CSPI01G20570.1 (mRNA) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G20570.1
Type	mRNA
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	RING/FYVE/PHD zinc finger superfamily protein, putative isoform 1
Location	Chr1 : 16239808 .. 16242209 (-)
Sequence length	1086

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCATCAATTATTTTTGGTCATTTTGCCTTCTCTCTGTTTGTAACACTTTTGTATATTACAAAGAGAAAAAGAAAACGAAGCATAAACTTAGTGTAAATTTGTAATATGCAAAATGAGTGATCTACAAAGGCAAAGTGAAAAGTTTGCGTCTATTGAAGTCAGGGAACCCCCCCAATGAATCAAATTTGAGTTCATAAACACGGACGTTGTCTTTTCTTCAAATATATAAAAGAGAAAAAAGAGAAAAAAGAGAAATAAAAACGCATAATTTTGAATTAAGATGAATCTGGGATTCTGAGTGGTAAAGGAGCAGAAAGGAAAGCATATTTTTTTTTCCACAACTGGGTTGATCATTCGGAAGAACTGGCTGATTGTACGCTTCTTTTGGTTAGTTTAATCTTTCCTTCTCTACTCTAAGAATCGGGAACAGAGTATAGCATGATGTTGTTCAACTTTTTTGCCCATTTTTCAATTGTTGGTTGCTTGTTTTTAAACTTCATTTGTTATTTGAATGGATTCTTTAGCAGTATTTGAGTATATAACTGATTGACTTAAGAGGTATTAGTGTGGAAAATATGGTCTGCTATGATGGATTTTTCTGATGTGGTTGTGGCAGTCGACGAAAACTTTAGAATTACATGCGTAGATTGTTTTTTTATTTAATGGGTTGTGATTTAAAGTGGAAGGTTTGTGTAGGAGGATGAGATAAATTGGGATAATATTTTTTTCTCTAAGTTGCTCGATAATGTGAAGTTGGATGGACGGTTATTATTATTTGACTGGGAAAATTTAGGGTTCAATCTTTTGGAGTTGGGGAGATTGGGACTGAGTAGATAGATTTTGGTGAGTTCCAGGGTGAGATTTTGTCCGTGATTTCTTGGTTTGCCATCGTGTCATTGGCTATGTCAACTTGAAGGGTTTCCAATCAGGAGGGAGATTGATACATTAATGGAGTTATATTCGATTCTTTTTTTTCTTTCAGAAAACTAAAAGAAATCTTTGAGAACCTGTTGATGGATTATAGATTTACGTGAGATCTGCAGTTCAATTTCTTAAGAGAGGCATGTTGCTTTTTGTCTATCCGAGATAATATGCTGATAGAAAATGATCGGATGTGCTCCACTGCTCTAGAAAAACTTCCCTGTTTTCTACTTAATGTCTTATGTCGTGCTTGCTCTTGAAATTCACAGATGTGCCCCCATTGTGATGAATTCTCTCATGATGGCTGCAGAAAAGCTGGACGCATTGAGGAAAAGAAGAACAGTGGTGGATTGCGTTGCTTAAATTTTCCTAGGACCTTTCCAACTGTCATTATGATGCCTGAAGGTTCAAAATCTAATGTAGTATATAGGAGAAAGAAACTGCGGGGCAGTTCTGATTCCAGGTTTTTGGCTAATGGGACAGATTGTATATCTTTGATTAGTTGTGATGGTAATTTGGCAGAAGACAAAGAGCAAGCTGCAGCTTCTCAACATAACCACGAGCGTGAAATTGTTGGAAATGCTGTCCCTCCTTTTCCTGTTTGTGATGGGAAAACTCAAGTTTCAGAACTAGAATCAGCCAATGGTTGTATCTTTGGGGAAGGGCATGGTTCAGACGAAACACCTAACAATAACTTGCAAAAAAGTTTGGAGGTTGACAGCATTAATGATAGCTGCTCCTCATCTAAGTCAAACATGGAACTTGTTTCAGCTTCCCTGAAAGTTGAAGTGGATGACACAGGTGAGTGCTCCTCTTCTAGCATTCAAGTTATGGGGGATGCGATCGAGGATATTTCTGGAAGAGATCTATGCATCTCTATACTTAGAAGCAATGGGCTGTTGTCTTCTACGACTCATGCTCCTGAGGAAGAAAGTGATTTTAGAAGTGACAATAACTGTTTTCGATTGTGCAAAACTTGTGGCTCTTCAGAATCAGTCTTGAAGATGTTAATCTGTGATCATTGCGAGGATGCATTTCATGTCTCATGTTGCAATCATCGCATGAAGAGAGTGTCAAATGATGAGTGGTGTTGCAATTCATGTCTGAAAAAAAATCACAAAATTTTGAAGGAAGCAATCTCAAAGAAATTGACAAACACCTCGAGTAGAAATGGATCTTCTAAGGGTGAATCAAATTCTATAGCATTAATGTTGAAGGACACAAAACCTTATACAACTTGTATTCGGATTGGCAAAGGTTTTCAAGCAGAAGTTCCAGATTGGTCTGGCCCGATTTCAGAGTATGTTATTTTCTTTAACTATATGTATATTTTCTTCATGCAAACTTAAAATTAATGGTTTTATTAGGTAATTCATTCTTTGGGGGAAGTTGATTCCGCCCCCCACCCCTCACCCCCTGGTTTAGAAACAAAACTGAGGTATTGCCTACTCATGTTATTGACCATTATCCGAACTTTTAA

