CSPI01G18390.1 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTAATTTCAGGACCAAAACAACCAGGGGATGACATAGGCATATACTTAGCACCACTAATTGAAGATTTAAAACTTTTATGGGAAAGTGGTGTTGAATGTTATGATGCTTATCGAGAAGAACCATTCAACTTAAGGTCAGTTTTGTTGTGGACAATCAATGATTTTCCTGCATATGGTAACCTTAGTGGATGTTGTGTGAAAGGGTATAAAGCATGCCCAATTTGTGGAGATAATACAAATTCTATAAGGTTAAAGTATGGGAAGAAAATGGCATACCTTGGACATCGTAGATTTTTGGCACGAAATCATCTGTATCGACGACAAAAGAAGTCATTCAATGGTAAAAAAGAACTTGATACAATTCCAGAGCCACTTTCTGGGGAGGATGTGTATTTAAAATTGAAAGATCTTGAATTTTCTAGAGGGAAGAAGAACCATAAGAAACGGTTGATGAACAGAAGTGACAAAATTTGTTGGAATAGATTATCTTCTTTTTTTGAGTTGCCATACTGGAAGGATCTTCATGTTAGACATTGTTTAGATGTGATGCACATTGAAAAAAATGTTTGCATGAATATCTTAGATACATTTCTTGATATTCCTGGAAAAAGTAAGGATGGATTGAATGCTAGACGCGATTTAGTTGATCTAAAACTTCGACCAGAGCTTGCCCCTATCAGAATATGTTACTCCTACCAATTACTTTCATTATGTAAAAAAGACATCTAAACGTGAGGATGAGATTATACTTGAGAATAAAGAACTTCGAAGGCGTGTAAGCGAATTAGAAGCACATAACCACTCAAACTTGTCTAGACCATTATCTGGACATGGTAGCTGTTCGAAGCCAAATATCTTAGAAGAGAGTGACTCGATGAAAATAATCAAAGGGAAGAGTAAGTTGATGGATAAAATCGAAGGGAAAGAGGTGGAGGAGATCAATGTAAATGACGACAAAGTAGAGTTGGACATCTTTCATTGA ATGCTAATTTCAGGACCAAAACAACCAGGGGATGACATAGGCATATACTTAGCACCACTAATTGAAGATTTAAAACTTTTATGGGAAAGTGGTGTTGAATGTTATGATGCTTATCGAGAAGAACCATTCAACTTAAGGTCAGTTTTGTTGTGGACAATCAATGATTTTCCTGCATATGGTAACCTTAGTGGATGTTGTGTGAAAGGGTATAAAGCATGCCCAATTTGTGGAGATAATACAAATTCTATAAGGTTAAAGTATGGGAAGAAAATGGCATACCTTGGACATCGTAGATTTTTGGCACGAAATCATCTGTATCGACGACAAAAGAAGTCATTCAATGGTAAAAAAGAACTTGATACAATTCCAGAGCCACTTTCTGGGGAGGATGTGTATTTAAAATTGAAAGATCTTGAATTTTCTAGAGGGAAGAAGAACCATAAGAAACGGTTGATGAACAGAAGTGACAAAATTTGTTGGAATAGATTATCTTCTTTTTTTGAGTTGCCATACTGGAAGGATCTTCATAGCTTGCCCCTATCAGAATATGTTACTCCTACCAATTACTTTCATTATGTAAAAAAGACATCTAAACGTGAGGATGAGATTATACTTGAGAATAAAGAACTTCGAAGGCGTGTAAGCGAATTAGAAGCACATAACCACTCAAACTTGTCTAGACCATTATCTGGACATGGTAGCTGTTCGAAGCCAAATATCTTAGAAGAGAGTGACTCGATGAAAATAATCAAAGGGAAGAGTAAGTTGATGGATAAAATCGAAGGGAAAGAGGTGGAGGAGATCAATGTAAATGACGACAAAGTAGAGTTGGACATCTTTCATTGA ATGCTAATTTCAGGACCAAAACAACCAGGGGATGACATAGGCATATACTTAGCACCACTAATTGAAGATTTAAAACTTTTATGGGAAAGTGGTGTTGAATGTTATGATGCTTATCGAGAAGAACCATTCAACTTAAGGTCAGTTTTGTTGTGGACAATCAATGATTTTCCTGCATATGGTAACCTTAGTGGATGTTGTGTGAAAGGGTATAAAGCATGCCCAATTTGTGGAGATAATACAAATTCTATAAGGTTAAAGTATGGGAAGAAAATGGCATACCTTGGACATCGTAGATTTTTGGCACGAAATCATCTGTATCGACGACAAAAGAAGTCATTCAATGGTAAAAAAGAACTTGATACAATTCCAGAGCCACTTTCTGGGGAGGATGTGTATTTAAAATTGAAAGATCTTGAATTTTCTAGAGGGAAGAAGAACCATAAGAAACGGTTGATGAACAGAAGTGACAAAATTTGTTGGAATAGATTATCTTCTTTTTTTGAGTTGCCATACTGGAAGGATCTTCATAGCTTGCCCCTATCAGAATATGTTACTCCTACCAATTACTTTCATTATGTAAAAAAGACATCTAAACGTGAGGATGAGATTATACTTGAGAATAAAGAACTTCGAAGGCGTGTAAGCGAATTAGAAGCACATAACCACTCAAACTTGTCTAGACCATTATCTGGACATGGTAGCTGTTCGAAGCCAAATATCTTAGAAGAGAGTGACTCGATGAAAATAATCAAAGGGAAGAGTAAGTTGATGGATAAAATCGAAGGGAAAGAGGTGGAGGAGATCAATGTAAATGACGACAAAGTAGAGTTGGACATCTTTCATTGA
