CSPI01G20570 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATCATCAATTATTTTTGGTCATTTTGCCTTCTCTCTGTTTGTAACACTTTTGTATATTACAAAGAGAAAAAGAAAACGAAGCATAAACTTAGTGTAAATTTGTAATATGCAAAATGAGTGATCTACAAAGGCAAAGTGAAAAGTTTGCGTCTATTGAAGTCAGGGAACCCCCCCAATGAATCAAATTTGAGTTCATAAACACGGACGTTGTCTTTTCTTCAAATATATAAAAGAGAAAAAAGAGAAAAAAGAGAAATAAAAACGCATAATTTTGAATTAAGATGAATCTGGGATTCTGAGTGGTAAAGGAGCAGAAAGGAAAGCATATTTTTTTTTCCACAACTGGGTTGATCATTCGGAAGAACTGGCTGATTGTACGCTTCTTTTGGTTAGTTTAATCTTTCCTTCTCTACTCTAAGAATCGGGAACAGAGTATAGCATGATGTTGTTCAACTTTTTTGCCCATTTTTCAATTGTTGGTTGCTTGTTTTTAAACTTCATTTGTTATTTGAATGGATTCTTTAGCAGTATTTGAGTATATAACTGATTGACTTAAGAGGTATTAGTGTGGAAAATATGGTCTGCTATGATGGATTTTTCTGATGTGGTTGTGGCAGTCGACGAAAACTTTAGAATTACATGCGTAGATTGTTTTTTTATTTAATGGGTTGTGATTTAAAGTGGAAGGTTTGTGTAGGAGGATGAGATAAATTGGGATAATATTTTTTTCTCTAAGTTGCTCGATAATGTGAAGTTGGATGGACGGTTATTATTATTTGACTGGGAAAATTTAGGGTTCAATCTTTTGGAGTTGGGGAGATTGGGACTGAGTAGATAGATTTTGGTGAGTTCCAGGGTGAGATTTTGTCCGTGATTTCTTGGTTTGCCATCGTGTCATTGGCTATGTCAACTTGAAGGGTTTCCAATCAGGAGGGAGATTGATACATTAATGGAGTTATATTCGATTCTTTTTTTTCTTTCAGAAAACTAAAAGAAATCTTTGAGAACCTGTTGATGGATTATAGATTTACGTGAGATCTGCAGTTCAATTTCTTAAGAGAGGCATGTTGCTTTTTGTCTATCCGAGATAATATGCTGATAGAAAATGATCGGATGTGCTCCACTGCTCTAGAAAAACTTCCCTGTTTTCTACTTAATGTCTTATGTCGTGCTTGCTCTTGAAATTCACAGATGTGCCCCCATTGTGATGAATTCTCTCATGATGGCTGCAGAAAAGCTGGACGCATTGAGGAAAAGAAGAACAGTGGTGGATTGCGTTGCTTAAATTTTCCTAGGACCTTTCCAACTGTCATTATGATGCCTGAAGGTTCAAAATCTAATGTAGTATATAGGAGAAAGAAACTGCGGGGCAGTTCTGATTCCAGGTTTTTGGCTAATGGGACAGATTGTATATCTTTGATTAGTTGTGATGGTAATTTGGCAGAAGACAAAGAGCAAGCTGCAGCTTCTCAACATAACCACGAGCGTGAAATTGTTGGAAATGCTGTCCCTCCTTTTCCTGTTTGTGATGGGAAAACTCAAGTTTCAGAACTAGAATCAGCCAATGGTTGTATCTTTGGGGAAGGGCATGGTTCAGACGAAACACCTAACAATAACTTGCAAAAAAGTTTGGAGGTTGACAGCATTAATGATAGCTGCTCCTCATCTAAGTCAAACATGGAACTTGTTTCAGCTTCCCTGAAAGTTGAAGTGGATGACACAGGTGAGTGCTCCTCTTCTAGCATTCAAGTTATGGGGGATGCGATCGAGGATATTTCTGGAAGAGATCTATGCATCTCTATACTTAGAAGCAATGGGCTGTTGTCTTCTACGACTCATGCTCCTGAGGAAGAAAGTGATTTTAGAAGTGACAATAACTGTTTTCGATTGTGCAAAACTTGTGGCTCTTCAGAATCAGTCTTGAAGATGTTAATCTGTGATCATTGCGAGGATGCATTTCATGTCTCATGTTGCAATCATCGCATGAAGAGAGTGTCAAATGATGAGTGGTGTTGCAATTCATGTCTGAAAAAAAATCACAAAATTTTGAAGGAAGCAATCTCAAAGAAATTGACAAACACCTCGAGTAGAAATGGATCTTCTAAGGGTGAATCAAATTCTATAGCATTAATGTTGAAGGACACAAAACCTTATACAACTTGTATTCGGATTGGCAAAGGTTTTCAAGCAGAAGTTCCAGATTGGTCTGGCCCGATTTCAGAGTATGTTATTTTCTTTAACTATATGTATATTTTCTTCATGCAAACTTAAAATTAATGGTTTTATTAGGTAATTCATTCTTTGGGGGAAGTTGATTCCGCCCCCCACCCCTCACCCCCTGGTTTAGAAACAAAACTGAGGTATTGCCTACTCATGTTATTGACCATTATCCGAACTTTTAA