mRNA sequence

ATGTGCCCCCATTGTGATGAATTCTCTCATGATGGCTGCAGAAAAGCTGGACGCATTGAGGAAAAGAAGAACAGTGGTGGATTGCGTTGCTTAAATTTTCCTAGGACCTTTCCAACTGTCATTATGATGCCTGAAGGTTCAAAATCTAATGTAGTATATAGGAGAAAGAAACTGCGGGGCAGTTCTGATTCCAGGTTTTTGGCTAATGGGACAGATTGTATATCTTTGATTAGTTGTGATGGTAATTTGGCAGAAGACAAAGAGCAAGCTGCAGCTTCTCAACATAACCACGAGCGTGAAATTGTTGGAAATGCTGTCCCTCCTTTTCCTGTTTGTGATGGGAAAACTCAAGTTTCAGAACTAGAATCAGCCAATGGTTGTATCTTTGGGGAAGGGCATGGTTCAGACGAAACACCTAACAATAACTTGCAAAAAAGTTTGGAGGTTGACAGCATTAATGATAGCTGCTCCTCATCTAAGTCAAACATGGAACTTGTTTCAGCTTCCCTGAAAGTTGAAGTGGATGACACAGGTGAGTGCTCCTCTTCTAGCATTCAAGTTATGGGGGATGCGATCGAGGATATTTCTGGAAGAGATCTATGCATCTCTATACTTAGAAGCAATGGGCTGTTGTCTTCTACGACTCATGCTCCTGAGGAAGAAAGTGATTTTAGAAGTGACAATAACTGTTTTCGATTGTGCAAAACTTGTGGCTCTTCAGAATCAGTCTTGAAGATGTTAATCTGTGATCATTGCGAGGATGCATTTCATGTCTCATGTTGCAATCATCGCATGAAGAGAGTGTCAAATGATGAGTGGTGTTGCAATTCATGTCTGAAAAAAAATCACAAAATTTTGAAGGAAGCAATCTCAAAGAAATTGACAAACACCTCGAGTAGAAATGGATCTTCTAAGGGTGAATCAAATTCTATAGCATTAATGTTGAAGGACACAAAACCTTATACAACTTGTATTCGGATTGGCAAAGGTTTTCAAGCAGAAGTTCCAGATTGGTCTGGCCCGATTTCAGAAAACAAAACTGAGGTATTGCCTACTCATGTTATTGACCATTATCCGAACTTTTAA

Coding sequence (CDS)

ATGTGCCCCCATTGTGATGAATTCTCTCATGATGGCTGCAGAAAAGCTGGACGCATTGAGGAAAAGAAGAACAGTGGTGGATTGCGTTGCTTAAATTTTCCTAGGACCTTTCCAACTGTCATTATGATGCCTGAAGGTTCAAAATCTAATGTAGTATATAGGAGAAAGAAACTGCGGGGCAGTTCTGATTCCAGGTTTTTGGCTAATGGGACAGATTGTATATCTTTGATTAGTTGTGATGGTAATTTGGCAGAAGACAAAGAGCAAGCTGCAGCTTCTCAACATAACCACGAGCGTGAAATTGTTGGAAATGCTGTCCCTCCTTTTCCTGTTTGTGATGGGAAAACTCAAGTTTCAGAACTAGAATCAGCCAATGGTTGTATCTTTGGGGAAGGGCATGGTTCAGACGAAACACCTAACAATAACTTGCAAAAAAGTTTGGAGGTTGACAGCATTAATGATAGCTGCTCCTCATCTAAGTCAAACATGGAACTTGTTTCAGCTTCCCTGAAAGTTGAAGTGGATGACACAGGTGAGTGCTCCTCTTCTAGCATTCAAGTTATGGGGGATGCGATCGAGGATATTTCTGGAAGAGATCTATGCATCTCTATACTTAGAAGCAATGGGCTGTTGTCTTCTACGACTCATGCTCCTGAGGAAGAAAGTGATTTTAGAAGTGACAATAACTGTTTTCGATTGTGCAAAACTTGTGGCTCTTCAGAATCAGTCTTGAAGATGTTAATCTGTGATCATTGCGAGGATGCATTTCATGTCTCATGTTGCAATCATCGCATGAAGAGAGTGTCAAATGATGAGTGGTGTTGCAATTCATGTCTGAAAAAAAATCACAAAATTTTGAAGGAAGCAATCTCAAAGAAATTGACAAACACCTCGAGTAGAAATGGATCTTCTAAGGGTGAATCAAATTCTATAGCATTAATGTTGAAGGACACAAAACCTTATACAACTTGTATTCGGATTGGCAAAGGTTTTCAAGCAGAAGTTCCAGATTGGTCTGGCCCGATTTCAGAAAACAAAACTGAGGTATTGCCTACTCATGTTATTGACCATTATCCGAACTTTTAA

Homology

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BLAST of CSPI01G20570.1 vs. TrEMBL
Match: A0A0A0LU88_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G425890 PE=4 SV=1)

HSP 1 Score: 703.7 bits (1815), Expect = 1.1e-199
Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 1


Query: 1   MCPHCDEFSHDGCRKAGRIEEKKNSGGLRCLNFPRTFPTVIMMPEGSKSNVVYRRKKLRG 60
           MCPHCDEFSHDGCRKAGRIEEKKNSGGLRCLNFPRTFPTVIMMPEGSKSNVVYRRKKLRG
Sbjct: 1   MCPHCDEFSHDGCRKAGRIEEKKNSGGLRCLNFPRTFPTVIMMPEGSKSNVVYRRKKLRG 60

Query: 61  SSDSRFLANGTDCISLISCDGNLAEDKEQAAASQHNHEREIVGNAVPPFPVCDGKTQVSE 120
           SSDSRFLANGTDCISLISCDGNLAEDKEQAAASQHNHEREIVGNAVPPFPVCDGKTQVSE
Sbjct: 61  SSDSRFLANGTDCISLISCDGNLAEDKEQAAASQHNHEREIVGNAVPPFPVCDGKTQVSE 120