BLAST of CSPI01G18390.1 vs. TrEMBL
Match: A0A0K9JUY8_9BURK (Uncharacterized protein OS=Candidatus Burkholderia humilis GN=BHUM_05676c PE=4 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 4.0e-59 Identity = 103/176 (58.52%), Postives = 136/176 (77.27%), Query Frame = 1
BLAST of CSPI01G18390.1 vs. TrEMBL
Match: A5AWJ4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004106 PE=4 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 4.0e-59 Identity = 106/176 (60.23%), Postives = 137/176 (77.84%), Query Frame = 1
BLAST of CSPI01G18390.1 vs. TrEMBL
Match: A5BIL3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034073 PE=4 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 4.8e-57 Identity = 108/176 (61.36%), Postives = 132/176 (75.00%), Query Frame = 1
BLAST of CSPI01G18390.1 vs. TrEMBL
Match: A5B258_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021512 PE=4 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 3.1e-56 Identity = 103/176 (58.52%), Postives = 134/176 (76.14%), Query Frame = 1
BLAST of CSPI01G18390.1 vs. TrEMBL
Match: A5AWV0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018163 PE=4 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 1.1e-53 Identity = 105/176 (59.66%), Postives = 132/176 (75.00%), Query Frame = 1
BLAST of CSPI01G18390.1 vs. NCBI nr
Match: gi|659129657|ref|XP_008464776.1| (PREDICTED: uncharacterized protein LOC103502584 [Cucumis melo]) HSP 1 Score: 240.7 bits (613), Expect = 3.0e-60 Identity = 112/176 (63.64%), Postives = 137/176 (77.84%), Query Frame = 1
BLAST of CSPI01G18390.1 vs. NCBI nr
Match: gi|147787846|emb|CAN71753.1| (hypothetical protein VITISV_004106 [Vitis vinifera]) HSP 1 Score: 236.5 bits (602), Expect = 5.7e-59 Identity = 106/176 (60.23%), Postives = 137/176 (77.84%), Query Frame = 1
BLAST of CSPI01G18390.1 vs. NCBI nr
Match: gi|900952032|gb|KMZ11551.1| (hypothetical protein BHUM_05676c [Candidatus Burkholderia humilis]) HSP 1 Score: 236.5 bits (602), Expect = 5.7e-59 Identity = 103/176 (58.52%), Postives = 136/176 (77.27%), Query Frame = 1
BLAST of CSPI01G18390.1 vs. NCBI nr
Match: gi|659125772|ref|XP_008462854.1| (PREDICTED: uncharacterized protein LOC103501133 [Cucumis melo]) HSP 1 Score: 233.8 bits (595), Expect = 3.7e-58 Identity = 110/176 (62.50%), Postives = 136/176 (77.27%), Query Frame = 1
BLAST of CSPI01G18390.1 vs. NCBI nr
Match: gi|659090010|ref|XP_008445784.1| (PREDICTED: uncharacterized protein LOC103488708 [Cucumis melo]) HSP 1 Score: 233.8 bits (595), Expect = 3.7e-58 Identity = 109/176 (61.93%), Postives = 136/176 (77.27%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
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