ATGTGCCCCCATTGTGATGAATTCTCTCATGATGGCTGCAGAAAAGCTGGACGCATTGAGGAAAAGAAGAACAGTGGTGGATTGCGTTGCTTAAATTTTCCTAGGACCTTTCCAACTGTCATTATGATGCCTGAAGGTTCAAAATCTAATGTAGTATATAGGAGAAAGAAACTGCGGGGCAGTTCTGATTCCAGGTTTTTGGCTAATGGGACAGATTGTATATCTTTGATTAGTTGTGATGGTAATTTGGCAGAAGACAAAGAGCAAGCTGCAGCTTCTCAACATAACCACGAGCGTGAAATTGTTGGAAATGCTGTCCCTCCTTTTCCTGTTTGTGATGGGAAAACTCAAGTTTCAGAACTAGAATCAGCCAATGGTTGTATCTTTGGGGAAGGGCATGGTTCAGACGAAACACCTAACAATAACTTGCAAAAAAGTTTGGAGGTTGACAGCATTAATGATAGCTGCTCCTCATCTAAGTCAAACATGGAACTTGTTTCAGCTTCCCTGAAAGTTGAAGTGGATGACACAGGTGAGTGCTCCTCTTCTAGCATTCAAGTTATGGGGGATGCGATCGAGGATATTTCTGGAAGAGATCTATGCATCTCTATACTTAGAAGCAATGGGCTGTTGTCTTCTACGACTCATGCTCCTGAGGAAGAAAGTGATTTTAGAAGTGACAATAACTGTTTTCGATTGTGCAAAACTTGTGGCTCTTCAGAATCAGTCTTGAAGATGTTAATCTGTGATCATTGCGAGGATGCATTTCATGTCTCATGTTGCAATCATCGCATGAAGAGAGTGTCAAATGATGAGTGGTGTTGCAATTCATGTCTGAAAAAAAATCACAAAATTTTGAAGGAAGCAATCTCAAAGAAATTGACAAACACCTCGAGTAGAAATGGATCTTCTAAGGGTGAATCAAATTCTATAGCATTAATGTTGAAGGACACAAAACCTTATACAACTTGTATTCGGATTGGCAAAGGTTTTCAAGCAGAAGTTCCAGATTGGTCTGGCCCGATTTCAGAAAACAAAACTGAGGTATTGCCTACTCATGTTATTGACCATTATCCGAACTTTTAA ATGTGCCCCCATTGTGATGAATTCTCTCATGATGGCTGCAGAAAAGCTGGACGCATTGAGGAAAAGAAGAACAGTGGTGGATTGCGTTGCTTAAATTTTCCTAGGACCTTTCCAACTGTCATTATGATGCCTGAAGGTTCAAAATCTAATGTAGTATATAGGAGAAAGAAACTGCGGGGCAGTTCTGATTCCAGGTTTTTGGCTAATGGGACAGATTGTATATCTTTGATTAGTTGTGATGGTAATTTGGCAGAAGACAAAGAGCAAGCTGCAGCTTCTCAACATAACCACGAGCGTGAAATTGTTGGAAATGCTGTCCCTCCTTTTCCTGTTTGTGATGGGAAAACTCAAGTTTCAGAACTAGAATCAGCCAATGGTTGTATCTTTGGGGAAGGGCATGGTTCAGACGAAACACCTAACAATAACTTGCAAAAAAGTTTGGAGGTTGACAGCATTAATGATAGCTGCTCCTCATCTAAGTCAAACATGGAACTTGTTTCAGCTTCCCTGAAAGTTGAAGTGGATGACACAGGTGAGTGCTCCTCTTCTAGCATTCAAGTTATGGGGGATGCGATCGAGGATATTTCTGGAAGAGATCTATGCATCTCTATACTTAGAAGCAATGGGCTGTTGTCTTCTACGACTCATGCTCCTGAGGAAGAAAGTGATTTTAGAAGTGACAATAACTGTTTTCGATTGTGCAAAACTTGTGGCTCTTCAGAATCAGTCTTGAAGATGTTAATCTGTGATCATTGCGAGGATGCATTTCATGTCTCATGTTGCAATCATCGCATGAAGAGAGTGTCAAATGATGAGTGGTGTTGCAATTCATGTCTGAAAAAAAATCACAAAATTTTGAAGGAAGCAATCTCAAAGAAATTGACAAACACCTCGAGTAGAAATGGATCTTCTAAGGGTGAATCAAATTCTATAGCATTAATGTTGAAGGACACAAAACCTTATACAACTTGTATTCGGATTGGCAAAGGTTTTCAAGCAGAAGTTCCAGATTGGTCTGGCCCGATTTCAGAAAACAAAACTGAGGTATTGCCTACTCATGTTATTGACCATTATCCGAACTTTTAA
BLAST of CSPI01G20570 vs. TrEMBL
Match: A0A0A0LU88_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G425890 PE=4 SV=1) HSP 1 Score: 703.7 bits (1815), Expect = 1.1e-199 Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 1
BLAST of CSPI01G20570 vs. TrEMBL
Match: F6I5N1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0103g00660 PE=4 SV=1) HSP 1 Score: 276.9 bits (707), Expect = 3.4e-71 Identity = 166/364 (45.60%), Postives = 214/364 (58.79%), Query Frame = 1
BLAST of CSPI01G20570 vs. TrEMBL
