CSPI01G18390 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G18390
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionTransposon protein, putative, CACTA, En/Spm sub-class
LocationChr1 : 13808161 .. 13809145 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTAATTTCAGGACCAAAACAACCAGGGGATGACATAGGCATATACTTAGCACCACTAATTGAAGATTTAAAACTTTTATGGGAAAGTGGTGTTGAATGTTATGATGCTTATCGAGAAGAACCATTCAACTTAAGGTCAGTTTTGTTGTGGACAATCAATGATTTTCCTGCATATGGTAACCTTAGTGGATGTTGTGTGAAAGGGTATAAAGCATGCCCAATTTGTGGAGATAATACAAATTCTATAAGGTTAAAGTATGGGAAGAAAATGGCATACCTTGGACATCGTAGATTTTTGGCACGAAATCATCTGTATCGACGACAAAAGAAGTCATTCAATGGTAAAAAAGAACTTGATACAATTCCAGAGCCACTTTCTGGGGAGGATGTGTATTTAAAATTGAAAGATCTTGAATTTTCTAGAGGGAAGAAGAACCATAAGAAACGGTTGATGAACAGAAGTGACAAAATTTGTTGGAATAGATTATCTTCTTTTTTTGAGTTGCCATACTGGAAGGATCTTCATGTTAGACATTGTTTAGATGTGATGCACATTGAAAAAAATGTTTGCATGAATATCTTAGATACATTTCTTGATATTCCTGGAAAAAGTAAGGATGGATTGAATGCTAGACGCGATTTAGTTGATCTAAAACTTCGACCAGAGCTTGCCCCTATCAGAATATGTTACTCCTACCAATTACTTTCATTATGTAAAAAAGACATCTAAACGTGAGGATGAGATTATACTTGAGAATAAAGAACTTCGAAGGCGTGTAAGCGAATTAGAAGCACATAACCACTCAAACTTGTCTAGACCATTATCTGGACATGGTAGCTGTTCGAAGCCAAATATCTTAGAAGAGAGTGACTCGATGAAAATAATCAAAGGGAAGAGTAAGTTGATGGATAAAATCGAAGGGAAAGAGGTGGAGGAGATCAATGTAAATGACGACAAAGTAGAGTTGGACATCTTTCATTGA

mRNA sequence

ATGCTAATTTCAGGACCAAAACAACCAGGGGATGACATAGGCATATACTTAGCACCACTAATTGAAGATTTAAAACTTTTATGGGAAAGTGGTGTTGAATGTTATGATGCTTATCGAGAAGAACCATTCAACTTAAGGTCAGTTTTGTTGTGGACAATCAATGATTTTCCTGCATATGGTAACCTTAGTGGATGTTGTGTGAAAGGGTATAAAGCATGCCCAATTTGTGGAGATAATACAAATTCTATAAGGTTAAAGTATGGGAAGAAAATGGCATACCTTGGACATCGTAGATTTTTGGCACGAAATCATCTGTATCGACGACAAAAGAAGTCATTCAATGGTAAAAAAGAACTTGATACAATTCCAGAGCCACTTTCTGGGGAGGATGTGTATTTAAAATTGAAAGATCTTGAATTTTCTAGAGGGAAGAAGAACCATAAGAAACGGTTGATGAACAGAAGTGACAAAATTTGTTGGAATAGATTATCTTCTTTTTTTGAGTTGCCATACTGGAAGGATCTTCATAGCTTGCCCCTATCAGAATATGTTACTCCTACCAATTACTTTCATTATGTAAAAAAGACATCTAAACGTGAGGATGAGATTATACTTGAGAATAAAGAACTTCGAAGGCGTGTAAGCGAATTAGAAGCACATAACCACTCAAACTTGTCTAGACCATTATCTGGACATGGTAGCTGTTCGAAGCCAAATATCTTAGAAGAGAGTGACTCGATGAAAATAATCAAAGGGAAGAGTAAGTTGATGGATAAAATCGAAGGGAAAGAGGTGGAGGAGATCAATGTAAATGACGACAAAGTAGAGTTGGACATCTTTCATTGA

Coding sequence (CDS)