Query: 121 LESANGCIFGEGHGSDETPNNNLQKSLEVDSINDSCSSSKSNMELVSASLKVEVDDTGEC 180
           LESANGCIFGEGHGSDETPNNNLQKSLEVDSINDSCSSSKSNMELVSASLKVEVDDTGEC
Sbjct: 121 LESANGCIFGEGHGSDETPNNNLQKSLEVDSINDSCSSSKSNMELVSASLKVEVDDTGEC 180

Query: 181 SSSSIQVMGDAIEDISGRDLCISILRSNGLLSSTTHAPEEESDFRSDNNCFRLCKTCGSS 240
           SSSSIQVMGDAIEDISGRDLCISILRSNGLLSSTTHAPEEESDFRSDNNCFRLCKTCGSS
Sbjct: 181 SSSSIQVMGDAIEDISGRDLCISILRSNGLLSSTTHAPEEESDFRSDNNCFRLCKTCGSS 240

Query: 241 ESVLKMLICDHCEDAFHVSCCNHRMKRVSNDEWCCNSCLKKNHKILKEAISKKLTNTSSR 300
           ESVLKMLICDHCEDAFHVSCCNHRMKRVSNDEWCCNSCLKKNHKILKEAISKKLTNTSSR
Sbjct: 241 ESVLKMLICDHCEDAFHVSCCNHRMKRVSNDEWCCNSCLKKNHKILKEAISKKLTNTSSR 300

Query: 301 NGSSKGESNSIALMLKDTKPYTTCIRIGKGFQAEVPDWSGPISE 345
           NGSSKGESNSIALMLKDTKPYTTCIRIGKGFQAEVPDWSGPISE
Sbjct: 301 NGSSKGESNSIALMLKDTKPYTTCIRIGKGFQAEVPDWSGPISE 344

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BLAST of CSPI01G20570.1 vs. TrEMBL
Match: F6I5N1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0103g00660 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 3.4e-71
Identity = 166/364 (45.60%), Postives = 214/364 (58.79%), Query Frame = 1


Query: 1   MCPHCDEFSHDGCRKAGRIEE-KKNSGGLRCLNFPRT---FPTVIMMPEGSKSNVVYRRK 60
           M   CD+    GCRKA  I E +KN      LNFP++     T+ +M EGS  N VY+R+
Sbjct: 9   MYSKCDKHPQGGCRKAVPITEGRKNDDDSCSLNFPQSCSQLSTISVMSEGSVPNFVYQRR 68

Query: 61  KLRGSSDSRFLANGT-------DCISLISCDGNLAEDKEQAAASQHNHEREIVGNAVPPF 120
           KLR    + F A  +        C+S +S +      K++    Q   E E V + V   
Sbjct: 69  KLRRKHATIFSAQASADTKASAGCLSAVSSEAPSVAAKDENGVPQVGLETETVRDLVILP 128

Query: 121 PVCDGKTQVSELESANGCIFGEGHGSDETPNNNLQKSLEVDSINDSCSSSKSNMELVSAS 180
             C+ + +    +S + C   E HGSD+ P N++ K  E  S NDSCSSSKSNMEL SAS
Sbjct: 129 VECNREPKA---QSIDRCSVREEHGSDDAPKNSMSKVNEFYSANDSCSSSKSNMELGSAS 188

Query: 181 LKVEVDDTGECSSSSIQVMGDAIEDISGRDLCISILRSNGLLSS---TTHAPEEESDFRS 240
           +K +VDDT ECSSSS+  M    EDIS +DLCIS+LRS GLL     +   P +   + S
Sbjct: 189 MKNDVDDTAECSSSSVLGMATMGEDISEKDLCISVLRSEGLLRGCLPSRSCPTDGVSYGS 248

Query: 241 DNNCFRLCKTCGSSESVLKMLICDHCEDAFHVSCCNHRMKRVSNDEWCCNSCLKKNHKIL 300
           D+   R CK CG SE  LK+LICDHCE+AFH+ CCN  +K++  DEW C+SCLKK  K+L
Sbjct: 249 DSRGSRTCKVCGKSEISLKILICDHCEEAFHMFCCNPSIKKIPVDEWFCHSCLKKTRKML 308

Query: 301 KEAISKKLTN-----TSSRNGSSKGESNSIALMLKDTKPYTTCIRIGKGFQAEVPDWSGP 346
           KE   ++  N     + SRN + KGE   IA MLKDT PYTT +RIGKGFQAEV DWS P
Sbjct: 309 KETTIRRSLNINGETSRSRNTTCKGELGPIAFMLKDTGPYTTGVRIGKGFQAEVADWSSP 368

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BLAST of CSPI01G20570.1 vs. TrEMBL
Match: B9SP83_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0594380 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 1.6e-68
Identity = 166/376 (44.15%), Postives = 217/376 (57.71%), Query Frame = 1


Query: 1   MCPHCDEFSHDGCRKAGRIEEKKN------SGGLRCLNFPRTFPTVIMMPEGSKSNVVYR 60
           MCP   E+SH G R+   I E KN      S  +  L   RT  T    P+ S    VY 
Sbjct: 1   MCPKYHEYSHIGSREGASITEDKNEVYSCPSSIVTSLQLSRTVCTT---PQSSVPMFVYS 60

Query: 61  RKKLRGSSDSRFL----------ANGTDCISLIS-CDGNLAEDKEQAAASQHNHEREIVG 120
           R+KL+G++ +  +           +G DC+S++S C  +L   KEQ   SQ     E   
Sbjct: 61  RRKLQGNASTSAVFSAQDPASTKRSGEDCVSVVSYCAPSL---KEQHVVSQAELAIE--- 120

