CSPI02G02280 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI02G02280
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	At4g02040
Location	Chr2 : 1557960 .. 1558571 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACCGTGATTCTTCCGCCACAGGACTGCCTTGGGAAAGGCTTACGCCACCAAGGATTGGTGCTATCAGCACCGTTGAGTTCTCGGCGAAATTCTAACCCTAATAGTACTAGTACTTCTTCAAACCCTAACTTGAATCATGATGCTAGGAGTTGTTCAGGCAGACGGAGGAGGAGTGCATCGGTGGGATTGAAGGCTAACCGTCAAGCTAACAGAGAGCGGAGCCGGGTGAGGGAGTCATCTACTACGGCGAAGATGGCAACGAGGAGTTTGGTTATGGGACAGGTTAAGATCCTGAAGCGTGGAGAAATATTGACTCCTGATCGAGGAGTTGGTGCTGGTGGTGATGATTCTTGTGGTAAGAGGAGATTAGAATCGAAAGGTGAGGAGGTGGATTTGGTTTTGGGATCTACTGATCGGTTGGGTCCAGACGCTGATTTGATGCAGAAGCAGGTTGTGTTAACGGACTTCAAGGATGGTATGTATGCTGGATCGGGTGCGTTCTTCGCTTCGCCGCCTCCGAGTTCGGTGCCCTTGCCGTCTTTTGCAGTTAAGAACGGGATTGCAACAACCGATCTTAGGCGGTTGCTACGACTTGATTTAGAATGA

mRNA sequence

ATGGCAACCGTGATTCTTCCGCCACAGGACTGCCTTGGGAAAGGCTTACGCCACCAAGGATTGGTGCTATCAGCACCGTTGAGTTCTCGGCGAAATTCTAACCCTAATAGTACTAGTACTTCTTCAAACCCTAACTTGAATCATGATGCTAGGAGTTGTTCAGGCAGACGGAGGAGGAGTGCATCGGTGGGATTGAAGGCTAACCGTCAAGCTAACAGAGAGCGGAGCCGGGTGAGGGAGTCATCTACTACGGCGAAGATGGCAACGAGGAGTTTGGTTATGGGACAGGTTAAGATCCTGAAGCGTGGAGAAATATTGACTCCTGATCGAGGAGTTGGTGCTGGTGGTGATGATTCTTGTGGTAAGAGGAGATTAGAATCGAAAGGTGAGGAGGTGGATTTGGTTTTGGGATCTACTGATCGGTTGGGTCCAGACGCTGATTTGATGCAGAAGCAGGTTGTGTTAACGGACTTCAAGGATGGTATGTATGCTGGATCGGGTGCGTTCTTCGCTTCGCCGCCTCCGAGTTCGGTGCCCTTGCCGTCTTTTGCAGTTAAGAACGGGATTGCAACAACCGATCTTAGGCGGTTGCTACGACTTGATTTAGAATGA

Coding sequence (CDS)

ATGGCAACCGTGATTCTTCCGCCACAGGACTGCCTTGGGAAAGGCTTACGCCACCAAGGATTGGTGCTATCAGCACCGTTGAGTTCTCGGCGAAATTCTAACCCTAATAGTACTAGTACTTCTTCAAACCCTAACTTGAATCATGATGCTAGGAGTTGTTCAGGCAGACGGAGGAGGAGTGCATCGGTGGGATTGAAGGCTAACCGTCAAGCTAACAGAGAGCGGAGCCGGGTGAGGGAGTCATCTACTACGGCGAAGATGGCAACGAGGAGTTTGGTTATGGGACAGGTTAAGATCCTGAAGCGTGGAGAAATATTGACTCCTGATCGAGGAGTTGGTGCTGGTGGTGATGATTCTTGTGGTAAGAGGAGATTAGAATCGAAAGGTGAGGAGGTGGATTTGGTTTTGGGATCTACTGATCGGTTGGGTCCAGACGCTGATTTGATGCAGAAGCAGGTTGTGTTAACGGACTTCAAGGATGGTATGTATGCTGGATCGGGTGCGTTCTTCGCTTCGCCGCCTCCGAGTTCGGTGCCCTTGCCGTCTTTTGCAGTTAAGAACGGGATTGCAACAACCGATCTTAGGCGGTTGCTACGACTTGATTTAGAATGA

