Bhi12M001912 (mRNA) Wax gourd

NameBhi12M001912
TypemRNA
OrganismBenincasa hispida (Wax gourd)
DescriptionNatterin-4
Locationchr12 : 66939445 .. 66939780 (-)
Sequence length336
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAGCTTTGGTGACTTTGCCGAAATATATCATGTTCAAGGGCGACAACGGGGGGTATCTTCAAGGTCATTCACAAGATGCCATGAATATTTACAGTTCTTAGGTAATGATCCATCAGCCTATGCAGTAGGGAATGAGGTATTTAAAGTGGGCGATGGAAATGTTAGAATTAAGTCATTACATTGGGGTAAATTTTGGAAGAGTGATCCTAATTGGATTTACGCTAATTCAAGTGATACAAGTAGTAATGATAAATCCACTTTGTTTACTCCTATAAAGGTTAGTGATAATGTGATAGGCATTAAGAATTTGGGTGGGAATCAATTGTACTAA

mRNA sequence

ATGGGAAGCTTTGGTGACTTTGCCGAAATATATCATGTTCAAGGGCGACAACGGGGGGTATCTTCAAGGTCATTCACAAGATGCCATGAATATTTACAGTTCTTAGGTAATGATCCATCAGCCTATGCAGTAGGGAATGAGGTATTTAAAGTGGGCGATGGAAATGTTAGAATTAAGTCATTACATTGGGGTAAATTTTGGAAGAGTGATCCTAATTGGATTTACGCTAATTCAAGTGATACAAGTAGTAATGATAAATCCACTTTGTTTACTCCTATAAAGGTTAGTGATAATGTGATAGGCATTAAGAATTTGGGTGGGAATCAATTGTACTAA

Coding sequence (CDS)

ATGGGAAGCTTTGGTGACTTTGCCGAAATATATCATGTTCAAGGGCGACAACGGGGGGTATCTTCAAGGTCATTCACAAGATGCCATGAATATTTACAGTTCTTAGGTAATGATCCATCAGCCTATGCAGTAGGGAATGAGGTATTTAAAGTGGGCGATGGAAATGTTAGAATTAAGTCATTACATTGGGGTAAATTTTGGAAGAGTGATCCTAATTGGATTTACGCTAATTCAAGTGATACAAGTAGTAATGATAAATCCACTTTGTTTACTCCTATAAAGGTTAGTGATAATGTGATAGGCATTAAGAATTTGGGTGGGAATCAATTGTACTAA

Protein sequence

MGSFGDFAEIYHVQGRQRGVSSRSFTRCHEYLQFLGNDPSAYAVGNEVFKVGDGNVRIKSLHWGKFWKSDPNWIYANSSDTSSNDKSTLFTPIKVSDNVIGIKNLGGNQLY
BLAST of Bhi12M001912 vs. TrEMBL
Match: tr|A0A1S3C8E4|A0A1S3C8E4_CUCME (uncharacterized protein LOC103497999 OS=Cucumis melo OX=3656 GN=LOC103497999 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.4e-21
Identity = 49/84 (58.33%), Postives = 68/84 (80.95%), Query Frame = 0

Query: 29  HEYLQFLGNDPSAYAVGNEVFKVGDGNVRIKSLHWGKFWKSDPNWIYANSSDTSSNDKST 88
           + YL+F  +DP ++ VGNEVF++ DG VRIKSL+WGKFW+   +WI+A+S+DTS+N+  T
Sbjct: 174 YPYLRFSSSDPYSHPVGNEVFRMSDGKVRIKSLYWGKFWRCTGSWIWADSTDTSANNHYT 233

Query: 89  LFTPIKVSDNVIGIKNLG-GNQLY 112
           LFTP++VSDNVI +KNLG G Q +
Sbjct: 234 LFTPVQVSDNVIALKNLGEGTQFF 257

BLAST of Bhi12M001912 vs. TrEMBL
Match: tr|A0A2R6R6R8|A0A2R6R6R8_ACTCH (Natterin-3 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc10740 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.9e-18
Identity = 45/80 (56.25%), Postives = 59/80 (73.75%), Query Frame = 0

Query: 29  HEYLQFLGNDPSAYAVGNEVFKVGDGNVRIKSLHWGKFWKSDPNWIYANSSDTSSNDKST 88
           + YLQF  +D     VGNEVF   DG+VRIKS H+GKFW+  PNWI+A+S DT+SN+  T
Sbjct: 181 YRYLQFGSSDIGDPTVGNEVFTTHDGSVRIKSDHFGKFWRRSPNWIWADSDDTTSNNSDT 240

Query: 89  LFTPIKVSDNVIGIKNLGGN 109
           LF PIKV +N++ ++NLG N
Sbjct: 241 LFWPIKVDNNIVALRNLGNN 260

BLAST of Bhi12M001912 vs. TrEMBL
Match: tr|F6HZZ6|F6HZZ6_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_07s0005g06090 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 7.9e-17
Identity = 40/80 (50.00%), Postives = 59/80 (73.75%), Query Frame = 0