ATGCTAATTTCAGGACCAAAACAACCAGGGGATGACATAGGCATATACTTAGCACCACTAATTGAAGATTTAAAACTTTTATGGGAAAGTGGTGTTGAATGTTATGATGCTTATCGAGAAGAACCATTCAACTTAAGGTCAGTTTTGTTGTGGACAATCAATGATTTTCCTGCATATGGTAACCTTAGTGGATGTTGTGTGAAAGGGTATAAAGCATGCCCAATTTGTGGAGATAATACAAATTCTATAAGGTTAAAGTATGGGAAGAAAATGGCATACCTTGGACATCGTAGATTTTTGGCACGAAATCATCTGTATCGACGACAAAAGAAGTCATTCAATGGTAAAAAAGAACTTGATACAATTCCAGAGCCACTTTCTGGGGAGGATGTGTATTTAAAATTGAAAGATCTTGAATTTTCTAGAGGGAAGAAGAACCATAAGAAACGGTTGATGAACAGAAGTGACAAAATTTGTTGGAATAGATTATCTTCTTTTTTTGAGTTGCCATACTGGAAGGATCTTCATAGCTTGCCCCTATCAGAATATGTTACTCCTACCAATTACTTTCATTATGTAAAAAAGACATCTAAACGTGAGGATGAGATTATACTTGAGAATAAAGAACTTCGAAGGCGTGTAAGCGAATTAGAAGCACATAACCACTCAAACTTGTCTAGACCATTATCTGGACATGGTAGCTGTTCGAAGCCAAATATCTTAGAAGAGAGTGACTCGATGAAAATAATCAAAGGGAAGAGTAAGTTGATGGATAAAATCGAAGGGAAAGAGGTGGAGGAGATCAATGTAAATGACGACAAAGTAGAGTTGGACATCTTTCATTGA
Homology
[Close]
BLAST of CSPI01G18390 vs. TrEMBL
Match: A0A0K9JUY8_9BURK (Uncharacterized protein OS=Candidatus Burkholderia humilis GN=BHUM_05676c PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 4.0e-59
Identity = 103/176 (58.52%), Postives = 136/176 (77.27%), Query Frame = 1 

Query: 1   MLISGPKQPGDDIGIYLAPLIEDLKLLWESGVECYDAYREEPFNLRSVLLWTINDFPAYG 60
           +LI+GPKQ G+DI +YLAPL+++LKLLWE G+  YDAYR+E FNLR++LLWTINDFPAYG
Sbjct: 345 LLIAGPKQAGNDIDVYLAPLVDELKLLWEVGITAYDAYRQESFNLRAILLWTINDFPAYG 404

Query: 61  NLSGCCVKGYKACPICGDNTNSIRLKYGKKMAYLGHRRFLARNHLYRRQKKSFNGKKELD 120
           NL+GC VKGY+ACP+C + T++ RLK+ +KM++ GHRRFL  +H YRRQKKSF+GK+E  
Sbjct: 405 NLAGCYVKGYRACPVCEEKTHATRLKHSRKMSFTGHRRFLHASHPYRRQKKSFDGKQEFR 464

Query: 121 TIPEPLSGEDVYLKLKDLEFSRGKKNHKKRLMNRSDKICWNRLSSFFELPYWKDLH 177
             P PLSG D+  K+K ++   GK +  ++L    DK CW + S FFEL YW+ LH
Sbjct: 465 PAPTPLSGSDILEKVKGIQCQMGKMSCNRQLKQDDDKGCWKKKSIFFELEYWEHLH 520

[Close]
BLAST of CSPI01G18390 vs. TrEMBL
Match: A5AWJ4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004106 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 4.0e-59
Identity = 106/176 (60.23%), Postives = 137/176 (77.84%), Query Frame = 1 

Query: 1   MLISGPKQPGDDIGIYLAPLIEDLKLLWESGVECYDAYREEPFNLRSVLLWTINDFPAYG 60
           +LISGP+QPG+DI  YLAPL++DLK+LW+ GVECYD +++E F LR+VLLWTINDFPAYG
Sbjct: 277 LLISGPRQPGNDIDXYLAPLLDDLKMLWDVGVECYDVHQQEVFTLRAVLLWTINDFPAYG 336