Homology

[Close]

BLAST of CSPI02G02280 vs. TrEMBL
Match: A0A0A0LG41_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G008780 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 7.7e-105
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 1


Query: 1   MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNSNPNSTSTSSNPNLNHDARSCSGRRRRS 60
           MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNSNPNSTSTSSNPNLNHDARSCSGRRRRS
Sbjct: 1   MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNSNPNSTSTSSNPNLNHDARSCSGRRRRS 60

Query: 61  ASVGLKANRQANRERSRVRESSTTAKMATRSLVMGQVKILKRGEILTPDRGVGAGGDDSC 120
           ASVGLKANRQANRERSRVRESSTTAKMATRSLVMGQVKILKRGEILTPDRGVGAGGDDSC
Sbjct: 61  ASVGLKANRQANRERSRVRESSTTAKMATRSLVMGQVKILKRGEILTPDRGVGAGGDDSC 120

Query: 121 GKRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDFKDGMYAGSGAFFASPPPSSVPL 180
           GKRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDFKDGMYAGSGAFFASPPPSSVPL
Sbjct: 121 GKRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDFKDGMYAGSGAFFASPPPSSVPL 180

Query: 181 PSFAVKNGIATTDLRRLLRLDLE 204
           PSFAVKNGIATTDLRRLLRLDLE
Sbjct: 181 PSFAVKNGIATTDLRRLLRLDLE 203

[Close]

BLAST of CSPI02G02280 vs. TrEMBL
Match: M5VR81_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009094mg PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 9.6e-39
Identity = 104/207 (50.24%), Postives = 141/207 (68.12%), Query Frame = 1


Query: 1   MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNSNPNSTSTSSNPNLNHDARSCSGRRRRS 60
           M T IL  QDCL    RH+ L L+    SRR+ N ++ + + +PN   +A     RRR+ 
Sbjct: 102 MGTAILRSQDCLRGRFRHEALTLTPRSGSRRSPNFSNPNPNPSPNYGSNANLHQSRRRKR 161

Query: 61  ASVGLKANRQANRERSRVRESSTTAKMATRSLVMGQVKILKRGEILTPD---RGVGAGGD 120
           + +G ++N Q +R R R  + +  AK+  ++LVMGQVKIL+RGE L+P+   RG+G    
Sbjct: 162 SPMGFQSN-QHDRARDRYSDRAMVAKVPAKNLVMGQVKILRRGEALSPEKNNRGLGVVSG 221

Query: 121 DSCGKRRLESKGEEV-DLVLGSTDRLGPDADLMQKQVVLTDFK--DGMYAGSGAFFASPP 180
           D+ GK R  +K E+V DLVLGSTDRLGPD + +QKQ+ + +FK  D +YAGS AF+ASPP
Sbjct: 222 DA-GKPR--AKSEDVPDLVLGSTDRLGPDPETVQKQIKVAEFKVMDAIYAGSSAFYASPP 281

Query: 181 PSSVPLPSFAVKNGIATTDLRRLLRLD 202
           PSSVPLP+F  +NG AT+DLRRLLRLD
Sbjct: 282 PSSVPLPAFLGRNGTATSDLRRLLRLD 304

[Close]

BLAST of CSPI02G02280 vs. TrEMBL
Match: W9S2D6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011949 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.4e-34
Identity = 103/213 (48.36%), Postives = 130/213 (61.03%), Query Frame = 1


Query: 1   MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNSN-PNSTSTSSNPNLNHDARSCSGRRRR 60
           MA  +L  QDC G     + L L+AP  SRR  N P  +  SS+P           RRR+
Sbjct: 1   MAMAVLRSQDCRGGRFGDESLKLTAPFRSRRKPNFPILSPNSSDPQ---------SRRRK 60

Query: 61  SASVGLKANRQANRERSRVRESSTTAKMATRSLVMGQVKILKRGEILT-----PDRGVGA 120
            + VG +++ Q +R+ SR R  +   K    +LVMGQVKILKRGE L+      +RGVG 
Sbjct: 61  RSPVGFQSSPQ-DRDPSRSRYGALVEKAPANNLVMGQVKILKRGETLSLSPARNNRGVGV 120

