score: 5.3
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 2..97 score: 1.6
None	No IPR available	PANTHER	PTHR31929:SF3	SUBFAMILY NOT NAMED	coord: 2..97 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI02G12960	Cucurbita maxima (Rimu)	cmacpiB441
CSPI02G12960	Cucurbita maxima (Rimu)	cmacpiB547
CSPI02G12960	Cucurbita maxima (Rimu)	cmacpiB593
CSPI02G12960	Cucurbita moschata (Rifu)	cmocpiB429
CSPI02G12960	Cucurbita moschata (Rifu)	cmocpiB500
CSPI02G12960	Cucurbita moschata (Rifu)	cmocpiB536
CSPI02G12960	Cucurbita moschata (Rifu)	cmocpiB582
CSPI02G12960	Cucumber (Chinese Long) v2	cpicuB065
CSPI02G12960	Cucumber (Chinese Long) v2	cpicuB094
CSPI02G12960	Melon (DHL92) v3.5.1	cpimeB097
CSPI02G12960	Melon (DHL92) v3.5.1	cpimeB102
CSPI02G12960	Melon (DHL92) v3.5.1	cpimeB123
CSPI02G12960	Watermelon (Charleston Gray)	cpiwcgB111
CSPI02G12960	Watermelon (Charleston Gray)	cpiwcgB131
CSPI02G12960	Watermelon (97103) v1	cpiwmB150
CSPI02G12960	Watermelon (97103) v1	cpiwmB157
CSPI02G12960	Cucurbita pepo (Zucchini)	cpecpiB269
CSPI02G12960	Cucurbita pepo (Zucchini)	cpecpiB542
CSPI02G12960	Cucurbita pepo (Zucchini)	cpecpiB668
CSPI02G12960	Cucurbita pepo (Zucchini)	cpecpiB706
CSPI02G12960	Bottle gourd (USVL1VR-Ls)	cpilsiB091
CSPI02G12960	Melon (DHL92) v3.6.1	cpimedB087
CSPI02G12960	Melon (DHL92) v3.6.1	cpimedB089
CSPI02G12960	Cucumber (Gy14) v2	cgybcpiB056
CSPI02G12960	Cucumber (Gy14) v2	cgybcpiB062
CSPI02G12960	Cucumber (Gy14) v2	cgybcpiB303
CSPI02G12960	Silver-seed gourd	carcpiB0347
CSPI02G12960	Cucumber (Chinese Long) v3	cpicucB080
CSPI02G12960	Watermelon (97103) v2	cpiwmbB112
CSPI02G12960	Wax gourd	cpiwgoB181
CSPI02G12960	Wild cucumber (PI 183967)	cpicpiB089
CSPI02G12960	Cucumber (Gy14) v1	cgycpiB265