Match: B9SP83_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0594380 PE=4 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 1.6e-68 Identity = 166/376 (44.15%), Postives = 217/376 (57.71%), Query Frame = 1
BLAST of CSPI01G20570 vs. TrEMBL
Match: M5XUT5_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa017202mg PE=4 SV=1) HSP 1 Score: 261.9 bits (668), Expect = 1.1e-66 Identity = 155/323 (47.99%), Postives = 208/323 (64.40%), Query Frame = 1
BLAST of CSPI01G20570 vs. TrEMBL
Match: A0A061FRS6_THECC (RING/FYVE/PHD zinc finger superfamily protein, putative isoform 4 OS=Theobroma cacao GN=TCM_045436 PE=4 SV=1) HSP 1 Score: 260.8 bits (665), Expect = 2.5e-66 Identity = 159/370 (42.97%), Postives = 210/370 (56.76%), Query Frame = 1
BLAST of CSPI01G20570 vs. TAIR10
Match: AT2G19260.1 (AT2G19260.1 RING/FYVE/PHD zinc finger superfamily protein) HSP 1 Score: 89.0 bits (219), Expect = 6.6e-18 Identity = 70/199 (35.18%), Postives = 96/199 (48.24%), Query Frame = 1
BLAST of CSPI01G20570 vs. TAIR10
Match: AT1G77250.1 (AT1G77250.1 RING/FYVE/PHD-type zinc finger family protein) HSP 1 Score: 48.5 bits (114), Expect = 1.0e-05 Identity = 23/72 (31.94%), Postives = 38/72 (52.78%), Query Frame = 1
BLAST of CSPI01G20570 vs. NCBI nr
Match: gi|700210389|gb|KGN65485.1| (hypothetical protein Csa_1G425890 [Cucumis sativus]) HSP 1 Score: 703.7 bits (1815), Expect = 1.6e-199 Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 1
BLAST of CSPI01G20570 vs. NCBI nr
Match: gi|778660829|ref|XP_011656986.1| (PREDICTED: uncharacterized protein LOC101212408 isoform X1 [Cucumis sativus]) HSP 1 Score: 703.0 bits (1813), Expect = 2.8e-199 Identity = 343/345 (99.42%), Postives = 345/345 (100.00%), Query Frame = 1
BLAST of CSPI01G20570 vs. NCBI nr
Match: gi|778660832|ref|XP_011656989.1| (PREDICTED: uncharacterized protein LOC101212408 isoform X2 [Cucumis sativus]) HSP 1 Score: 703.0 bits (1813), Expect = 2.8e-199 Identity = 343/345 (99.42%), Postives = 345/345 (100.00%), Query Frame = 1
BLAST of CSPI01G20570 vs. NCBI nr
Match: gi|659107176|ref|XP_008453560.1| (PREDICTED: uncharacterized protein LOC103494237 isoform X2 [Cucumis melo]) HSP 1 Score: 650.6 bits (1677), Expect = 1.6e-183 Identity = 320/346 (92.49%), Postives = 329/346 (95.09%), Query Frame = 1
BLAST of CSPI01G20570 vs. NCBI nr
Match: gi|659107172|ref|XP_008453557.1| (PREDICTED: uncharacterized protein LOC103494237 isoform X1 [Cucumis melo]) HSP 1 Score: 650.6 bits (1677), Expect = 1.6e-183 Identity = 320/346 (92.49%), Postives = 329/346 (95.09%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |