CSPI02G02280.1 (mRNA) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI02G02280.1
Type	mRNA
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	At4g02040
Location	Chr2 : 1557960 .. 1558571 (-)
Sequence length	612

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACCGTGATTCTTCCGCCACAGGACTGCCTTGGGAAAGGCTTACGCCACCAAGGATTGGTGCTATCAGCACCGTTGAGTTCTCGGCGAAATTCTAACCCTAATAGTACTAGTACTTCTTCAAACCCTAACTTGAATCATGATGCTAGGAGTTGTTCAGGCAGACGGAGGAGGAGTGCATCGGTGGGATTGAAGGCTAACCGTCAAGCTAACAGAGAGCGGAGCCGGGTGAGGGAGTCATCTACTACGGCGAAGATGGCAACGAGGAGTTTGGTTATGGGACAGGTTAAGATCCTGAAGCGTGGAGAAATATTGACTCCTGATCGAGGAGTTGGTGCTGGTGGTGATGATTCTTGTGGTAAGAGGAGATTAGAATCGAAAGGTGAGGAGGTGGATTTGGTTTTGGGATCTACTGATCGGTTGGGTCCAGACGCTGATTTGATGCAGAAGCAGGTTGTGTTAACGGACTTCAAGGATGGTATGTATGCTGGATCGGGTGCGTTCTTCGCTTCGCCGCCTCCGAGTTCGGTGCCCTTGCCGTCTTTTGCAGTTAAGAACGGGATTGCAACAACCGATCTTAGGCGGTTGCTACGACTTGATTTAGAATGA

mRNA sequence

ATGGCAACCGTGATTCTTCCGCCACAGGACTGCCTTGGGAAAGGCTTACGCCACCAAGGATTGGTGCTATCAGCACCGTTGAGTTCTCGGCGAAATTCTAACCCTAATAGTACTAGTACTTCTTCAAACCCTAACTTGAATCATGATGCTAGGAGTTGTTCAGGCAGACGGAGGAGGAGTGCATCGGTGGGATTGAAGGCTAACCGTCAAGCTAACAGAGAGCGGAGCCGGGTGAGGGAGTCATCTACTACGGCGAAGATGGCAACGAGGAGTTTGGTTATGGGACAGGTTAAGATCCTGAAGCGTGGAGAAATATTGACTCCTGATCGAGGAGTTGGTGCTGGTGGTGATGATTCTTGTGGTAAGAGGAGATTAGAATCGAAAGGTGAGGAGGTGGATTTGGTTTTGGGATCTACTGATCGGTTGGGTCCAGACGCTGATTTGATGCAGAAGCAGGTTGTGTTAACGGACTTCAAGGATGGTATGTATGCTGGATCGGGTGCGTTCTTCGCTTCGCCGCCTCCGAGTTCGGTGCCCTTGCCGTCTTTTGCAGTTAAGAACGGGATTGCAACAACCGATCTTAGGCGGTTGCTACGACTTGATTTAGAATGA

Coding sequence (CDS)

ATGGCAACCGTGATTCTTCCGCCACAGGACTGCCTTGGGAAAGGCTTACGCCACCAAGGATTGGTGCTATCAGCACCGTTGAGTTCTCGGCGAAATTCTAACCCTAATAGTACTAGTACTTCTTCAAACCCTAACTTGAATCATGATGCTAGGAGTTGTTCAGGCAGACGGAGGAGGAGTGCATCGGTGGGATTGAAGGCTAACCGTCAAGCTAACAGAGAGCGGAGCCGGGTGAGGGAGTCATCTACTACGGCGAAGATGGCAACGAGGAGTTTGGTTATGGGACAGGTTAAGATCCTGAAGCGTGGAGAAATATTGACTCCTGATCGAGGAGTTGGTGCTGGTGGTGATGATTCTTGTGGTAAGAGGAGATTAGAATCGAAAGGTGAGGAGGTGGATTTGGTTTTGGGATCTACTGATCGGTTGGGTCCAGACGCTGATTTGATGCAGAAGCAGGTTGTGTTAACGGACTTCAAGGATGGTATGTATGCTGGATCGGGTGCGTTCTTCGCTTCGCCGCCTCCGAGTTCGGTGCCCTTGCCGTCTTTTGCAGTTAAGAACGGGATTGCAACAACCGATCTTAGGCGGTTGCTACGACTTGATTTAGAATGA

Homology

[Close]

BLAST of CSPI02G02280.1 vs. TrEMBL
Match: A0A0A0LG41_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G008780 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 7.7e-105
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 1


