Bhi10M001639 (mRNA) Wax gourd

Overview
NameBhi10M001639
TypemRNA
OrganismBenincasa hispida (Wax gourd)
DescriptionGlutelin type-A
Locationchr10 : 50940704 .. 50940899 (-)
Sequence length196
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACATCGATTTGGCCCCTCAATTGCCGAAGAAGTTCTATGGTGGTGATGGAAGTTCATATTATTCTTGGCCTCCCAAGGAGCTTCACATGCTCCATGAAGGAAACATTGGCGCCTCCAAGCTCGCCCTTGAAAAGAATGGCTTTGCCCTCCCTCACTACTCTGATTCCGCCAAGGTCTCTTACGTTCTTCAAG

mRNA sequence

ATGGACATCGATTTGGCCCCTCAATTGCCGAAGAAGTTCTATGGTGGTGATGGAAGTTCATATTATTCTTGGCCTCCCAAGGAGCTTCACATGCTCCATGAAGGAAACATTGGCGCCTCCAAGCTCGCCCTTGAAAAGAATGGCTTTGCCCTCCCTCACTACTCTGATTCCGCCAAGGTCTCTTACGTTCTTCAAG

Coding sequence (CDS)

ATGGACATCGATTTGGCCCCTCAATTGCCGAAGAAGTTCTATGGTGGTGATGGAAGTTCATATTATTCTTGGCCTCCCAAGGAGCTTCACATGCTCCATGAAGGAAACATTGGCGCCTCCAAGCTCGCCCTTGAAAAGAATGGCTTTGCCCTCCCTCACTACTCTGATTCCGCCAAGGTCTCTTACGTTCTTCAAG

Protein sequence

MDIDLAPQLPKKFYGGDGSSYYSWPPKELHMLHEGNIGASKLALEKNGFALPHYSDSAKVSYVLQ
Homology
[Close]
BLAST of Bhi10M001639 vs. TAIR10
Match: AT1G07750.1 (RmlC-like cupins superfamily protein)

HSP 1 Score: 104.8 bits (260), Expect = 2.1e-23
Identity = 47/65 (72.31%), Postives = 57/65 (87.69%), Query Frame = 0 

Query: 1  MDIDLAPQLPKKFYGGDGSSYYSWPPKELHMLHEGNIGASKLALEKNGFALPHYSDSAKV 60
          M++DL P+LPKK YGGDG SY +W P+EL ML +GNIGA+KLALEKNGFA+P YSDS+KV
Sbjct: 1  MELDLTPKLPKKVYGGDGGSYSAWCPEELPMLKQGNIGAAKLALEKNGFAVPRYSDSSKV 60

Query: 61 SYVLQ 66
          +YVLQ
Sbjct: 61 AYVLQ 65

[Close]
BLAST of Bhi10M001639 vs. TAIR10
Match: AT2G28680.1 (RmlC-like cupins superfamily protein)

HSP 1 Score: 103.6 bits (257), Expect = 4.7e-23
Identity = 47/65 (72.31%), Postives = 56/65 (86.15%), Query Frame = 0 

Query: 1  MDIDLAPQLPKKFYGGDGSSYYSWPPKELHMLHEGNIGASKLALEKNGFALPHYSDSAKV 60
          M++DL+P+LPKK YGGDG SY++W P+EL ML +GNIGASKLALEK G ALP YSDS KV
Sbjct: 1  MELDLSPRLPKKVYGGDGGSYFAWCPEELPMLRDGNIGASKLALEKYGLALPRYSDSPKV 60

Query: 61 SYVLQ 66
          +YVLQ
Sbjct: 61 AYVLQ 65

[Close]
BLAST of Bhi10M001639 vs. TrEMBL
Match: tr|A0A1S3CG59|A0A1S3CG59_CUCME (glutelin type-B 5-like OS=Cucumis melo OX=3656 GN=LOC103500083 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 3.0e-24
Identity = 56/65 (86.15%), Postives = 58/65 (89.23%), Query Frame = 0 