Query: 29  HEYLQFLGNDPSAYAVGNEVFKVGDGNVRIKSLHWGKFWKSDPNWIYANSSDTSSNDKST 88
           H YL+F  +D     VGNEVF   DG+VRIKS ++G+FW+  PNWI+A+S D+++N+  T
Sbjct: 181 HPYLEFASSDIGDPTVGNEVFTTHDGSVRIKSDYFGRFWRRSPNWIWADSDDSTTNNSDT 240

Query: 89  LFTPIKVSDNVIGIKNLGGN 109
           LF P++V +NV+ ++NLG N
Sbjct: 241 LFWPVRVDNNVVALRNLGNN 260

BLAST of Bhi12M001912 vs. TrEMBL
Match: tr|W9RM79|W9RM79_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_013061 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.0e-16
Identity = 39/80 (48.75%), Postives = 57/80 (71.25%), Query Frame = 0

Query: 29  HEYLQFLGNDPSAYAVGNEVFKVGDGNVRIKSLHWGKFWKSDPNWIYANSSDTSSNDKST 88
           + YLQF+  D     + NE+   GDG VRI+SL  G FW+  PNWI+A+S+D++ +D +T
Sbjct: 189 YPYLQFVSTDSGDQTIANEISTFGDGFVRIRSLSTGNFWRRSPNWIWADSTDSTGSDSNT 248

Query: 89  LFTPIKVSDNVIGIKNLGGN 109
           LF PIK++DNV+ ++NLG N
Sbjct: 249 LFLPIKLADNVVALRNLGNN 268

BLAST of Bhi12M001912 vs. TrEMBL
Match: tr|D7U3H5|D7U3H5_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_07s0005g06000 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 5.1e-16
Identity = 39/80 (48.75%), Postives = 56/80 (70.00%), Query Frame = 0

Query: 29  HEYLQFLGNDPSAYAVGNEVFKVGDGNVRIKSLHWGKFWKSDPNWIYANSSDTSSNDKST 88
           H YL+F  +D     VGNEVF   D +VRIKS H+G+FW+  PNWI+A+S D+++N+  T
Sbjct: 181 HPYLEFASSDIGDPTVGNEVFTTHDRSVRIKSHHFGRFWRRSPNWIWADSDDSTTNNSDT 240

Query: 89  LFTPIKVSDNVIGIKNLGGN 109
           LF P++V  NV+ ++N G N
Sbjct: 241 LFWPVRVDKNVVALRNFGNN 260

BLAST of Bhi12M001912 vs. NCBI nr
Match: XP_008458670.1 (PREDICTED: uncharacterized protein LOC103497999 [Cucumis melo])

HSP 1 Score: 110.5 bits (275), Expect = 3.6e-21
Identity = 49/84 (58.33%), Postives = 68/84 (80.95%), Query Frame = 0

Query: 29  HEYLQFLGNDPSAYAVGNEVFKVGDGNVRIKSLHWGKFWKSDPNWIYANSSDTSSNDKST 88
           + YL+F  +DP ++ VGNEVF++ DG VRIKSL+WGKFW+   +WI+A+S+DTS+N+  T
Sbjct: 174 YPYLRFSSSDPYSHPVGNEVFRMSDGKVRIKSLYWGKFWRCTGSWIWADSTDTSANNHYT 233

Query: 89  LFTPIKVSDNVIGIKNLG-GNQLY 112
           LFTP++VSDNVI +KNLG G Q +
Sbjct: 234 LFTPVQVSDNVIALKNLGEGTQFF 257

BLAST of Bhi12M001912 vs. NCBI nr
Match: XP_023544075.1 (uncharacterized protein LOC111803769 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 101.7 bits (252), Expect = 1.7e-18
Identity = 45/78 (57.69%), Postives = 57/78 (73.08%), Query Frame = 0

Query: 31  YLQFLGNDPSAYAVGNEVFKVGDGNVRIKSLHWGKFWKSDPNWIYANSSDTSSNDKSTLF 90
           YLQF  ND     VGNEV    DGNVRIKS H+ KFW+  PNWI+A+S DT++NDK TLF
Sbjct: 182 YLQFSSNDIGDPTVGNEVSTTNDGNVRIKSNHFEKFWRRSPNWIWADSHDTTANDKDTLF 241

Query: 91  TPIKVSDNVIGIKNLGGN 109
            P+KV +N++ ++NLG N
Sbjct: 242 WPVKVDNNIVALRNLGNN 259

BLAST of Bhi12M001912 vs. NCBI nr
Match: PSS21691.1 (Natterin-3 like [Actinidia chinensis var. chinensis])