Query: 1   MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNSNPNSTSTSSNPNLNHDARSCSGRRRRS 60
           MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNSNPNSTSTSSNPNLNHDARSCSGRRRRS
Sbjct: 1   MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNSNPNSTSTSSNPNLNHDARSCSGRRRRS 60

Query: 61  ASVGLKANRQANRERSRVRESSTTAKMATRSLVMGQVKILKRGEILTPDRGVGAGGDDSC 120
           ASVGLKANRQANRERSRVRESSTTAKMATRSLVMGQVKILKRGEILTPDRGVGAGGDDSC
Sbjct: 61  ASVGLKANRQANRERSRVRESSTTAKMATRSLVMGQVKILKRGEILTPDRGVGAGGDDSC 120

Query: 121 GKRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDFKDGMYAGSGAFFASPPPSSVPL 180
           GKRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDFKDGMYAGSGAFFASPPPSSVPL
Sbjct: 121 GKRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDFKDGMYAGSGAFFASPPPSSVPL 180

Query: 181 PSFAVKNGIATTDLRRLLRLDLE 204
           PSFAVKNGIATTDLRRLLRLDLE
Sbjct: 181 PSFAVKNGIATTDLRRLLRLDLE 203

[Close]

BLAST of CSPI02G02280.1 vs. TrEMBL
Match: M5VR81_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009094mg PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 9.6e-39
Identity = 104/207 (50.24%), Postives = 141/207 (68.12%), Query Frame = 1


Query: 1   MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNSNPNSTSTSSNPNLNHDARSCSGRRRRS 60
           M T IL  QDCL    RH+ L L+    SRR+ N ++ + + +PN   +A     RRR+ 
Sbjct: 102 MGTAILRSQDCLRGRFRHEALTLTPRSGSRRSPNFSNPNPNPSPNYGSNANLHQSRRRKR 161

Query: 61  ASVGLKANRQANRERSRVRESSTTAKMATRSLVMGQVKILKRGEILTPD---RGVGAGGD 120
           + +G ++N Q +R R R  + +  AK+  ++LVMGQVKIL+RGE L+P+   RG+G    
Sbjct: 162 SPMGFQSN-QHDRARDRYSDRAMVAKVPAKNLVMGQVKILRRGEALSPEKNNRGLGVVSG 221

Query: 121 DSCGKRRLESKGEEV-DLVLGSTDRLGPDADLMQKQVVLTDFK--DGMYAGSGAFFASPP 180
           D+ GK R  +K E+V DLVLGSTDRLGPD + +QKQ+ + +FK  D +YAGS AF+ASPP
Sbjct: 222 DA-GKPR--AKSEDVPDLVLGSTDRLGPDPETVQKQIKVAEFKVMDAIYAGSSAFYASPP 281

Query: 181 PSSVPLPSFAVKNGIATTDLRRLLRLD 202
           PSSVPLP+F  +NG AT+DLRRLLRLD
Sbjct: 282 PSSVPLPAFLGRNGTATSDLRRLLRLD 304

[Close]

BLAST of CSPI02G02280.1 vs. TrEMBL
Match: W9S2D6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011949 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.4e-34
Identity = 103/213 (48.36%), Postives = 130/213 (61.03%), Query Frame = 1


Query: 1   MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNSN-PNSTSTSSNPNLNHDARSCSGRRRR 60
           MA  +L  QDC G     + L L+AP  SRR  N P  +  SS+P           RRR+
Sbjct: 1   MAMAVLRSQDCRGGRFGDESLKLTAPFRSRRKPNFPILSPNSSDPQ---------SRRRK 60

Query: 61  SASVGLKANRQANRERSRVRESSTTAKMATRSLVMGQVKILKRGEILT-----PDRGVGA 120
            + VG +++ Q +R+ SR R  +   K    +LVMGQVKILKRGE L+      +RGVG 
Sbjct: 61  RSPVGFQSSPQ-DRDPSRSRYGALVEKAPANNLVMGQVKILKRGETLSLSPARNNRGVGV 120

Query: 121 GGDDSCGKRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDFK-----DGMYAGSGAF 180
              +S  K   +  G   DLVLGSTDRLGPD + ++KQV +++ K     DG+YAGSGAF
Sbjct: 121 VAGESNRKSTAKKVGAGADLVLGSTDRLGPDPETVKKQVRVSNHKVVASADGLYAGSGAF 180