Query: 1  MDIDLAPQLPKKFYGGDGSSYYSWPPKELHMLHEGNIGASKLALEKNGFALPHYSDSAKV 60
          M+IDL PQLPKK YGGDG SYYSW PKEL ML EGNIGASKLALEKNGFALP YSDSAKV
Sbjct: 1  MEIDLTPQLPKKIYGGDGGSYYSWSPKELPMLREGNIGASKLALEKNGFALPRYSDSAKV 60

Query: 61 SYVLQ 66
          +YVLQ
Sbjct: 61 AYVLQ 65

[Close]
BLAST of Bhi10M001639 vs. TrEMBL
Match: tr|A0A0A0K666|A0A0A0K666_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G281380 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 3.3e-23
Identity = 54/65 (83.08%), Postives = 57/65 (87.69%), Query Frame = 0 

Query: 1  MDIDLAPQLPKKFYGGDGSSYYSWPPKELHMLHEGNIGASKLALEKNGFALPHYSDSAKV 60
          M+IDL PQLPKK YG DG SYY+W PKEL ML EGNIGASKLALEKNGFALP YSDSAKV
Sbjct: 1  MEIDLTPQLPKKIYGSDGGSYYAWSPKELPMLREGNIGASKLALEKNGFALPRYSDSAKV 60

Query: 61 SYVLQ 66
          +YVLQ
Sbjct: 61 AYVLQ 65

[Close]
BLAST of Bhi10M001639 vs. TrEMBL
Match: tr|A0A1S2YJV5|A0A1S2YJV5_CICAR (glutelin type-A 2-like OS=Cicer arietinum OX=3827 GN=LOC101510077 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 6.3e-22
Identity = 52/65 (80.00%), Postives = 57/65 (87.69%), Query Frame = 0 

Query: 1  MDIDLAPQLPKKFYGGDGSSYYSWPPKELHMLHEGNIGASKLALEKNGFALPHYSDSAKV 60
          MDIDL+PQL KK YGG+G SYYSW P EL ML EGNIGA+KLALEKNGFALP YSDS+KV
Sbjct: 1  MDIDLSPQLAKKVYGGNGGSYYSWSPSELPMLREGNIGAAKLALEKNGFALPRYSDSSKV 60

Query: 61 SYVLQ 66
          +YVLQ
Sbjct: 61 AYVLQ 65

[Close]
BLAST of Bhi10M001639 vs. TrEMBL
Match: tr|A0A067L6Y6|A0A067L6Y6_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_05649 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.4e-21
Identity = 51/65 (78.46%), Postives = 57/65 (87.69%), Query Frame = 0 

Query: 1  MDIDLAPQLPKKFYGGDGSSYYSWPPKELHMLHEGNIGASKLALEKNGFALPHYSDSAKV 60
          MD+DL+P+LPKK YGGDG SY +W P EL ML EGNIGA+KLALEKNGFALP YSDSAKV
Sbjct: 1  MDLDLSPRLPKKVYGGDGGSYLAWCPSELAMLREGNIGAAKLALEKNGFALPRYSDSAKV 60

Query: 61 SYVLQ 66
          +YVLQ
Sbjct: 61 AYVLQ 65

[Close]
BLAST of Bhi10M001639 vs. TrEMBL
Match: tr|A0A218W7R8|A0A218W7R8_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr025022 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.8e-21
Identity = 51/65 (78.46%), Postives = 57/65 (87.69%), Query Frame = 0 

Query: 1  MDIDLAPQLPKKFYGGDGSSYYSWPPKELHMLHEGNIGASKLALEKNGFALPHYSDSAKV 60
          MDIDL+P+LPKK YGG+G SY++W PKEL ML  GNIGA KLALEKNGFALP YSDSAKV
Sbjct: 1  MDIDLSPKLPKKVYGGNGGSYHAWDPKELPMLKAGNIGAGKLALEKNGFALPRYSDSAKV 60

Query: 61 SYVLQ 66
          +YVLQ
Sbjct: 61 AYVLQ 65

[Close]
BLAST of Bhi10M001639 vs. NCBI nr
Match: XP_008461502.1 (PREDICTED: glutelin type-B 5-like [Cucumis melo])