Query: 121 GGDDSCGKRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDFK-----DGMYAGSGAF 180
              +S  K   +  G   DLVLGSTDRLGPD + ++KQV +++ K     DG+YAGSGAF
Sbjct: 121 VAGESNRKSTAKKVGAGADLVLGSTDRLGPDPETVKKQVRVSNHKVVASADGLYAGSGAF 180

Query: 181 FASPPPSSVPLPSFAVKNGIATTDLRRLLRLDL 203
           F SPPPSSVPLP+F  KN  ATTDLRRLL+LDL
Sbjct: 181 FPSPPPSSVPLPAFLGKNDAATTDLRRLLQLDL 203

[Close]

BLAST of CSPI02G02280 vs. TrEMBL
Match: I3SSQ3_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 6.9e-29
Identity = 98/207 (47.34%), Postives = 122/207 (58.94%), Query Frame = 1


Query: 1   MATVILPPQDCLGKG-LRHQGLVL-SAPLSSRRNSNPNSTSTSSNPNLNHDARSCSGRRR 60
           M T IL   DCL +  L +  L + S+ + SR+NSNPN    S   N NH  R    RR+
Sbjct: 1   MGTAILRSHDCLQRRFLPNDALSIPSSQIRSRKNSNPNPNCKSYVNNNNHHNR----RRK 60

Query: 61  RSASVGLKANRQANRERSRVRESSTTAKMATRSLVMGQVKILKRGEILTPDRGVGAGGDD 120
           RS     ++N+         R+ S    +A   LVMGQVKILKRGE L+P+  V    D 
Sbjct: 61  RSPVTAGQSNQHD-------RKQSVDRTVAPTKLVMGQVKILKRGEKLSPEIVVPVAEDQ 120

Query: 121 SCGKRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDF--KDGMYAGSGAFFASPPPS 180
                      + +DLVLGSTDR GPD   MQKQ+ ++D   KD +YAGSG F +SPPPS
Sbjct: 121 KV------KAAKAMDLVLGSTDRFGPDPITMQKQIRVSDSVSKDVIYAGSG-FVSSPPPS 180

Query: 181 SVPLPSFAVKNGIATTDLRRLLRLDLE 204
           SVP+P F  KNG+AT+DLRRLLRLDLE
Sbjct: 181 SVPVPGFLGKNGVATSDLRRLLRLDLE 189

[Close]

BLAST of CSPI02G02280 vs. TrEMBL
Match: I3SNI4_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_4g116830 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.6e-28
Identity = 98/207 (47.34%), Postives = 122/207 (58.94%), Query Frame = 1


Query: 1   MATVILPPQDCLGKG-LRHQGLVL-SAPLSSRRNSNPNSTSTSSNPNLNHDARSCSGRRR 60
           M T IL   DCL +  L +  L + S+ + SR+NSNPN    S   N NH  R    RR+
Sbjct: 1   MGTAILRSHDCLQRRFLPNDALSIPSSQIRSRKNSNPNPNCKSYVNNNNHHNR----RRK 60

Query: 61  RSASVGLKANRQANRERSRVRESSTTAKMATRSLVMGQVKILKRGEILTPDRGVGAGGDD 120
           RS     ++N+         R+ S    +A   LVMGQVKILKRGE L+P+  V    D 
Sbjct: 61  RSPVTTGQSNQHD-------RKQSVDRTVAPTKLVMGQVKILKRGEKLSPEIVVPVAEDQ 120

Query: 121 SCGKRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDF--KDGMYAGSGAFFASPPPS 180
                      + +DLVLGSTDR GPD   MQKQ+ ++D   KD +YAGSG F +SPPPS
Sbjct: 121 KV------KAVKAMDLVLGSTDRFGPDPITMQKQIRVSDSVSKDVIYAGSG-FVSSPPPS 180

Query: 181 SVPLPSFAVKNGIATTDLRRLLRLDLE 204
           SVP+P F  KNG+AT+DLRRLLRLDLE
Sbjct: 181 SVPVPGFLGKNGVATSDLRRLLRLDLE 189

[Close]

BLAST of CSPI02G02280 vs. TAIR10
Match: AT4G02040.1 (AT4G02040.1 unknown protein)

HSP 1 Score: 58.5 bits (140), Expect = 5.4e-09
Identity = 44/126 (34.92%), Postives = 70/126 (55.56%), Query Frame = 1