Query: 61  NLSGCCVKGYKACPICGDNTNSIRLKYGKKMAYLGHRRFLARNHLYRRQKKSFNGKKELD 120
           NLSGC VKGY ACPICG++T S RLK+GKK +Y GHRRFL  NH +R+QKK+FNGK+E  
Sbjct: 337 NLSGCVVKGYFACPICGEDTFSHRLKHGKKNSYTGHRRFLPCNHPFRKQKKAFNGKQEFS 396

Query: 121 TIPEPLSGEDVYLKLKDLEFSRGKKNHKKRLMNRSDKICWNRLSSFFELPYWKDLH 177
           + P+PLSGE++  K+  +  S GK  + +  +N +   CW + S FF+L YWK LH
Sbjct: 397 SPPQPLSGEEILRKIXVISNSWGKNKNSRGKLNVNTTNCWKKKSIFFDLEYWKYLH 452

[Close]
BLAST of CSPI01G18390 vs. TrEMBL
Match: A5BIL3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034073 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 4.8e-57
Identity = 108/176 (61.36%), Postives = 132/176 (75.00%), Query Frame = 1 

Query: 1   MLISGPKQPGDDIGIYLAPLIEDLKLLWESGVECYDAYREEPFNLRSVLLWTINDFPAYG 60
           +LISGP+QPG+DI IYLAPLIEDLK LWE GVE YDAY+ E F LR VLLWTINDFPAYG
Sbjct: 193 LLISGPQQPGNDIDIYLAPLIEDLKTLWEIGVEAYDAYQREVFTLRVVLLWTINDFPAYG 252

Query: 61  NLSGCCVKGYKACPICGDNTNSIRLKYGKKMAYLGHRRFLARNHLYRRQKKSFNGKKELD 120
           NLSGC VKGY ACPICG  T S RLK+G+K ++ GHRRFL  NH +R+ +K+FNG++E  
Sbjct: 253 NLSGCTVKGYFACPICGPETYSHRLKHGRKNSFTGHRRFLPCNHPFRKHRKAFNGEQEFR 312

Query: 121 TIPEPLSGEDVYLKLKDLEFSRGKKNHKKRLMNRSDKICWNRLSSFFELPYWKDLH 177
           + P+PLSGE++ LK+  +  S GKK  +    N +   CW + S FFEL YW+ LH
Sbjct: 313 SPPQPLSGEEILLKMNAICNSWGKKRGRHEKSNVTYTNCWKKKSIFFELEYWRYLH 368

[Close]
BLAST of CSPI01G18390 vs. TrEMBL
Match: A5B258_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021512 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 3.1e-56
Identity = 103/176 (58.52%), Postives = 134/176 (76.14%), Query Frame = 1 

Query: 1   MLISGPKQPGDDIGIYLAPLIEDLKLLWESGVECYDAYREEPFNLRSVLLWTINDFPAYG 60
           +LISGP+QPG+DI +YLAPL++DLK+LW+ GVECYD +++E F LR VLLWTINDFPAYG
Sbjct: 183 LLISGPRQPGNDIDVYLAPLLDDLKMLWDVGVECYDVHQQEVFTLRVVLLWTINDFPAYG 242

Query: 61  NLSGCCVKGYKACPICGDNTNSIRLKYGKKMAYLGHRRFLARNHLYRRQKKSFNGKKELD 120
           NLSGC VKGY AC ICG++T S RLK+GKK +Y GH  FL  NH +R+QKK+FNGK+E  
Sbjct: 243 NLSGCVVKGYFACLICGEDTFSHRLKHGKKNSYTGHIIFLPCNHPFRKQKKAFNGKQEFS 302

Query: 121 TIPEPLSGEDVYLKLKDLEFSRGKKNHKKRLMNRSDKICWNRLSSFFELPYWKDLH 177
           + P+PLSGE++  K+  +  S GK  + +  +N +   CW + S FF+L YWK LH
Sbjct: 303 SPPQPLSGEEILRKIDVISNSWGKNKNSRGKLNVNTTNCWKKKSIFFDLEYWKYLH 358

[Close]
BLAST of CSPI01G18390 vs. TrEMBL
Match: A5AWV0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018163 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.1e-53
Identity = 105/176 (59.66%), Postives = 132/176 (75.00%), Query Frame = 1 