Query: 121 NAVPPFPVCDGKTQVSELESANGCIFGEGHGSDETPNNNLQKSLEVDSINDSCSSSKSNM 180
           +   P+    G++ V +LES NGC   E   SD+   +  QK +EVDSINDSCSSSKS+M
Sbjct: 121 DPNMPYIAGKGESCVMKLESLNGCSLVEERVSDQASKSTEQKIIEVDSINDSCSSSKSDM 180

Query: 181 ELVSASLKVEVDDTGECSSSSIQVMGDAIEDISGRDLCISILRSNGLLS----STTHAPE 240
           ELVSAS+  + +DT ECSSSS   +    E++S +DLC S++RS G+      S TH   
Sbjct: 181 ELVSASMHTQAEDTSECSSSSAMFVEALGEELSEKDLCTSVVRSKGVFGRVWPSRTHGSA 240

Query: 241 EESDFRSDNNCFRLCKTCGSSESVLKMLICDHCEDAFHVSCCNHRMKRVSNDEWCCNSCL 300
           E     S ++  R CK C   ES LKMLICD+CE++FH+SCCN R+KR+  DEW C+SC 
Sbjct: 241 EGVGDSSASSSSRFCKLCAHLESPLKMLICDNCEESFHLSCCNPRIKRIPQDEWFCHSCA 300

Query: 301 KKNHKILKEAISKKLTNTSSRNGSS----KGESNSIALMLKDTKPYTTCIRIGKGFQAEV 352
           KK  KIL E +S + +N     G S      ESN IALML+DT PYTT +RIGKGFQAEV
Sbjct: 301 KKRRKILTETVSTRFSNMIGEKGRSGNSYTDESNPIALMLRDTPPYTTGVRIGKGFQAEV 360

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BLAST of CSPI01G20570.1 vs. TrEMBL
Match: M5XUT5_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa017202mg PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.1e-66
Identity = 155/323 (47.99%), Postives = 208/323 (64.40%), Query Frame = 1


Query: 40  VIMMPEGSKSNVVYRRKKLRGSS-----DSRFLANGTDCISLISCD------GNLAEDKE 99
           V +M E S  N+VY+R+KLRG+S     + R      D +S ++ +       N    K+
Sbjct: 8   VSIMSESSAPNLVYKRRKLRGNSVTIFSEDRGNTRTGDYLSFVNFNVPSEDRENTRTGKK 67

Query: 100 QAAASQHNHEREIVGNAVPPFPVCDGKTQVSELESANGCIFGEGHGSDETPNNNLQKSLE 159
           Q   S   HE +    A P   +C+ ++ V   ES NGC  GE   SDE P NN+QK LE
Sbjct: 68  QLVDSHIEHETKAT-RASPH--LCNRESHVLNSESFNGCSVGEELISDEAPKNNVQKVLE 127

Query: 160 VDSINDSCSSSKSNMELVSASLKVEVDDTGECSSSSIQVMGDAIEDISGRDLCISILRSN 219
           V+S+NDSCSSSKSNME +SA   +  ++ GECSSSS+ VM +A+ D+S +DLCISILRS+
Sbjct: 128 VNSVNDSCSSSKSNMEHLSAVRIMSENENGECSSSSVIVM-EAVGDLSEKDLCISILRSH 187

Query: 220 GLLSSTTHA----PEEESDFRSDNNCFRLCKTCGSSESVLKMLICDHCEDAFHVSCCNHR 279
           GLL            E++   S ++C R CK C  + + LKMLICD+CE+AFH+SCC+ R
Sbjct: 188 GLLGDVQATRICRSAEDTGTSSSDSCHRSCKICSRAGTALKMLICDNCEEAFHMSCCHPR 247

Query: 280 MKRVSNDEWCCNSCLKKNHKILKEAISKKLTNTSS---RNGSSKGESNSIALMLKDTKPY 339
           +K+V  DEW C+SCL+K  +ILKE +++K  N +S   RN SSKG+ N I LML+D +PY
Sbjct: 248 IKKVPFDEWFCHSCLRKK-QILKEKVARKSPNITSVMCRNASSKGQVNPILLMLRDNEPY 307

Query: 340 TTCIRIGKGFQAEVPDWSGPISE 345
            T +R GKGFQAEVPDWSGPI+E
Sbjct: 308 ATSVRFGKGFQAEVPDWSGPINE 325

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BLAST of CSPI01G20570.1 vs. TrEMBL
Match: A0A061FRS6_THECC (RING/FYVE/PHD zinc finger superfamily protein, putative isoform 4 OS=Theobroma cacao GN=TCM_045436 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 2.5e-66
Identity = 159/370 (42.97%), Postives = 210/370 (56.76%), Query Frame = 1


Query: 1   MCPHCDEFSHDGCRKAGRIEEKKNSGGLRCLNFPRTFP---TVIMMPEGSKSNVVY-RRK 60
           M P CD  S   C++A             C   PRT     +V +M EG    +VY RRK
Sbjct: 39  MSPKCDVPSQSECKEAE----------YSCPPLPRTGSQQSSVSVMSEGPVPTLVYSRRK 98

Query: 61  KLRGSSDSRFLA-------------NGTDCISLISCDGNLAEDKEQAAASQHNHEREIVG 120
           K RGSS S   A                DC+S++S D       EQ   SQ  H     G
Sbjct: 99  KRRGSSSSASAAVANFCAEAPVNSKRSGDCLSVVSSDALSVAVMEQNGVSQVGHGNVATG 158

Query: 121 NAVPPFPVCDGKTQVSELESANGCIFGEGHGSDETPNNNLQKSLEVDSINDSCSSSKSNM 180
           + + P   C  +  +S+ E ANG    + HGSD+      QK+++VDSINDSCSSSKSNM
Sbjct: 159 DLLTPL-ACSREPHISKYEFANGFSGVDNHGSDDVRKTVRQKTIDVDSINDSCSSSKSNM 218

