Bhi12M001950 (mRNA) Wax gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGATCGCACCGGGAGTTCCGAAAGTTTCCGAAGGAAAGGTTGAAATTGAAGCTGAGATATCTGAGGATTACACATGGGGAAAAACAGAACAAATGAAATGTCTATCTGAGGTTGTCCATGAGGTTACTGTGCCTGCTTGGACTAAAGTAAAGGCTAGTGTAATGGCAACACGAGCTAGTTGTGACGTTCCTTTCTCCTACACTCAACGAGACAAACTCGTGAACGGGAGTATATTACTCACCGATACCATGACGGTGTGTCTATAA ATGACGATCGCACCGGGAGTTCCGAAAGTTTCCGAAGGAAAGGTTGAAATTGAAGCTGAGATATCTGAGGATTACACATGGGGAAAAACAGAACAAATGAAATGTCTATCTGAGGTTGTCCATGAGGTTACTGTGCCTGCTTGGACTAAAGTAAAGGCTAGTGTAATGGCAACACGAGCTAGTTGTGACGTTCCTTTCTCCTACACTCAACGAGACAAACTCGTGAACGGGAGTATATTACTCACCGATACCATGACGGTGTGTCTATAA ATGACGATCGCACCGGGAGTTCCGAAAGTTTCCGAAGGAAAGGTTGAAATTGAAGCTGAGATATCTGAGGATTACACATGGGGAAAAACAGAACAAATGAAATGTCTATCTGAGGTTGTCCATGAGGTTACTGTGCCTGCTTGGACTAAAGTAAAGGCTAGTGTAATGGCAACACGAGCTAGTTGTGACGTTCCTTTCTCCTACACTCAACGAGACAAACTCGTGAACGGGAGTATATTACTCACCGATACCATGACGGTGTGTCTATAA MTIAPGVPKVSEGKVEIEAEISEDYTWGKTEQMKCLSEVVHEVTVPAWTKVKASVMATRASCDVPFSYTQRDKLVNGSILLTDTMTVCL
BLAST of Bhi12M001950 vs. TrEMBL
Match: tr|A0A0A0KDU4|A0A0A0KDU4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G107330 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 8.0e-20 Identity = 54/78 (69.23%), Postives = 63/78 (80.77%), Query Frame = 0
BLAST of Bhi12M001950 vs. TrEMBL
Match: tr|A0A1S3CD76|A0A1S3CD76_CUCME (uncharacterized protein LOC103499071 OS=Cucumis melo OX=3656 GN=LOC103499071 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 6.8e-19 Identity = 52/78 (66.67%), Postives = 63/78 (80.77%), Query Frame = 0
BLAST of Bhi12M001950 vs. TrEMBL
Match: tr|A0A1S3CBK3|A0A1S3CBK3_CUCME (uncharacterized protein LOC103498960 OS=Cucumis melo OX=3656 GN=LOC103498960 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 6.4e-17 Identity = 43/81 (53.09%), Postives = 60/81 (74.07%), Query Frame = 0
BLAST of Bhi12M001950 vs. TrEMBL
Match: tr|A0A0A0KD71|A0A0A0KD71_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G086130 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 6.4e-17 Identity = 42/79 (53.16%), Postives = 58/79 (73.42%), Query Frame = 0
BLAST of Bhi12M001950 vs. TrEMBL
Match: tr|A0A0A0KBV4|A0A0A0KBV4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G085110 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.1e-16 Identity = 42/81 (51.85%), Postives = 60/81 (74.07%), Query Frame = 0
BLAST of Bhi12M001950 vs. NCBI nr
Match: XP_022155428.1 (uncharacterized protein LOC111022575 [Momordica charantia]) HSP 1 Score: 127.9 bits (320), Expect = 1.7e-26 Identity = 60/80 (75.00%), Postives = 70/80 (87.50%), Query Frame = 0
BLAST of Bhi12M001950 vs. NCBI nr
Match: XP_022155408.1 (uncharacterized protein LOC111022556 [Momordica charantia]) HSP 1 Score: 111.3 bits (277), Expect = 1.7e-21 Identity = 49/82 (59.76%), Postives = 66/82 (80.49%), Query Frame = 0
BLAST of Bhi12M001950 vs. NCBI nr
Match: XP_022157624.1 (uncharacterized protein LOC111024285 [Momordica charantia]) HSP 1 Score: 109.4 bits (272), Expect = 6.4e-21 Identity = 48/82 (58.54%), Postives = 66/82 (80.49%), Query Frame = 0
BLAST of Bhi12M001950 vs. NCBI nr
Match: XP_004140621.1 (PREDICTED: uncharacterized protein LOC101217825 [Cucumis sativus]) HSP 1 Score: 105.1 bits (261), Expect = 1.2e-19 Identity = 54/78 (69.23%), Postives = 63/78 (80.77%), Query Frame = 0
BLAST of Bhi12M001950 vs. NCBI nr
Match: KGN46532.1 (hypothetical protein Csa_6G107330 [Cucumis sativus]) HSP 1 Score: 105.1 bits (261), Expect = 1.2e-19 Identity = 54/78 (69.23%), Postives = 63/78 (80.77%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
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