Query: 69  RQANRERSRVRESSTTAKM--ATRSLVMGQVKILKRGEILTP--DRGVGAGGDDSCGKRR 128
           R ++    R ++S T  K   A  +LVM QVKILKRGE L+           DD+  +R 
Sbjct: 30  RNSSTAPRRRKQSPTVVKSPAANPNLVMEQVKILKRGETLSAFNKNKENISSDDT--RRP 89

Query: 129 LESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDFKDGMYAGSGAFFASPPPSSVPLPSF- 188
           +    ++VDL++ +T+R+GP+ +++ KQ+     +   +AG+     SPPPS VP+P F 
Sbjct: 90  VLKMIKDVDLIVSATNRIGPEPEILMKQIGALGLQS--FAGANCSL-SPPPSCVPIPCFL 149

Query: 189 AVKNGI 190
             KN +
Sbjct: 150 GTKNNL 150

[Close]

BLAST of CSPI02G02280 vs. TAIR10
Match: AT4G32020.1 (AT4G32020.1 unknown protein)

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-08
Identity = 67/214 (31.31%), Postives = 89/214 (41.59%), Query Frame = 1


Query: 1   MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNSNPNSTSTSSNPNL-NHDARSCSGRRRR 60
           M   +L PQDCL     H           +++ NP++        + N+  R    R + 
Sbjct: 1   MGVAVLNPQDCLKDPFSHM----------KQHRNPSACPNRQKKTVSNNRTRRSPPRSQS 60

Query: 61  SASVGLKANRQANRERSRVRE---SSTTAKMATRSLVMGQVKILKRGEILTPDRGVGAGG 120
           S S            R+ V       T  K  + ++ + QV+ILKRGE            
Sbjct: 61  SRSSSPPVAPPLPPPRAAVSAFVPKGTLKKSLSNTVAVSQVRILKRGE------------ 120

Query: 121 DDSCGKRRLESKGEEVDLV-----LGSTDRLGPDADLMQKQVVLTDFKDG---MYAGSGA 180
                    E   E  DLV     LGST R+GPD  L+  Q+ L+  K      YAG   
Sbjct: 121 ---------EIPKETSDLVVEMSDLGSTRRIGPDPGLIPGQIRLSGRKSKSAPFYAGP-V 180

Query: 181 FFASPPPSSVPLPSFAVKNGIATTDLRRLLRLDL 203
              SPPPS VPLP+F  K   AT DL R+LRLD+
Sbjct: 181 TMTSPPPSDVPLPAFFTKK--ATNDLIRILRLDI 180

[Close]

BLAST of CSPI02G02280 vs. NCBI nr
Match: gi|778666298|ref|XP_011648719.1| (PREDICTED: uncharacterized protein LOC105434545 [Cucumis sativus])

HSP 1 Score: 387.9 bits (995), Expect = 1.1e-104
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 1


Query: 1   MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNSNPNSTSTSSNPNLNHDARSCSGRRRRS 60
           MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNSNPNSTSTSSNPNLNHDARSCSGRRRRS
Sbjct: 1   MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNSNPNSTSTSSNPNLNHDARSCSGRRRRS 60

Query: 61  ASVGLKANRQANRERSRVRESSTTAKMATRSLVMGQVKILKRGEILTPDRGVGAGGDDSC 120
           ASVGLKANRQANRERSRVRESSTTAKMATRSLVMGQVKILKRGEILTPDRGVGAGGDDSC
Sbjct: 61  ASVGLKANRQANRERSRVRESSTTAKMATRSLVMGQVKILKRGEILTPDRGVGAGGDDSC 120

Query: 121 GKRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDFKDGMYAGSGAFFASPPPSSVPL 180
           GKRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDFKDGMYAGSGAFFASPPPSSVPL
Sbjct: 121 GKRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDFKDGMYAGSGAFFASPPPSSVPL 180

Query: 181 PSFAVKNGIATTDLRRLLRLDLE 204
           PSFAVKNGIATTDLRRLLRLDLE
Sbjct: 181 PSFAVKNGIATTDLRRLLRLDLE 203

[Close]

BLAST of CSPI02G02280 vs. NCBI nr
Match: gi|659070816|ref|XP_008456814.1| (PREDICTED: uncharacterized protein LOC103496651 [Cucumis melo])