HSP 1 Score: 100.9 bits (250), Expect = 2.9e-18
Identity = 45/80 (56.25%), Postives = 59/80 (73.75%), Query Frame = 0

Query: 29  HEYLQFLGNDPSAYAVGNEVFKVGDGNVRIKSLHWGKFWKSDPNWIYANSSDTSSNDKST 88
           + YLQF  +D     VGNEVF   DG+VRIKS H+GKFW+  PNWI+A+S DT+SN+  T
Sbjct: 181 YRYLQFGSSDIGDPTVGNEVFTTHDGSVRIKSDHFGKFWRRSPNWIWADSDDTTSNNSDT 240

Query: 89  LFTPIKVSDNVIGIKNLGGN 109
           LF PIKV +N++ ++NLG N
Sbjct: 241 LFWPIKVDNNIVALRNLGNN 260

BLAST of Bhi12M001912 vs. NCBI nr
Match: XP_023544067.1 (uncharacterized protein LOC111803764 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 100.5 bits (249), Expect = 3.7e-18
Identity = 44/80 (55.00%), Postives = 59/80 (73.75%), Query Frame = 0

Query: 29  HEYLQFLGNDPSAYAVGNEVFKVGDGNVRIKSLHWGKFWKSDPNWIYANSSDTSSNDKST 88
           H YLQF  ND     VGNEV    DGNVRIKS ++GKFW+  PNWI+A+S DT++++K T
Sbjct: 180 HPYLQFSANDIGDPTVGNEVSTTHDGNVRIKSNYFGKFWRRSPNWIWADSHDTTASNKDT 239

Query: 89  LFTPIKVSDNVIGIKNLGGN 109
           LF P+KV +N++ ++NLG N
Sbjct: 240 LFWPVKVENNIVALRNLGNN 259

BLAST of Bhi12M001912 vs. NCBI nr
Match: XP_022156054.1 (uncharacterized protein LOC111023023 [Momordica charantia])

HSP 1 Score: 100.1 bits (248), Expect = 4.9e-18
Identity = 49/107 (45.79%), Postives = 73/107 (68.22%), Query Frame = 0

Query: 3   SFGDFAEIYHVQGRQRGVSSRS-FTRCHEYLQFLGNDPSAYAVGNEVFKVGDGNVRIKSL 62
           SF  F +    +G  RG   ++ + + HEY +F  ND +  AVGNEV     G+VRIKS 
Sbjct: 156 SFFIFPKHVAFKGGNRGKFLKAIWLQRHEYQEFSANDMADPAVGNEVSFTRHGDVRIKSN 215

Query: 63  HWGKFWKSDPNWIYANSSDTSSNDKSTLFTPIKVSDNVIGIKNLGGN 109
           H+GKFW+  PNWI+A+S+D ++N+K TLF P+KV++N++ ++NLG N
Sbjct: 216 HFGKFWRLSPNWIWADSTDPTANNKHTLFKPVKVANNIVALRNLGNN 262

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S3C8E4|A0A1S3C8E4_CUCME2.4e-2158.33uncharacterized protein LOC103497999 OS=Cucumis melo OX=3656 GN=LOC103497999 PE=... [more]
tr|A0A2R6R6R8|A0A2R6R6R8_ACTCH1.9e-1856.25Natterin-3 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc107... [more]
tr|F6HZZ6|F6HZZ6_VITVI7.9e-1750.00Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_07s0005g06090 PE=4 SV=... [more]
tr|W9RM79|W9RM79_9ROSA3.0e-1648.75Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_013061 PE=4 SV=1[more]
tr|D7U3H5|D7U3H5_VITVI5.1e-1648.75Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_07s0005g06000 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
XP_008458670.13.6e-2158.33PREDICTED: uncharacterized protein LOC103497999 [Cucumis melo][more]
XP_023544075.11.7e-1857.69uncharacterized protein LOC111803769 [Cucurbita pepo subsp. pepo][more]
PSS21691.12.9e-1856.25Natterin-3 like [Actinidia chinensis var. chinensis][more]
XP_023544067.13.7e-1855.00uncharacterized protein LOC111803764 [Cucurbita pepo subsp. pepo][more]
XP_022156054.14.9e-1845.79uncharacterized protein LOC111023023 [Momordica charantia][more]
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR036242Agglutinin_dom_sf

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Bhi12G001912Bhi12G001912gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Bhi12M001912cds.Bhi12M001912CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi12M001912.exon1Bhi12M001912.exon1exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Bhi12M001912Bhi12M001912-proteinpolypeptide


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:2.80.10.50coord: 18..111
e-value: 1.2E-19
score: 72.6
NoneNo IPR availablePANTHERPTHR39244FAMILY NOT NAMEDcoord: 22..108
IPR036242Agglutinin domain superfamilySUPERFAMILYSSF50382Agglutinincoord: 26..108