Query: 181 FASPPPSSVPLPSFAVKNGIATTDLRRLLRLDL 203
           F SPPPSSVPLP+F  KN  ATTDLRRLL+LDL
Sbjct: 181 FPSPPPSSVPLPAFLGKNDAATTDLRRLLQLDL 203

[Close]

BLAST of CSPI02G02280.1 vs. TrEMBL
Match: I3SSQ3_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 6.9e-29
Identity = 98/207 (47.34%), Postives = 122/207 (58.94%), Query Frame = 1


Query: 1   MATVILPPQDCLGKG-LRHQGLVL-SAPLSSRRNSNPNSTSTSSNPNLNHDARSCSGRRR 60
           M T IL   DCL +  L +  L + S+ + SR+NSNPN    S   N NH  R    RR+
Sbjct: 1   MGTAILRSHDCLQRRFLPNDALSIPSSQIRSRKNSNPNPNCKSYVNNNNHHNR----RRK 60

Query: 61  RSASVGLKANRQANRERSRVRESSTTAKMATRSLVMGQVKILKRGEILTPDRGVGAGGDD 120
           RS     ++N+         R+ S    +A   LVMGQVKILKRGE L+P+  V    D 
Sbjct: 61  RSPVTAGQSNQHD-------RKQSVDRTVAPTKLVMGQVKILKRGEKLSPEIVVPVAEDQ 120

Query: 121 SCGKRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDF--KDGMYAGSGAFFASPPPS 180
                      + +DLVLGSTDR GPD   MQKQ+ ++D   KD +YAGSG F +SPPPS
Sbjct: 121 KV------KAAKAMDLVLGSTDRFGPDPITMQKQIRVSDSVSKDVIYAGSG-FVSSPPPS 180

Query: 181 SVPLPSFAVKNGIATTDLRRLLRLDLE 204
           SVP+P F  KNG+AT+DLRRLLRLDLE
Sbjct: 181 SVPVPGFLGKNGVATSDLRRLLRLDLE 189

[Close]

BLAST of CSPI02G02280.1 vs. TrEMBL
Match: I3SNI4_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_4g116830 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.6e-28
Identity = 98/207 (47.34%), Postives = 122/207 (58.94%), Query Frame = 1


Query: 1   MATVILPPQDCLGKG-LRHQGLVL-SAPLSSRRNSNPNSTSTSSNPNLNHDARSCSGRRR 60
           M T IL   DCL +  L +  L + S+ + SR+NSNPN    S   N NH  R    RR+
Sbjct: 1   MGTAILRSHDCLQRRFLPNDALSIPSSQIRSRKNSNPNPNCKSYVNNNNHHNR----RRK 60

Query: 61  RSASVGLKANRQANRERSRVRESSTTAKMATRSLVMGQVKILKRGEILTPDRGVGAGGDD 120
           RS     ++N+         R+ S    +A   LVMGQVKILKRGE L+P+  V    D 
Sbjct: 61  RSPVTTGQSNQHD-------RKQSVDRTVAPTKLVMGQVKILKRGEKLSPEIVVPVAEDQ 120

Query: 121 SCGKRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDF--KDGMYAGSGAFFASPPPS 180
                      + +DLVLGSTDR GPD   MQKQ+ ++D   KD +YAGSG F +SPPPS
Sbjct: 121 KV------KAVKAMDLVLGSTDRFGPDPITMQKQIRVSDSVSKDVIYAGSG-FVSSPPPS 180

Query: 181 SVPLPSFAVKNGIATTDLRRLLRLDLE 204
           SVP+P F  KNG+AT+DLRRLLRLDLE
Sbjct: 181 SVPVPGFLGKNGVATSDLRRLLRLDLE 189

[Close]

BLAST of CSPI02G02280.1 vs. TAIR10
Match: AT4G02040.1 (AT4G02040.1 unknown protein)

HSP 1 Score: 58.5 bits (140), Expect = 5.4e-09
Identity = 44/126 (34.92%), Postives = 70/126 (55.56%), Query Frame = 1


Query: 69  RQANRERSRVRESSTTAKM--ATRSLVMGQVKILKRGEILTP--DRGVGAGGDDSCGKRR 128
           R ++    R ++S T  K   A  +LVM QVKILKRGE L+           DD+  +R 
Sbjct: 30  RNSSTAPRRRKQSPTVVKSPAANPNLVMEQVKILKRGETLSAFNKNKENISSDDT--RRP 89