HSP 1 Score: 356.7 bits (914), Expect = 2.7e-95
Identity = 189/205 (92.20%), Postives = 193/205 (94.15%), Query Frame = 1


Query: 1   MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNSNPNSTSTSSNPNLNHDARSCSGRRRRS 60
           MATVILPPQDCLGKGLRHQGLVLSAPL+SRRNSNPNS STSSNPN NHD +SCSGRRRRS
Sbjct: 1   MATVILPPQDCLGKGLRHQGLVLSAPLNSRRNSNPNSASTSSNPNFNHDDKSCSGRRRRS 60

Query: 61  ASVGLKANRQANRERSRVRESSTTAKMATRSLVMGQVKILKRGEILTPDRGV--GAGGDD 120
           ASVGLKANRQANRERSRVRESSTTAKM T+SLVMGQVKILKRGEILTP RGV  G GG D
Sbjct: 61  ASVGLKANRQANRERSRVRESSTTAKMTTKSLVMGQVKILKRGEILTPGRGVGGGGGGGD 120

Query: 121 SCGKRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDFKDGMYAGSGAFFASPPPSSV 180
           SCGKRRLESK EEVDLVLGSTDRLGPD DLMQKQVVLT+FKDGMYAGSGAFFASPPPSSV
Sbjct: 121 SCGKRRLESKVEEVDLVLGSTDRLGPDPDLMQKQVVLTEFKDGMYAGSGAFFASPPPSSV 180

Query: 181 PLPSFAVKNGIATTDLRRLLRLDLE 204
           PLPSF VKNGIATTDLRRLLRLDLE
Sbjct: 181 PLPSFVVKNGIATTDLRRLLRLDLE 205

[Close]

BLAST of CSPI02G02280 vs. NCBI nr
Match: gi|645275588|ref|XP_008242890.1| (PREDICTED: uncharacterized protein LOC103341189 [Prunus mume])

HSP 1 Score: 169.5 bits (428), Expect = 6.2e-39
Identity = 105/207 (50.72%), Postives = 142/207 (68.60%), Query Frame = 1


Query: 1   MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNSNPNSTSTSSNPNLNHDARSCSGRRRRS 60
           M T IL  QDCL   LRH+ L L+    SRR+ N ++ + + +PN   +A     RRR+ 
Sbjct: 1   MGTAILRSQDCLRGRLRHEALTLTPRSGSRRSPNFSNPNPNHSPNYGSNANLHQSRRRKR 60

Query: 61  ASVGLKANRQANRERSRVRESSTTAKMATRSLVMGQVKILKRGEILTPD---RGVGAGGD 120
           + +G ++N Q +R R R  + +  AK+  ++LVMGQVKIL+RGE L+P+   RG+G    
Sbjct: 61  SPMGFQSN-QHDRGRDRYSDRAMVAKVPAKNLVMGQVKILRRGEALSPEKNNRGLGVVSG 120

Query: 121 DSCGKRRLESKGEEV-DLVLGSTDRLGPDADLMQKQVVLTDFK--DGMYAGSGAFFASPP 180
           D+ GK R  +K E+V DLVLGSTDRLGPD + +QKQ+ + +FK  D +YAGS AF+ASPP
Sbjct: 121 DA-GKPR--AKSEDVPDLVLGSTDRLGPDPETVQKQIKVAEFKVMDAIYAGSSAFYASPP 180

Query: 181 PSSVPLPSFAVKNGIATTDLRRLLRLD 202
           PSSVPLP+F  +NG AT+DLRRLLRLD
Sbjct: 181 PSSVPLPAFLGRNGTATSDLRRLLRLD 203

[Close]

BLAST of CSPI02G02280 vs. NCBI nr
Match: gi|595805386|ref|XP_007202287.1| (hypothetical protein PRUPE_ppa009094mg [Prunus persica])

HSP 1 Score: 168.3 bits (425), Expect = 1.4e-38
Identity = 104/207 (50.24%), Postives = 141/207 (68.12%), Query Frame = 1


Query: 1   MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNSNPNSTSTSSNPNLNHDARSCSGRRRRS 60
           M T IL  QDCL    RH+ L L+    SRR+ N ++ + + +PN   +A     RRR+ 
Sbjct: 102 MGTAILRSQDCLRGRFRHEALTLTPRSGSRRSPNFSNPNPNPSPNYGSNANLHQSRRRKR 161