Query: 1   MLISGPKQPGDDIGIYLAPLIEDLKLLWESGVECYDAYREEPFNLRSVLLWTINDFPAYG 60
           +LISGP+QPG+DI IYLAPLIEDLK LWE GV+ YDA++ E F LR+VLLWTI+DFPAYG
Sbjct: 223 LLISGPRQPGNDIDIYLAPLIEDLKTLWEVGVQAYDAHQREFFTLRAVLLWTISDFPAYG 282

Query: 61  NLSGCCVKGYKACPICGDNTNSIRLKYGKKMAYLGHRRFLARNHLYRRQKKSFNGKKELD 120
           NLSGC VKGY  CPICG+ T S RLK+GKK +Y GHRRFL  NH +R+QKK+F+G++E  
Sbjct: 283 NLSGCTVKGYFGCPICGEETYSRRLKHGKKNSYTGHRRFLPCNHPFRKQKKAFDGEQEFR 342

Query: 121 TIPEPLSGEDVYLKLKDLEFSRGKKNHKKRLMNRSDKICWNRLSSFFELPYWKDLH 177
             P+ L+GE++   LK ++F+RGK          S+  CW + S FF+L YWK LH
Sbjct: 343 PPPQILTGEEI---LKKVKFNRGKS-------KVSNPNCWKKKSIFFDLEYWKYLH 388

[Close]
BLAST of CSPI01G18390 vs. NCBI nr
Match: gi|659129657|ref|XP_008464776.1| (PREDICTED: uncharacterized protein LOC103502584 [Cucumis melo])

HSP 1 Score: 240.7 bits (613), Expect = 3.0e-60
Identity = 112/176 (63.64%), Postives = 137/176 (77.84%), Query Frame = 1 

Query: 1   MLISGPKQPGDDIGIYLAPLIEDLKLLWESGVECYDAYREEPFNLRSVLLWTINDFPAYG 60
           MLISGPKQP  DI +YLAPLI DLKL+WE GV+C+DA+R E F L++VLLWTINDFPAYG
Sbjct: 1   MLISGPKQPEYDINVYLAPLIYDLKLMWEEGVQCFDAHRNERFTLQAVLLWTINDFPAYG 60

Query: 61  NLSGCCVKGYKACPICGDNTNSIRLKYGKKMAYLGHRRFLARNHLYRRQKKSFNGKKELD 120
           NL GC VKGYKACPICG+ T+SIRL YGKK AY+GHR++L R+H YRRQ+K+F+G +E  
Sbjct: 61  NLCGCSVKGYKACPICGEETSSIRLPYGKKNAYMGHRKYLPRHHPYRRQEKAFDGNQEHG 120

Query: 121 TIPEPLSGEDVYLKLKDLEFSRGKKNHKKRLMNRSDKICWNRLSSFFELPYWKDLH 177
           T P PLSGE +Y KLKD  F  GK++  +RL        W R+S+F+EL YWK +H
Sbjct: 121 TPPLPLSGETIYNKLKDKTFPCGKRS-TRRLNEDISNEYWKRISAFYELAYWKKIH 175

[Close]
BLAST of CSPI01G18390 vs. NCBI nr
Match: gi|147787846|emb|CAN71753.1| (hypothetical protein VITISV_004106 [Vitis vinifera])

HSP 1 Score: 236.5 bits (602), Expect = 5.7e-59
Identity = 106/176 (60.23%), Postives = 137/176 (77.84%), Query Frame = 1 

Query: 1   MLISGPKQPGDDIGIYLAPLIEDLKLLWESGVECYDAYREEPFNLRSVLLWTINDFPAYG 60
           +LISGP+QPG+DI  YLAPL++DLK+LW+ GVECYD +++E F LR+VLLWTINDFPAYG
Sbjct: 277 LLISGPRQPGNDIDXYLAPLLDDLKMLWDVGVECYDVHQQEVFTLRAVLLWTINDFPAYG 336

Query: 61  NLSGCCVKGYKACPICGDNTNSIRLKYGKKMAYLGHRRFLARNHLYRRQKKSFNGKKELD 120
           NLSGC VKGY ACPICG++T S RLK+GKK +Y GHRRFL  NH +R+QKK+FNGK+E  
Sbjct: 337 NLSGCVVKGYFACPICGEDTFSHRLKHGKKNSYTGHRRFLPCNHPFRKQKKAFNGKQEFS 396

