CSPI02G08930.1 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAATAATTTATGGATTAATTTTAAGTGGATGAGTGTTTTAAGAAAATTGGAAGAAGTTAAGTGGATAGTTGATGAATTTTGGAGAGAAAGAAAGGGAAATGAATTAAGAAGCAGAAAAAGAAAGGATGTGTAATGAAAGATTGGAAGAATTATAGGAAGAGAAAAGGAGAAGTATGAGATTAGAAAGGGTAAAGGGGAGGGTGGCGTTGGCGTGATTTAGAAGTAAATGAGTTATAATGGAAATTAAGTAAGGATGAGAAATTGGATTTAATGAAAAAAAAGAAAGAGAGAGAGAAGAAAAGGGAAGGAAAAAGAGGGAAGGGGCTCGGAACCTTGAAAGACAGAGAGAGAGAGAGTGTTCGTTGTGTTTCCAAAACCAGCAAGTTGCATCTTTCCTAAAAGCCCCCACCTTCCCTCTTTCTAATCAAAATTCACTGAACCCAAATCCCCATCTTCCTTCTCTCTCTCTCTCTCTCTTAACGTTTCAGTAAAATTAAAAATCCATATAACAAGACCCCATCAAATCAATATTCATCCCCCTCTTCCTCTCTTCCAATTCACCGCCTCTCTCATCATCATCATCATCATATCATTCCATAAATTCCCCCATTTCTCCTCTTCCCCTTTTCTGATTTCACTTTATTTATTTCTTCCATCTCACCTTCTAGATCCATTTTTCATCCTATACCCTATTCTACTCTTTTCGGCCATATATCTCATCTCTCATGCACCTCCTTCTGGATCTTTTCATTCTTTGATTTTGTATCTTTTTCATTTAGATGACTCTTGGATTCCAAGAAGCTGAGAAAAGGGGTGTTCCCAATCCCAACCATTTTCTTCATTTGCACCAACCCTCTCAAAATCATTACTATTCCATGGATGGATCCTCCAATAATTCCAATTTCGGTTCCGATTCCACCAATAGGATTACGTATTACGCCGCCGCAGCACAAGACCGGCGTAAGGTTGAGTATTTGCGATCTCTATCCCAGGGGACACCACGTCGATTGGTGCCGGCCGCGAGCTATTTAGGGGTTCTGCTCTGTTTGGCGGCGTCTTTGTTGATTCTTCCGTTGGTTCTACCGCCGCTGCCGCCGCCGCCTTTGATGCTGCTGCTGCTTCTTCCGATTGGGATTTTGGGAATGCTAATGGTGTTAGCGTTTATGCCTTCTAATGACACCAAGGATATAACCTCTTCCTCTCATACATATATGTAATGTAAATGTTCAATCATCTTTTTCTTTTTTTTTTTTCTTTTTGGGAAAATTTTGTATGTTCTTTAATTTCTCTTTGCACATCAACAAAAGAAGGGGAAAAAAAAAGGGAGAGATTGAAAATCGGTTCTTTGATTACTCGAAAAAGTTTAATTTGTTAGATTTAATAATGATGATGTGATGAATCTGGCTGCTTCGAATTTTTTATTTACCATTCTTTTATTATTTCTGTTCTTGTGTATCTATACATTGCATTTTCTCACGTTTCAATTCTCTATGATAATGATCTTAATTACTGTGGGTCCTTTCATTTTATGTCTG ATGACTCTTGGATTCCAAGAAGCTGAGAAAAGGGGTGTTCCCAATCCCAACCATTTTCTTCATTTGCACCAACCCTCTCAAAATCATTACTATTCCATGGATGGATCCTCCAATAATTCCAATTTCGGTTCCGATTCCACCAATAGGATTACGTATTACGCCGCCGCAGCACAAGACCGGCGTAAGGTTGAGTATTTGCGATCTCTATCCCAGGGGACACCACGTCGATTGGTGCCGGCCGCGAGCTATTTAGGGGTTCTGCTCTGTTTGGCGGCGTCTTTGTTGATTCTTCCGTTGGTTCTACCGCCGCTGCCGCCGCCGCCTTTGATGCTGCTGCTGCTTCTTCCGATTGGGATTTTGGGAATGCTAATGGTGTTAGCGTTTATGCCTTCTAATGACACCAAGGATATAACCTCTTCCTCTCATACATATATGTAA ATGACTCTTGGATTCCAAGAAGCTGAGAAAAGGGGTGTTCCCAATCCCAACCATTTTCTTCATTTGCACCAACCCTCTCAAAATCATTACTATTCCATGGATGGATCCTCCAATAATTCCAATTTCGGTTCCGATTCCACCAATAGGATTACGTATTACGCCGCCGCAGCACAAGACCGGCGTAAGGTTGAGTATTTGCGATCTCTATCCCAGGGGACACCACGTCGATTGGTGCCGGCCGCGAGCTATTTAGGGGTTCTGCTCTGTTTGGCGGCGTCTTTGTTGATTCTTCCGTTGGTTCTACCGCCGCTGCCGCCGCCGCCTTTGATGCTGCTGCTGCTTCTTCCGATTGGGATTTTGGGAATGCTAATGGTGTTAGCGTTTATGCCTTCTAATGACACCAAGGATATAACCTCTTCCTCTCATACATATATGTAA
BLAST of CSPI02G08930.1 vs. Swiss-Prot
Match: ARL_ARATH (ARGOS-like protein OS=Arabidopsis thaliana GN=ARL PE=2 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 1.4e-13 Identity = 62/126 (49.21%), Postives = 84/126 (66.67%), Query Frame = 1
BLAST of CSPI02G08930.1 vs. Swiss-Prot
Match: ARGOS_ARATH (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Arabidopsis thaliana GN=ARGOS PE=2 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 2.1e-09 Identity = 52/116 (44.83%), Postives = 69/116 (59.48%), Query Frame = 1
BLAST of CSPI02G08930.1 vs. Swiss-Prot