Query: 61  ASVGLKANRQANRERSRVRESSTTAKMATRSLVMGQVKILKRGEILTPD---RGVGAGGD 120
           + +G ++N Q +R R R  + +  AK+  ++LVMGQVKIL+RGE L+P+   RG+G    
Sbjct: 162 SPMGFQSN-QHDRARDRYSDRAMVAKVPAKNLVMGQVKILRRGEALSPEKNNRGLGVVSG 221

Query: 121 DSCGKRRLESKGEEV-DLVLGSTDRLGPDADLMQKQVVLTDFK--DGMYAGSGAFFASPP 180
           D+ GK R  +K E+V DLVLGSTDRLGPD + +QKQ+ + +FK  D +YAGS AF+ASPP
Sbjct: 222 DA-GKPR--AKSEDVPDLVLGSTDRLGPDPETVQKQIKVAEFKVMDAIYAGSSAFYASPP 281

Query: 181 PSSVPLPSFAVKNGIATTDLRRLLRLD 202
           PSSVPLP+F  +NG AT+DLRRLLRLD
Sbjct: 282 PSSVPLPAFLGRNGTATSDLRRLLRLD 304

[Close]

BLAST of CSPI02G02280 vs. NCBI nr
Match: gi|694421156|ref|XP_009338438.1| (PREDICTED: uncharacterized protein LOC103930788 [Pyrus x bretschneideri])

HSP 1 Score: 165.6 bits (418), Expect = 8.9e-38
Identity = 106/209 (50.72%), Postives = 138/209 (66.03%), Query Frame = 1


Query: 1   MATVILPPQDCLGKGLRHQGLVLS-APLS-SRRNSNPNSTSTSSNPNLNHDARSCSGRRR 60
           M T IL  QDCL    RH+ L L+ +P S SRR+SN ++ + +S PN    A     RRR
Sbjct: 1   MRTAILRSQDCLRGRFRHEALTLTLSPRSGSRRSSNFSNPNPNSTPNHGSTANIHQSRRR 60

Query: 61  RSASVGLKANRQANRERSRVRESSTTAKMATRSLVMGQVKILKRGEILTPD---RGVGAG 120
           + + +GL++N Q  R R R  + +  AK   ++LV+GQVKIL+RGE L P+   RG+G  
Sbjct: 61  KRSPMGLQSN-QHERPRDRCSDRAAVAKAPGKNLVIGQVKILRRGEDLNPEKNNRGLGVV 120

Query: 121 GDDSCGKRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDFK--DGMYAGSGAFFASP 180
             D   ++    K  + DLVLGSTDRLGPD + +QKQ+   +FK  DG+YAGS AF+ASP
Sbjct: 121 AHDD--RKPKAKKENDPDLVLGSTDRLGPDPETVQKQIKAAEFKVMDGIYAGSSAFYASP 180

Query: 181 PPSSVPLPSFAVKNGIATTDLRRLLRLDL 203
           PPSSVPLPSF  +NG AT+DLRRLLRLDL
Sbjct: 181 PPSSVPLPSFLGRNGPATSDLRRLLRLDL 206

The following BLAST results are available for this feature:

BLAST of CSPI02G02280 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI02G02280 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LG41_CUCSA	7.7e-105	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G008780 PE=4 SV=1	[more]
M5VR81_PRUPE	9.6e-39	50.24	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009094mg PE=4 SV=1	[more]
W9S2D6_9ROSA	2.4e-34	48.36	Uncharacterized protein OS=Morus notabilis GN=L484_011949 PE=4 SV=1	[more]
I3SSQ3_MEDTR	6.9e-29	47.34	Uncharacterized protein OS=Medicago truncatula PE=2 SV=1	[more]
I3SNI4_MEDTR	2.6e-28	47.34	Uncharacterized protein OS=Medicago truncatula GN=MTR_4g116830 PE=2 SV=1	[more]

BLAST of CSPI02G02280 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G02040.1	5.4e-09	34.92	unknown protein	[more]
AT4G32020.1	1.2e-08	31.31	unknown protein	[more]