Query: 121 TIPEPLSGEDVYLKLKDLEFSRGKKNHKKRLMNRSDKICWNRLSSFFELPYWKDLH 177
           + P+PLSGE++  K+  +  S GK  + +  +N +   CW + S FF+L YWK LH
Sbjct: 397 SPPQPLSGEEILRKIXVISNSWGKNKNSRGKLNVNTTNCWKKKSIFFDLEYWKYLH 452

[Close]
BLAST of CSPI01G18390 vs. NCBI nr
Match: gi|900952032|gb|KMZ11551.1| (hypothetical protein BHUM_05676c [Candidatus Burkholderia humilis])

HSP 1 Score: 236.5 bits (602), Expect = 5.7e-59
Identity = 103/176 (58.52%), Postives = 136/176 (77.27%), Query Frame = 1 

Query: 1   MLISGPKQPGDDIGIYLAPLIEDLKLLWESGVECYDAYREEPFNLRSVLLWTINDFPAYG 60
           +LI+GPKQ G+DI +YLAPL+++LKLLWE G+  YDAYR+E FNLR++LLWTINDFPAYG
Sbjct: 345 LLIAGPKQAGNDIDVYLAPLVDELKLLWEVGITAYDAYRQESFNLRAILLWTINDFPAYG 404

Query: 61  NLSGCCVKGYKACPICGDNTNSIRLKYGKKMAYLGHRRFLARNHLYRRQKKSFNGKKELD 120
           NL+GC VKGY+ACP+C + T++ RLK+ +KM++ GHRRFL  +H YRRQKKSF+GK+E  
Sbjct: 405 NLAGCYVKGYRACPVCEEKTHATRLKHSRKMSFTGHRRFLHASHPYRRQKKSFDGKQEFR 464

Query: 121 TIPEPLSGEDVYLKLKDLEFSRGKKNHKKRLMNRSDKICWNRLSSFFELPYWKDLH 177
             P PLSG D+  K+K ++   GK +  ++L    DK CW + S FFEL YW+ LH
Sbjct: 465 PAPTPLSGSDILEKVKGIQCQMGKMSCNRQLKQDDDKGCWKKKSIFFELEYWEHLH 520

[Close]
BLAST of CSPI01G18390 vs. NCBI nr
Match: gi|659125772|ref|XP_008462854.1| (PREDICTED: uncharacterized protein LOC103501133 [Cucumis melo])

HSP 1 Score: 233.8 bits (595), Expect = 3.7e-58
Identity = 110/176 (62.50%), Postives = 136/176 (77.27%), Query Frame = 1 

Query: 1   MLISGPKQPGDDIGIYLAPLIEDLKLLWESGVECYDAYREEPFNLRSVLLWTINDFPAYG 60
           MLISGPKQPG DI +YLAPLI+DLKL+WE GV+ +DA+R E F LR+VLLWTINDFPAYG
Sbjct: 96  MLISGPKQPGYDIHVYLAPLIDDLKLMWEEGVQRFDAHRNERFTLRAVLLWTINDFPAYG 155

Query: 61  NLSGCCVKGYKACPICGDNTNSIRLKYGKKMAYLGHRRFLARNHLYRRQKKSFNGKKELD 120
           NL GC VKGY+ACPICG+ T+SIRL +GKK AY+GHR++L  +H YRRQKK+F+G +E  
Sbjct: 156 NLCGCSVKGYEACPICGEETSSIRLPHGKKNAYMGHRKYLPHHHPYRRQKKAFDGNQEHG 215

Query: 121 TIPEPLSGEDVYLKLKDLEFSRGKKNHKKRLMNRSDKICWNRLSSFFELPYWKDLH 177
           T P PL GE +Y +LKD  F  GK++  +RL        W R+S+F+EL YWK LH
Sbjct: 216 TPPLPLLGETIYNRLKDKTFPCGKRS-SRRLNEDILNDYWKRISAFYELAYWKKLH 270

[Close]
BLAST of CSPI01G18390 vs. NCBI nr
Match: gi|659090010|ref|XP_008445784.1| (PREDICTED: uncharacterized protein LOC103488708 [Cucumis melo])

HSP 1 Score: 233.8 bits (595), Expect = 3.7e-58
Identity = 109/176 (61.93%), Postives = 136/176 (77.27%), Query Frame = 1 