Query: 129 LESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDFKDGMYAGSGAFFASPPPSSVPLPSF- 188
           +    ++VDL++ +T+R+GP+ +++ KQ+     +   +AG+     SPPPS VP+P F 
Sbjct: 90  VLKMIKDVDLIVSATNRIGPEPEILMKQIGALGLQS--FAGANCSL-SPPPSCVPIPCFL 149

Query: 189 AVKNGI 190
             KN +
Sbjct: 150 GTKNNL 150

[Close]

BLAST of CSPI02G02280.1 vs. TAIR10
Match: AT4G32020.1 (AT4G32020.1 unknown protein)

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-08
Identity = 67/214 (31.31%), Postives = 89/214 (41.59%), Query Frame = 1


Query: 1   MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNSNPNSTSTSSNPNL-NHDARSCSGRRRR 60
           M   +L PQDCL     H           +++ NP++        + N+  R    R + 
Sbjct: 1   MGVAVLNPQDCLKDPFSHM----------KQHRNPSACPNRQKKTVSNNRTRRSPPRSQS 60

Query: 61  SASVGLKANRQANRERSRVRE---SSTTAKMATRSLVMGQVKILKRGEILTPDRGVGAGG 120
           S S            R+ V       T  K  + ++ + QV+ILKRGE            
Sbjct: 61  SRSSSPPVAPPLPPPRAAVSAFVPKGTLKKSLSNTVAVSQVRILKRGE------------ 120

Query: 121 DDSCGKRRLESKGEEVDLV-----LGSTDRLGPDADLMQKQVVLTDFKDG---MYAGSGA 180
                    E   E  DLV     LGST R+GPD  L+  Q+ L+  K      YAG   
Sbjct: 121 ---------EIPKETSDLVVEMSDLGSTRRIGPDPGLIPGQIRLSGRKSKSAPFYAGP-V 180

Query: 181 FFASPPPSSVPLPSFAVKNGIATTDLRRLLRLDL 203
              SPPPS VPLP+F  K   AT DL R+LRLD+
Sbjct: 181 TMTSPPPSDVPLPAFFTKK--ATNDLIRILRLDI 180

[Close]

BLAST of CSPI02G02280.1 vs. NCBI nr
Match: gi|778666298|ref|XP_011648719.1| (PREDICTED: uncharacterized protein LOC105434545 [Cucumis sativus])

HSP 1 Score: 387.9 bits (995), Expect = 1.1e-104
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 1


Query: 1   MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNSNPNSTSTSSNPNLNHDARSCSGRRRRS 60
           MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNSNPNSTSTSSNPNLNHDARSCSGRRRRS
Sbjct: 1   MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNSNPNSTSTSSNPNLNHDARSCSGRRRRS 60

Query: 61  ASVGLKANRQANRERSRVRESSTTAKMATRSLVMGQVKILKRGEILTPDRGVGAGGDDSC 120
           ASVGLKANRQANRERSRVRESSTTAKMATRSLVMGQVKILKRGEILTPDRGVGAGGDDSC
Sbjct: 61  ASVGLKANRQANRERSRVRESSTTAKMATRSLVMGQVKILKRGEILTPDRGVGAGGDDSC 120

Query: 121 GKRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDFKDGMYAGSGAFFASPPPSSVPL 180
           GKRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDFKDGMYAGSGAFFASPPPSSVPL
Sbjct: 121 GKRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDFKDGMYAGSGAFFASPPPSSVPL 180

Query: 181 PSFAVKNGIATTDLRRLLRLDLE 204
           PSFAVKNGIATTDLRRLLRLDLE
Sbjct: 181 PSFAVKNGIATTDLRRLLRLDLE 203

[Close]

BLAST of CSPI02G02280.1 vs. NCBI nr
Match: gi|659070816|ref|XP_008456814.1| (PREDICTED: uncharacterized protein LOC103496651 [Cucumis melo])

HSP 1 Score: 356.7 bits (914), Expect = 2.7e-95
Identity = 189/205 (92.20%), Postives = 193/205 (94.15%), Query Frame = 1


Query: 1   MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNSNPNSTSTSSNPNLNHDARSCSGRRRRS 60
           MATVILPPQDCLGKGLRHQGLVLSAPL+SRRNSNPNS STSSNPN NHD +SCSGRRRRS
Sbjct: 1   MATVILPPQDCLGKGLRHQGLVLSAPLNSRRNSNPNSASTSSNPNFNHDDKSCSGRRRRS 60