BLAST of CSPI02G02280 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778666298\|ref\|XP_011648719.1\|	1.1e-104	100.00	PREDICTED: uncharacterized protein LOC105434545 [Cucumis sativus]	[more]
gi\|659070816\|ref\|XP_008456814.1\|	2.7e-95	92.20	PREDICTED: uncharacterized protein LOC103496651 [Cucumis melo]	[more]
gi\|645275588\|ref\|XP_008242890.1\|	6.2e-39	50.72	PREDICTED: uncharacterized protein LOC103341189 [Prunus mume]	[more]
gi\|595805386\|ref\|XP_007202287.1\|	1.4e-38	50.24	hypothetical protein PRUPE_ppa009094mg [Prunus persica]	[more]
gi\|694421156\|ref\|XP_009338438.1\|	8.9e-38	50.72	PREDICTED: uncharacterized protein LOC103930788 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G02280.1	CSPI02G02280.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33670	FAMILY NOT NAMED	coord: 2..203 score: 9.7
None	No IPR available	PANTHER	PTHR33670:SF3	SUBFAMILY NOT NAMED	coord: 2..203 score: 9.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI02G02280	Csa2G008780	Cucumber (Chinese Long) v2	cpicuB065
CSPI02G02280	MELO3C004451	Melon (DHL92) v3.5.1	cpimeB139
CSPI02G02280	ClCG11G003650	Watermelon (Charleston Gray)	cpiwcgB102
CSPI02G02280	Lsi11G003800	Bottle gourd (USVL1VR-Ls)	cpilsiB096
CSPI02G02280	MELO3C004451.2	Melon (DHL92) v3.6.1	cpimedB132
CSPI02G02280	CsaV3_2G003470	Cucumber (Chinese Long) v3	cpicucB080
CSPI02G02280	CmaCh12G011660	Cucurbita maxima (Rimu)	cmacpiB173
CSPI02G02280	CsGy2G002370	Cucumber (Gy14) v2	cgybcpiB056

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI02G02280	Cucumber (Chinese Long) v3	cpicucB076
CSPI02G02280	Watermelon (97103) v2	cpiwmbB105
CSPI02G02280	Watermelon (97103) v2	cpiwmbB153
CSPI02G02280	Wax gourd	cpiwgoB137
CSPI02G02280	Wax gourd	cpiwgoB213
CSPI02G02280	Wild cucumber (PI 183967)	cpicpiB011
CSPI02G02280	Cucumber (Gy14) v1	cgycpiB187
CSPI02G02280	Cucumber (Gy14) v1	cgycpiB519
CSPI02G02280	Cucurbita maxima (Rimu)	cmacpiB072
CSPI02G02280	Cucurbita maxima (Rimu)	cmacpiB113
CSPI02G02280	Cucurbita maxima (Rimu)	cmacpiB174
CSPI02G02280	Cucurbita maxima (Rimu)	cmacpiB800
CSPI02G02280	Cucurbita moschata (Rifu)	cmocpiB064
CSPI02G02280	Cucurbita moschata (Rifu)	cmocpiB106
CSPI02G02280	Cucurbita moschata (Rifu)	cmocpiB159
CSPI02G02280	Cucurbita moschata (Rifu)	cmocpiB787
CSPI02G02280	Cucumber (Chinese Long) v2	cpicuB062
CSPI02G02280	Melon (DHL92) v3.5.1	cpimeB109
CSPI02G02280	Watermelon (Charleston Gray)	cpiwcgB146
CSPI02G02280	Watermelon (Charleston Gray)	cpiwcgB159
CSPI02G02280	Watermelon (97103) v1	cpiwmB131
CSPI02G02280	Watermelon (97103) v1	cpiwmB165
CSPI02G02280	Watermelon (97103) v1	cpiwmB179
CSPI02G02280	Cucurbita pepo (Zucchini)	cpecpiB100
CSPI02G02280	Cucurbita pepo (Zucchini)	cpecpiB670
CSPI02G02280	Cucurbita pepo (Zucchini)	cpecpiB813
CSPI02G02280	Bottle gourd (USVL1VR-Ls)	cpilsiB132
CSPI02G02280	Melon (DHL92) v3.6.1	cpimedB104
CSPI02G02280	Cucumber (Gy14) v2	cgybcpiB018
CSPI02G02280	Cucumber (Gy14) v2	cgybcpiB106
CSPI02G02280	Silver-seed gourd	carcpiB0145
CSPI02G02280	Silver-seed gourd	carcpiB0286
CSPI02G02280	Silver-seed gourd	carcpiB1109