Query: 1   MLISGPKQPGDDIGIYLAPLIEDLKLLWESGVECYDAYREEPFNLRSVLLWTINDFPAYG 60
           MLISGPKQP  DI +YLAPLI+DLKL+WE GV+C++A+R E F +R+VLLWTINDF AYG
Sbjct: 208 MLISGPKQPRYDINVYLAPLIDDLKLMWEEGVQCFNAHRNEIFTMRAVLLWTINDFHAYG 267

Query: 61  NLSGCCVKGYKACPICGDNTNSIRLKYGKKMAYLGHRRFLARNHLYRRQKKSFNGKKELD 120
           NL GC VKGYKACPICG+ T+SIRL +GKK AY+GHR++L  +H YRRQKK+F+G +E  
Sbjct: 268 NLYGCSVKGYKACPICGEETSSIRLPHGKKNAYMGHRKYLPSHHPYRRQKKAFDGNQEHG 327

Query: 121 TIPEPLSGEDVYLKLKDLEFSRGKKNHKKRLMNRSDKICWNRLSSFFELPYWKDLH 177
           T P PLSGE +Y +LKD  F  GK++  +RL        W R+S+F+EL YWK LH
Sbjct: 328 TPPLPLSGETIYNRLKDKTFPCGKRS-SRRLNEDIPNDYWKRISAFYELAYWKKLH 382

The following BLAST results are available for this feature:
BLAST of CSPI01G18390 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI01G18390 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0K9JUY8_9BURK4.0e-5958.52Uncharacterized protein OS=Candidatus Burkholderia humilis GN=BHUM_05676c PE=4 S... [more]
A5AWJ4_VITVI4.0e-5960.23Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004106 PE=4 SV=1[more]
A5BIL3_VITVI4.8e-5761.36Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034073 PE=4 SV=1[more]
A5B258_VITVI3.1e-5658.52Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021512 PE=4 SV=1[more]
A5AWV0_VITVI1.1e-5359.66Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018163 PE=4 SV=1[more]
BLAST of CSPI01G18390 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI01G18390 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659129657|ref|XP_008464776.1|3.0e-6063.64PREDICTED: uncharacterized protein LOC103502584 [Cucumis melo][more]
gi|147787846|emb|CAN71753.1|5.7e-5960.23hypothetical protein VITISV_004106 [Vitis vinifera][more]
gi|900952032|gb|KMZ11551.1|5.7e-5958.52hypothetical protein BHUM_05676c [Candidatus Burkholderia humilis][more]
gi|659125772|ref|XP_008462854.1|3.7e-5862.50PREDICTED: uncharacterized protein LOC103501133 [Cucumis melo][more]
gi|659090010|ref|XP_008445784.1|3.7e-5861.93PREDICTED: uncharacterized protein LOC103488708 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004242Transposase_21
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G18390.1CSPI01G18390.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004242Transposon, En/Spm-likePFAMPF02992Transposase_21coord: 1..137
score: 6.2
NoneNo IPR availableunknownCoilCoilcoord: 200..220
scor
NoneNo IPR availablePANTHERPTHR10775UNCHARACTERIZEDcoord: 1..175
score: 4.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI01G18390MELO3C010150Melon (DHL92) v3.5.1cpimeB057
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G18390Cucumber (Chinese Long) v2cpicuB001
CSPI01G18390Cucumber (Chinese Long) v2cpicuB014
CSPI01G18390Watermelon (Charleston Gray)cpiwcgB014
CSPI01G18390Watermelon (97103) v1cpiwmB085
CSPI01G18390Bottle gourd (USVL1VR-Ls)cpilsiB010
CSPI01G18390Melon (DHL92) v3.6.1cpimedB067
CSPI01G18390Cucumber (Gy14) v2cgybcpiB002
CSPI01G18390Cucumber (Chinese Long) v3cpicucB000
CSPI01G18390Cucumber (Chinese Long) v3cpicucB020
CSPI01G18390Watermelon (97103) v2cpiwmbB024
CSPI01G18390Wax gourdcpiwgoB006
CSPI01G18390Wild cucumber (PI 183967)cpicpiB006
CSPI01G18390Cucumber (Gy14) v1cgycpiB096