Query: 61  ASVGLKANRQANRERSRVRESSTTAKMATRSLVMGQVKILKRGEILTPDRGV--GAGGDD 120
           ASVGLKANRQANRERSRVRESSTTAKM T+SLVMGQVKILKRGEILTP RGV  G GG D
Sbjct: 61  ASVGLKANRQANRERSRVRESSTTAKMTTKSLVMGQVKILKRGEILTPGRGVGGGGGGGD 120

Query: 121 SCGKRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDFKDGMYAGSGAFFASPPPSSV 180
           SCGKRRLESK EEVDLVLGSTDRLGPD DLMQKQVVLT+FKDGMYAGSGAFFASPPPSSV
Sbjct: 121 SCGKRRLESKVEEVDLVLGSTDRLGPDPDLMQKQVVLTEFKDGMYAGSGAFFASPPPSSV 180

Query: 181 PLPSFAVKNGIATTDLRRLLRLDLE 204
           PLPSF VKNGIATTDLRRLLRLDLE
Sbjct: 181 PLPSFVVKNGIATTDLRRLLRLDLE 205

[Close]

BLAST of CSPI02G02280.1 vs. NCBI nr
Match: gi|645275588|ref|XP_008242890.1| (PREDICTED: uncharacterized protein LOC103341189 [Prunus mume])

HSP 1 Score: 169.5 bits (428), Expect = 6.2e-39
Identity = 105/207 (50.72%), Postives = 142/207 (68.60%), Query Frame = 1


Query: 1   MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNSNPNSTSTSSNPNLNHDARSCSGRRRRS 60
           M T IL  QDCL   LRH+ L L+    SRR+ N ++ + + +PN   +A     RRR+ 
Sbjct: 1   MGTAILRSQDCLRGRLRHEALTLTPRSGSRRSPNFSNPNPNHSPNYGSNANLHQSRRRKR 60

Query: 61  ASVGLKANRQANRERSRVRESSTTAKMATRSLVMGQVKILKRGEILTPD---RGVGAGGD 120
           + +G ++N Q +R R R  + +  AK+  ++LVMGQVKIL+RGE L+P+   RG+G    
Sbjct: 61  SPMGFQSN-QHDRGRDRYSDRAMVAKVPAKNLVMGQVKILRRGEALSPEKNNRGLGVVSG 120

Query: 121 DSCGKRRLESKGEEV-DLVLGSTDRLGPDADLMQKQVVLTDFK--DGMYAGSGAFFASPP 180
           D+ GK R  +K E+V DLVLGSTDRLGPD + +QKQ+ + +FK  D +YAGS AF+ASPP
Sbjct: 121 DA-GKPR--AKSEDVPDLVLGSTDRLGPDPETVQKQIKVAEFKVMDAIYAGSSAFYASPP 180

Query: 181 PSSVPLPSFAVKNGIATTDLRRLLRLD 202
           PSSVPLP+F  +NG AT+DLRRLLRLD
Sbjct: 181 PSSVPLPAFLGRNGTATSDLRRLLRLD 203

[Close]

BLAST of CSPI02G02280.1 vs. NCBI nr
Match: gi|595805386|ref|XP_007202287.1| (hypothetical protein PRUPE_ppa009094mg [Prunus persica])

HSP 1 Score: 168.3 bits (425), Expect = 1.4e-38
Identity = 104/207 (50.24%), Postives = 141/207 (68.12%), Query Frame = 1


Query: 1   MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNSNPNSTSTSSNPNLNHDARSCSGRRRRS 60
           M T IL  QDCL    RH+ L L+    SRR+ N ++ + + +PN   +A     RRR+ 
Sbjct: 102 MGTAILRSQDCLRGRFRHEALTLTPRSGSRRSPNFSNPNPNPSPNYGSNANLHQSRRRKR 161

Query: 61  ASVGLKANRQANRERSRVRESSTTAKMATRSLVMGQVKILKRGEILTPD---RGVGAGGD 120
           + +G ++N Q +R R R  + +  AK+  ++LVMGQVKIL+RGE L+P+   RG+G    
Sbjct: 162 SPMGFQSN-QHDRARDRYSDRAMVAKVPAKNLVMGQVKILRRGEALSPEKNNRGLGVVSG 221

Query: 121 DSCGKRRLESKGEEV-DLVLGSTDRLGPDADLMQKQVVLTDFK--DGMYAGSGAFFASPP 180
           D+ GK R  +K E+V DLVLGSTDRLGPD + +QKQ+ + +FK  D +YAGS AF+ASPP
Sbjct: 222 DA-GKPR--AKSEDVPDLVLGSTDRLGPDPETVQKQIKVAEFKVMDAIYAGSSAFYASPP 281