Query: 181 ELVSASLKVEVDDTGECSSSSIQVMGDAIEDISGRDLCISILRSNGLLSST--THAP-EE 240
           EL  AS+K E+D+ GEC SSS+       ED+S +D C SILR+ G +     + AP  E
Sbjct: 219 ELALASIKGEMDENGECCSSSVIAAEVVREDLSEKDRCFSILRNQGNVEEVGPSRAPLNE 278

Query: 241 ESDFRSDNNCFRLCKTCGSSESVLKMLICDHCEDAFHVSCCNHRMKRVSNDEWCCNSCLK 300
           E      ++C R+CK CG SE+  KMLICD+CE+AFH+ CCN R+K+V  DEW C SC+K
Sbjct: 279 EIGTSGASSCSRVCKICGRSETAQKMLICDNCEEAFHLRCCNPRIKKVPVDEWYCFSCMK 338

Query: 301 KNHKILKEAISKKLTNTSS-----RNGSSKGESNSIALMLKDTKPYTTCIRIGKGFQAEV 346
           K   ++K+  ++  ++ +      R  SS+GES+ I LML+D +PY T +RIGKGFQA+V
Sbjct: 339 KKRIMVKDTTARNSSSITGCMGRCRGVSSEGESSPIELMLRDAEPYRTSVRIGKGFQADV 397

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BLAST of CSPI01G20570.1 vs. TAIR10
Match: AT2G19260.1 (AT2G19260.1 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 89.0 bits (219), Expect = 6.6e-18
Identity = 70/199 (35.18%), Postives = 96/199 (48.24%), Query Frame = 1


Query: 144 QKSLEVDSINDSCSSSKSNMELVSASLKVEVDDTGECSSSSIQVMGDAIEDISGRDLCIS 203
           ++ L     N    S+ S+ EL+  +   EV     CSS        +++  S  +   S
Sbjct: 328 RRDLSETKKNGDQRSTVSSRELLDDTQVTEVT----CSSDGTNDSCSSLKSSSEVNSTSS 387

Query: 204 ILRSNGLLSSTTHAPEEESDFRSDNNCFRLCKTCGSSESVLKMLICDHCEDAFHVSCCNH 263
             R +   SS +   E ++D    ++ FR CK C    +V KMLICD CE+A+H  CC  
Sbjct: 388 KSREDDCYSSDSGVSETDTD--GSSSPFRQCKHCDKPGTVEKMLICDECEEAYHTRCCGV 447

Query: 264 RMKRVSN-DEWCCNSCLKKNHKILKEAISKKLTNTSSRNGSSKGESNSIALMLKDTKPYT 323
           +MK V+  DEW C SCLK               N SS+   +KG   S     + T P+ 
Sbjct: 448 QMKDVAEIDEWLCPSCLK---------------NQSSKT-KTKGRI-SHERKWRVTVPFV 503

Query: 324 TCIRIGKGFQAEVPDWSGP 342
             IRIGK FQA+VPDWSGP
Sbjct: 508 IGIRIGKMFQADVPDWSGP 503

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BLAST of CSPI01G20570.1 vs. TAIR10
Match: AT1G77250.1 (AT1G77250.1 RING/FYVE/PHD-type zinc finger family protein)

HSP 1 Score: 48.5 bits (114), Expect = 1.0e-05
Identity = 23/72 (31.94%), Postives = 38/72 (52.78%), Query Frame = 1


Query: 233 LCKTCGSSESVLKMLICDHCEDAFHVSCCNHRMKRVSNDEWCCNSCLKKNHKILK--EAI 292
           LC+ C + +   K+++CD C+DA+H+ C     + V N EW C +C     K+ K  +A 
Sbjct: 404 LCRNCLTDKDDDKIVLCDGCDDAYHIYCMRPPCESVPNGEWFCTACKAAILKVQKARKAF 463

Query: 293 SKKLTNTSSRNG 303
            KK+     + G
Sbjct: 464 EKKMETVQKQKG 475

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BLAST of CSPI01G20570.1 vs. NCBI nr
Match: gi|700210389|gb|KGN65485.1| (hypothetical protein Csa_1G425890 [Cucumis sativus])

HSP 1 Score: 703.7 bits (1815), Expect = 1.6e-199
Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 1


Query: 1   MCPHCDEFSHDGCRKAGRIEEKKNSGGLRCLNFPRTFPTVIMMPEGSKSNVVYRRKKLRG 60
           MCPHCDEFSHDGCRKAGRIEEKKNSGGLRCLNFPRTFPTVIMMPEGSKSNVVYRRKKLRG
Sbjct: 1   MCPHCDEFSHDGCRKAGRIEEKKNSGGLRCLNFPRTFPTVIMMPEGSKSNVVYRRKKLRG 60

Query: 61  SSDSRFLANGTDCISLISCDGNLAEDKEQAAASQHNHEREIVGNAVPPFPVCDGKTQVSE 120
           SSDSRFLANGTDCISLISCDGNLAEDKEQAAASQHNHEREIVGNAVPPFPVCDGKTQVSE
Sbjct: 61  SSDSRFLANGTDCISLISCDGNLAEDKEQAAASQHNHEREIVGNAVPPFPVCDGKTQVSE 120

Query: 121 LESANGCIFGEGHGSDETPNNNLQKSLEVDSINDSCSSSKSNMELVSASLKVEVDDTGEC 180
           LESANGCIFGEGHGSDETPNNNLQKSLEVDSINDSCSSSKSNMELVSASLKVEVDDTGEC
Sbjct: 121 LESANGCIFGEGHGSDETPNNNLQKSLEVDSINDSCSSSKSNMELVSASLKVEVDDTGEC 180