Match: ARGOS_BRARP (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Brassica rapa subsp. pekinensis GN=ARGOS PE=2 SV=2) HSP 1 Score: 58.2 bits (139), Expect = 9.0e-08 Identity = 56/136 (41.18%), Postives = 78/136 (57.35%), Query Frame = 1
BLAST of CSPI02G08930.1 vs. TrEMBL
Match: A0A0A0LHQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G123610 PE=4 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 2.3e-71 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 1
BLAST of CSPI02G08930.1 vs. TrEMBL
Match: A0A061ERG1_THECC (Auxin-regulated gene involved in organ size OS=Theobroma cacao GN=TCM_021527 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 2.4e-15 Identity = 59/91 (64.84%), Postives = 71/91 (78.02%), Query Frame = 1
BLAST of CSPI02G08930.1 vs. TrEMBL
Match: B9HGA4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s00290g PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 2.0e-14 Identity = 57/84 (67.86%), Postives = 68/84 (80.95%), Query Frame = 1
BLAST of CSPI02G08930.1 vs. TrEMBL
Match: A0A067K392_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19251 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 3.4e-14 Identity = 57/92 (61.96%), Postives = 75/92 (81.52%), Query Frame = 1
BLAST of CSPI02G08930.1 vs. TrEMBL
Match: V4VQI9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022861mg PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 5.9e-14 Identity = 56/86 (65.12%), Postives = 68/86 (79.07%), Query Frame = 1
BLAST of CSPI02G08930.1 vs. TAIR10
Match: AT2G44080.1 (AT2G44080.1 ARGOS-like) HSP 1 Score: 77.4 bits (189), Expect = 8.1e-15 Identity = 62/126 (49.21%), Postives = 84/126 (66.67%), Query Frame = 1
BLAST of CSPI02G08930.1 vs. TAIR10
Match: AT3G59900.1 (AT3G59900.1 auxin-regulated gene involved in organ size) HSP 1 Score: 63.5 bits (153), Expect = 1.2e-10 Identity = 52/116 (44.83%), Postives = 69/116 (59.48%), Query Frame = 1
BLAST of CSPI02G08930.1 vs. NCBI nr
Match: gi|700206331|gb|KGN61450.1| (hypothetical protein Csa_2G123610 [Cucumis sativus]) HSP 1 Score: 276.2 bits (705), Expect = 3.4e-71 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 1
BLAST of CSPI02G08930.1 vs. NCBI nr
Match: gi|659082120|ref|XP_008441681.1| (PREDICTED: ARGOS-like protein [Cucumis melo]) HSP 1 Score: 260.4 bits (664), Expect = 1.9e-66 Identity = 138/145 (95.17%), Postives = 141/145 (97.24%), Query Frame = 1
BLAST of CSPI02G08930.1 vs. NCBI nr
Match: gi|590627539|ref|XP_007026465.1| (Auxin-regulated gene involved in organ size [Theobroma cacao]) HSP 1 Score: 90.1 bits (222), Expect = 3.4e-15 Identity = 59/91 (64.84%), Postives = 71/91 (78.02%), Query Frame = 1
BLAST of CSPI02G08930.1 vs. NCBI nr
Match: gi|224095294|ref|XP_002310372.1| (hypothetical protein POPTR_0007s00290g [Populus trichocarpa]) HSP 1 Score: 87.0 bits (214), Expect = 2.9e-14 Identity = 57/84 (67.86%), Postives = 68/84 (80.95%), Query Frame = 1
BLAST of CSPI02G08930.1 vs. NCBI nr
Match: gi|802677453|ref|XP_012081940.1| (PREDICTED: ARGOS-like protein [Jatropha curcas]) HSP 1 Score: 86.3 bits (212), Expect = 4.9e-14 Identity = 57/92 (61.96%), Postives = 75/92 (81.52%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
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