Query: 181 PSSVPLPSFAVKNGIATTDLRRLLRLD 202
           PSSVPLP+F  +NG AT+DLRRLLRLD
Sbjct: 282 PSSVPLPAFLGRNGTATSDLRRLLRLD 304

[Close]

BLAST of CSPI02G02280.1 vs. NCBI nr
Match: gi|694421156|ref|XP_009338438.1| (PREDICTED: uncharacterized protein LOC103930788 [Pyrus x bretschneideri])

HSP 1 Score: 165.6 bits (418), Expect = 8.9e-38
Identity = 106/209 (50.72%), Postives = 138/209 (66.03%), Query Frame = 1


Query: 1   MATVILPPQDCLGKGLRHQGLVLS-APLS-SRRNSNPNSTSTSSNPNLNHDARSCSGRRR 60
           M T IL  QDCL    RH+ L L+ +P S SRR+SN ++ + +S PN    A     RRR
Sbjct: 1   MRTAILRSQDCLRGRFRHEALTLTLSPRSGSRRSSNFSNPNPNSTPNHGSTANIHQSRRR 60

Query: 61  RSASVGLKANRQANRERSRVRESSTTAKMATRSLVMGQVKILKRGEILTPD---RGVGAG 120
           + + +GL++N Q  R R R  + +  AK   ++LV+GQVKIL+RGE L P+   RG+G  
Sbjct: 61  KRSPMGLQSN-QHERPRDRCSDRAAVAKAPGKNLVIGQVKILRRGEDLNPEKNNRGLGVV 120

Query: 121 GDDSCGKRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDFK--DGMYAGSGAFFASP 180
             D   ++    K  + DLVLGSTDRLGPD + +QKQ+   +FK  DG+YAGS AF+ASP
Sbjct: 121 AHDD--RKPKAKKENDPDLVLGSTDRLGPDPETVQKQIKAAEFKVMDGIYAGSSAFYASP 180

Query: 181 PPSSVPLPSFAVKNGIATTDLRRLLRLDL 203
           PPSSVPLPSF  +NG AT+DLRRLLRLDL
Sbjct: 181 PPSSVPLPSFLGRNGPATSDLRRLLRLDL 206

The following BLAST results are available for this feature:

BLAST of CSPI02G02280.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI02G02280.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LG41_CUCSA	7.7e-105	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G008780 PE=4 SV=1	[more]
M5VR81_PRUPE	9.6e-39	50.24	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009094mg PE=4 SV=1	[more]
W9S2D6_9ROSA	2.4e-34	48.36	Uncharacterized protein OS=Morus notabilis GN=L484_011949 PE=4 SV=1	[more]
I3SSQ3_MEDTR	6.9e-29	47.34	Uncharacterized protein OS=Medicago truncatula PE=2 SV=1	[more]
I3SNI4_MEDTR	2.6e-28	47.34	Uncharacterized protein OS=Medicago truncatula GN=MTR_4g116830 PE=2 SV=1	[more]

BLAST of CSPI02G02280.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G02040.1	5.4e-09	34.92	unknown protein	[more]
AT4G32020.1	1.2e-08	31.31	unknown protein	[more]

BLAST of CSPI02G02280.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778666298\|ref\|XP_011648719.1\|	1.1e-104	100.00	PREDICTED: uncharacterized protein LOC105434545 [Cucumis sativus]	[more]
gi\|659070816\|ref\|XP_008456814.1\|	2.7e-95	92.20	PREDICTED: uncharacterized protein LOC103496651 [Cucumis melo]	[more]
gi\|645275588\|ref\|XP_008242890.1\|	6.2e-39	50.72	PREDICTED: uncharacterized protein LOC103341189 [Prunus mume]	[more]
gi\|595805386\|ref\|XP_007202287.1\|	1.4e-38	50.24	hypothetical protein PRUPE_ppa009094mg [Prunus persica]	[more]
gi\|694421156\|ref\|XP_009338438.1\|	8.9e-38	50.72	PREDICTED: uncharacterized protein LOC103930788 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI02G02280	CSPI02G02280	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI02G02280.1	CSPI02G02280.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI02G02280.1.cds1	CSPI02G02280.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33670	FAMILY NOT NAMED	coord: 2..203 score: 9.7
None	No IPR available	PANTHER	PTHR33670:SF3	SUBFAMILY NOT NAMED	coord: 2..203 score: 9.7