Query: 181 SSSSIQVMGDAIEDISGRDLCISILRSNGLLSSTTHAPEEESDFRSDNNCFRLCKTCGSS 240
           SSSSIQVMGDAIEDISGRDLCISILRSNGLLSSTTHAPEEESDFRSDNNCFRLCKTCGSS
Sbjct: 181 SSSSIQVMGDAIEDISGRDLCISILRSNGLLSSTTHAPEEESDFRSDNNCFRLCKTCGSS 240

Query: 241 ESVLKMLICDHCEDAFHVSCCNHRMKRVSNDEWCCNSCLKKNHKILKEAISKKLTNTSSR 300
           ESVLKMLICDHCEDAFHVSCCNHRMKRVSNDEWCCNSCLKKNHKILKEAISKKLTNTSSR
Sbjct: 241 ESVLKMLICDHCEDAFHVSCCNHRMKRVSNDEWCCNSCLKKNHKILKEAISKKLTNTSSR 300

Query: 301 NGSSKGESNSIALMLKDTKPYTTCIRIGKGFQAEVPDWSGPISE 345
           NGSSKGESNSIALMLKDTKPYTTCIRIGKGFQAEVPDWSGPISE
Sbjct: 301 NGSSKGESNSIALMLKDTKPYTTCIRIGKGFQAEVPDWSGPISE 344

[Close]

BLAST of CSPI01G20570.1 vs. NCBI nr
Match: gi|778660829|ref|XP_011656986.1| (PREDICTED: uncharacterized protein LOC101212408 isoform X1 [Cucumis sativus])

HSP 1 Score: 703.0 bits (1813), Expect = 2.8e-199
Identity = 343/345 (99.42%), Postives = 345/345 (100.00%), Query Frame = 1


Query: 1   MCPHCDEFSHDGCRKAGRIEEKKNSGGLRCLNFPRTFPTVIMMPEGSKSNVVYRRKKLRG 60
           MCPHCDEFSHDGCRKAGRIEEKKNSGGLRCLNFPRTFPTVIMMPEGSKSNVVYRRKKLRG
Sbjct: 1   MCPHCDEFSHDGCRKAGRIEEKKNSGGLRCLNFPRTFPTVIMMPEGSKSNVVYRRKKLRG 60

Query: 61  SSDSRFLANGTDCISLISCDGNLAEDKEQAAASQHNHEREIVGNAVPPFPVCDGKTQVSE 120
           SSDSRFLANGTDCISLISCDGNLAEDKEQAAASQHNHEREIVGNAVPPFPVCDGKTQVSE
Sbjct: 61  SSDSRFLANGTDCISLISCDGNLAEDKEQAAASQHNHEREIVGNAVPPFPVCDGKTQVSE 120

Query: 121 LESANGCIFGEGHGSDETPNNNLQKSLEVDSINDSCSSSKSNMELVSASLKVEVDDTGEC 180
           LESANGCIFGEGHGSDETPNNNLQKSLEVDSINDSCSSSKSNMELVSASLKVEVDDTGEC
Sbjct: 121 LESANGCIFGEGHGSDETPNNNLQKSLEVDSINDSCSSSKSNMELVSASLKVEVDDTGEC 180

Query: 181 SSSSIQVMGDAIEDISGRDLCISILRSNGLLSSTTHAPEEESDFRSDNNCFRLCKTCGSS 240
           SSSSIQVMGDAIEDISGRDLCISILRSNGLLSSTTHAPEEESDFRSDNNCFRLCKTCGSS
Sbjct: 181 SSSSIQVMGDAIEDISGRDLCISILRSNGLLSSTTHAPEEESDFRSDNNCFRLCKTCGSS 240

Query: 241 ESVLKMLICDHCEDAFHVSCCNHRMKRVSNDEWCCNSCLKKNHKILKEAISKKLTNTSSR 300
           ESVLKMLICDHCEDAFHVSCCNHRMKRVSNDEWCCNSCLKKNHKILKEAISKKLTNTSSR
Sbjct: 241 ESVLKMLICDHCEDAFHVSCCNHRMKRVSNDEWCCNSCLKKNHKILKEAISKKLTNTSSR 300

Query: 301 NGSSKGESNSIALMLKDTKPYTTCIRIGKGFQAEVPDWSGPISEN 346
           NGSSKGESNSIALMLKDTKPYTTCIRIGKGFQAEVPDWSGPIS++
Sbjct: 301 NGSSKGESNSIALMLKDTKPYTTCIRIGKGFQAEVPDWSGPISDD 345

[Close]

BLAST of CSPI01G20570.1 vs. NCBI nr
Match: gi|778660832|ref|XP_011656989.1| (PREDICTED: uncharacterized protein LOC101212408 isoform X2 [Cucumis sativus])

HSP 1 Score: 703.0 bits (1813), Expect = 2.8e-199
Identity = 343/345 (99.42%), Postives = 345/345 (100.00%), Query Frame = 1


Query: 1   MCPHCDEFSHDGCRKAGRIEEKKNSGGLRCLNFPRTFPTVIMMPEGSKSNVVYRRKKLRG 60
           MCPHCDEFSHDGCRKAGRIEEKKNSGGLRCLNFPRTFPTVIMMPEGSKSNVVYRRKKLRG
Sbjct: 1   MCPHCDEFSHDGCRKAGRIEEKKNSGGLRCLNFPRTFPTVIMMPEGSKSNVVYRRKKLRG 60

Query: 61  SSDSRFLANGTDCISLISCDGNLAEDKEQAAASQHNHEREIVGNAVPPFPVCDGKTQVSE 120
           SSDSRFLANGTDCISLISCDGNLAEDKEQAAASQHNHEREIVGNAVPPFPVCDGKTQVSE
Sbjct: 61  SSDSRFLANGTDCISLISCDGNLAEDKEQAAASQHNHEREIVGNAVPPFPVCDGKTQVSE 120

Query: 121 LESANGCIFGEGHGSDETPNNNLQKSLEVDSINDSCSSSKSNMELVSASLKVEVDDTGEC 180
           LESANGCIFGEGHGSDETPNNNLQKSLEVDSINDSCSSSKSNMELVSASLKVEVDDTGEC
Sbjct: 121 LESANGCIFGEGHGSDETPNNNLQKSLEVDSINDSCSSSKSNMELVSASLKVEVDDTGEC 180

Query: 181 SSSSIQVMGDAIEDISGRDLCISILRSNGLLSSTTHAPEEESDFRSDNNCFRLCKTCGSS 240
           SSSSIQVMGDAIEDISGRDLCISILRSNGLLSSTTHAPEEESDFRSDNNCFRLCKTCGSS
Sbjct: 181 SSSSIQVMGDAIEDISGRDLCISILRSNGLLSSTTHAPEEESDFRSDNNCFRLCKTCGSS 240

Query: 241 ESVLKMLICDHCEDAFHVSCCNHRMKRVSNDEWCCNSCLKKNHKILKEAISKKLTNTSSR 300
           ESVLKMLICDHCEDAFHVSCCNHRMKRVSNDEWCCNSCLKKNHKILKEAISKKLTNTSSR
Sbjct: 241 ESVLKMLICDHCEDAFHVSCCNHRMKRVSNDEWCCNSCLKKNHKILKEAISKKLTNTSSR 300

Query: 301 NGSSKGESNSIALMLKDTKPYTTCIRIGKGFQAEVPDWSGPISEN 346
           NGSSKGESNSIALMLKDTKPYTTCIRIGKGFQAEVPDWSGPIS++
Sbjct: 301 NGSSKGESNSIALMLKDTKPYTTCIRIGKGFQAEVPDWSGPISDD 345

[Close]

BLAST of CSPI01G20570.1 vs. NCBI nr
Match: gi|659107176|ref|XP_008453560.1| (PREDICTED: uncharacterized protein LOC103494237 isoform X2 [Cucumis melo])

HSP 1 Score: 650.6 bits (1677), Expect = 1.6e-183
Identity = 320/346 (92.49%), Postives = 329/346 (95.09%), Query Frame = 1


Query: 1   MCPHCDEFSHDGCRKAGRI-EEKKNSGGLRCLNFPRTFPTVIMMPEGSKSNVVYRRKKLR 60
           MCPHCDEFSHDGCRKAG I EEKKN+GGLRCLNFPRTFPT IMM EGSKSNVVYRRKKLR
Sbjct: 1   MCPHCDEFSHDGCRKAGPIIEEKKNNGGLRCLNFPRTFPTAIMMSEGSKSNVVYRRKKLR 60

Query: 61  GSSDSRFLANGTDCISLISCDGNLAEDKEQAAASQHNHEREIVGNAVPPFPVCDGKTQVS 120
           GSSDSRFLANGTDCISLISCDG+LAEDKEQAAASQ NHE EIVGNAVPPFPVCDGKTQVS
Sbjct: 61  GSSDSRFLANGTDCISLISCDGHLAEDKEQAAASQRNHEHEIVGNAVPPFPVCDGKTQVS 120

Query: 121 ELESANGCIFGEGHGSDETPNNNLQKSLEVDSINDSCSSSKSNMELVSASLKVEVDDTGE 180
           ELESANGCIFGEGHGSDETPNNNLQKSLEVDSINDSCSSSKSNMELVS SLKVEVDDTGE
Sbjct: 121 ELESANGCIFGEGHGSDETPNNNLQKSLEVDSINDSCSSSKSNMELVSTSLKVEVDDTGE 180

Query: 181 CSSSSIQVMGDAIEDISGRDLCISILRSNGLLSSTTHAPEEESDFRSDNNCFRLCKTCGS 240
           CSSSSIQVM D +EDISGRDLCISILRSNGLLSS  H PEEESD RSDNNCFRLCKTCGS
Sbjct: 181 CSSSSIQVMEDTVEDISGRDLCISILRSNGLLSSMAHVPEEESDSRSDNNCFRLCKTCGS 240

Query: 241 SESVLKMLICDHCEDAFHVSCCNHRMKRVSNDEWCCNSCLKKNHKILKEAISKKLTNTSS 300
           SESVLKMLICDHCEDAFHVSCCNHRMK+VSNDEW CNSCLKK HK+LKEAISKKLTNT S
Sbjct: 241 SESVLKMLICDHCEDAFHVSCCNHRMKKVSNDEWYCNSCLKKKHKVLKEAISKKLTNTLS 300

Query: 301 RNGSSKGESNSIALMLKDTKPYTTCIRIGKGFQAEVPDWSGPISEN 346
           RNGSSKGESNSIALMLKDT+PYTT +RIGKGFQAEVPDWSGPIS++
Sbjct: 301 RNGSSKGESNSIALMLKDTEPYTTGVRIGKGFQAEVPDWSGPISDD 346

[Close]

BLAST of CSPI01G20570.1 vs. NCBI nr
Match: gi|659107172|ref|XP_008453557.1| (PREDICTED: uncharacterized protein LOC103494237 isoform X1 [Cucumis melo])

HSP 1 Score: 650.6 bits (1677), Expect = 1.6e-183
Identity = 320/346 (92.49%), Postives = 329/346 (95.09%), Query Frame = 1


Query: 1   MCPHCDEFSHDGCRKAGRI-EEKKNSGGLRCLNFPRTFPTVIMMPEGSKSNVVYRRKKLR 60
           MCPHCDEFSHDGCRKAG I EEKKN+GGLRCLNFPRTFPT IMM EGSKSNVVYRRKKLR
Sbjct: 1   MCPHCDEFSHDGCRKAGPIIEEKKNNGGLRCLNFPRTFPTAIMMSEGSKSNVVYRRKKLR 60

Query: 61  GSSDSRFLANGTDCISLISCDGNLAEDKEQAAASQHNHEREIVGNAVPPFPVCDGKTQVS 120
           GSSDSRFLANGTDCISLISCDG+LAEDKEQAAASQ NHE EIVGNAVPPFPVCDGKTQVS
Sbjct: 61  GSSDSRFLANGTDCISLISCDGHLAEDKEQAAASQRNHEHEIVGNAVPPFPVCDGKTQVS 120

Query: 121 ELESANGCIFGEGHGSDETPNNNLQKSLEVDSINDSCSSSKSNMELVSASLKVEVDDTGE 180
           ELESANGCIFGEGHGSDETPNNNLQKSLEVDSINDSCSSSKSNMELVS SLKVEVDDTGE
Sbjct: 121 ELESANGCIFGEGHGSDETPNNNLQKSLEVDSINDSCSSSKSNMELVSTSLKVEVDDTGE 180

Query: 181 CSSSSIQVMGDAIEDISGRDLCISILRSNGLLSSTTHAPEEESDFRSDNNCFRLCKTCGS 240
           CSSSSIQVM D +EDISGRDLCISILRSNGLLSS  H PEEESD RSDNNCFRLCKTCGS
Sbjct: 181 CSSSSIQVMEDTVEDISGRDLCISILRSNGLLSSMAHVPEEESDSRSDNNCFRLCKTCGS 240

Query: 241 SESVLKMLICDHCEDAFHVSCCNHRMKRVSNDEWCCNSCLKKNHKILKEAISKKLTNTSS 300
           SESVLKMLICDHCEDAFHVSCCNHRMK+VSNDEW CNSCLKK HK+LKEAISKKLTNT S
Sbjct: 241 SESVLKMLICDHCEDAFHVSCCNHRMKKVSNDEWYCNSCLKKKHKVLKEAISKKLTNTLS 300

Query: 301 RNGSSKGESNSIALMLKDTKPYTTCIRIGKGFQAEVPDWSGPISEN 346
           RNGSSKGESNSIALMLKDT+PYTT +RIGKGFQAEVPDWSGPIS++
Sbjct: 301 RNGSSKGESNSIALMLKDTEPYTTGVRIGKGFQAEVPDWSGPISDD 346

The following BLAST results are available for this feature:

BLAST of CSPI01G20570.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI01G20570.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LU88_CUCSA	1.1e-199	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G425890 PE=4 SV=1	[more]
F6I5N1_VITVI	3.4e-71	45.60	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0103g00660 PE=4 SV=...	[more]
B9SP83_RICCO	1.6e-68	44.15	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0594380 PE=4 SV=1	[more]
M5XUT5_PRUPE	1.1e-66	47.99	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa017202mg PE=4 S...	[more]
A0A061FRS6_THECC	2.5e-66	42.97	RING/FYVE/PHD zinc finger superfamily protein, putative isoform 4 OS=Theobroma c...	[more]

BLAST of CSPI01G20570.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G19260.1	6.6e-18	35.18	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT1G77250.1	1.0e-05	31.94	RING/FYVE/PHD-type zinc finger family protein	[more]

BLAST of CSPI01G20570.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700210389\|gb\|KGN65485.1\|	1.6e-199	100.00	hypothetical protein Csa_1G425890 [Cucumis sativus]	[more]
gi\|778660829\|ref\|XP_011656986.1\|	2.8e-199	99.42	PREDICTED: uncharacterized protein LOC101212408 isoform X1 [Cucumis sativus]	[more]
gi\|778660832\|ref\|XP_011656989.1\|	2.8e-199	99.42	PREDICTED: uncharacterized protein LOC101212408 isoform X2 [Cucumis sativus]	[more]
gi\|659107176\|ref\|XP_008453560.1\|	1.6e-183	92.49	PREDICTED: uncharacterized protein LOC103494237 isoform X2 [Cucumis melo]	[more]
gi\|659107172\|ref\|XP_008453557.1\|	1.6e-183	92.49	PREDICTED: uncharacterized protein LOC103494237 isoform X1 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001965	Znf_PHD
IPR011011	Znf_FYVE_PHD
IPR013083	Znf_RING/FYVE/PHD
IPR019786	Zinc_finger_PHD-type_CS
IPR019787	Znf_PHD-finger

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI01G20570	CSPI01G20570	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI01G20570.1	CSPI01G20570.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI01G20570.1.cds3	CSPI01G20570.1.cds3	CDS
CSPI01G20570.1.cds2	CSPI01G20570.1.cds2	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI01G20570.1.utr5p1	CSPI01G20570.1.utr5p1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001965	Zinc finger, PHD-type	SMART	SM00249	PHD_3	coord: 233..279 score: 4.
IPR011011	Zinc finger, FYVE/PHD-type	unknown	SSF57903	FYVE/PHD zinc finger	coord: 220..286 score: 3.09
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 219..291 score: 8.0
IPR019786	Zinc finger, PHD-type, conserved site	PROSITE	PS01359	ZF_PHD_1	coord: 234..278 scor
IPR019787	Zinc finger, PHD-finger	PFAM	PF00628	PHD	coord: 234..280 score: 6.
IPR019787	Zinc finger, PHD-finger	PROFILE	PS50016	ZF_PHD_2	coord: 231..281 score: 9
None	No IPR available	PANTHER	PTHR10615	HISTONE ACETYLTRANSFERASE	coord: 185..343 score: 6.5
None	No IPR available	PANTHER	PTHR10615:SF117	SUBFAMILY NOT NAMED	coord: 185..343 score: 6.5