HSP 1 Score: 119.4 bits (298), Expect = 4.5e-24
Identity = 56/65 (86.15%), Postives = 58/65 (89.23%), Query Frame = 0 

Query: 1  MDIDLAPQLPKKFYGGDGSSYYSWPPKELHMLHEGNIGASKLALEKNGFALPHYSDSAKV 60
          M+IDL PQLPKK YGGDG SYYSW PKEL ML EGNIGASKLALEKNGFALP YSDSAKV
Sbjct: 1  MEIDLTPQLPKKIYGGDGGSYYSWSPKELPMLREGNIGASKLALEKNGFALPRYSDSAKV 60

Query: 61 SYVLQ 66
          +YVLQ
Sbjct: 61 AYVLQ 65

[Close]
BLAST of Bhi10M001639 vs. NCBI nr
Match: XP_004150394.1 (PREDICTED: glutelin type-B 5-like isoform X1 [Cucumis sativus] >KGN44409.1 hypothetical protein Csa_7G281380 [Cucumis sativus])

HSP 1 Score: 115.9 bits (289), Expect = 5.0e-23
Identity = 54/65 (83.08%), Postives = 57/65 (87.69%), Query Frame = 0 

Query: 1  MDIDLAPQLPKKFYGGDGSSYYSWPPKELHMLHEGNIGASKLALEKNGFALPHYSDSAKV 60
          M+IDL PQLPKK YG DG SYY+W PKEL ML EGNIGASKLALEKNGFALP YSDSAKV
Sbjct: 1  MEIDLTPQLPKKIYGSDGGSYYAWSPKELPMLREGNIGASKLALEKNGFALPRYSDSAKV 60

Query: 61 SYVLQ 66
          +YVLQ
Sbjct: 61 AYVLQ 65

[Close]
BLAST of Bhi10M001639 vs. NCBI nr
Match: XP_011659088.1 (PREDICTED: 11S globulin seed storage protein 2-like isoform X2 [Cucumis sativus])

HSP 1 Score: 115.9 bits (289), Expect = 5.0e-23
Identity = 54/65 (83.08%), Postives = 57/65 (87.69%), Query Frame = 0 

Query: 1  MDIDLAPQLPKKFYGGDGSSYYSWPPKELHMLHEGNIGASKLALEKNGFALPHYSDSAKV 60
          M+IDL PQLPKK YG DG SYY+W PKEL ML EGNIGASKLALEKNGFALP YSDSAKV
Sbjct: 1  MEIDLTPQLPKKIYGSDGGSYYAWSPKELPMLREGNIGASKLALEKNGFALPRYSDSAKV 60

Query: 61 SYVLQ 66
          +YVLQ
Sbjct: 61 AYVLQ 65

[Close]
BLAST of Bhi10M001639 vs. NCBI nr
Match: XP_022932087.1 (glutelin type-D 1-like [Cucurbita moschata])

HSP 1 Score: 115.5 bits (288), Expect = 6.6e-23
Identity = 54/65 (83.08%), Postives = 56/65 (86.15%), Query Frame = 0 

Query: 1  MDIDLAPQLPKKFYGGDGSSYYSWPPKELHMLHEGNIGASKLALEKNGFALPHYSDSAKV 60
          MDIDL PQLPKK YGGDG SYYSW P EL ML  GNIGA+KLALEKNGFALP YSDSAKV
Sbjct: 1  MDIDLTPQLPKKLYGGDGGSYYSWSPAELPMLRHGNIGAAKLALEKNGFALPRYSDSAKV 60

Query: 61 SYVLQ 66
          +YVLQ
Sbjct: 61 AYVLQ 65

[Close]
BLAST of Bhi10M001639 vs. NCBI nr
Match: XP_022972918.1 (glutelin type-D 1-like [Cucurbita maxima])

HSP 1 Score: 115.5 bits (288), Expect = 6.6e-23
Identity = 54/65 (83.08%), Postives = 56/65 (86.15%), Query Frame = 0 

Query: 1  MDIDLAPQLPKKFYGGDGSSYYSWPPKELHMLHEGNIGASKLALEKNGFALPHYSDSAKV 60
          MDIDL PQLPKK YGGDG SYYSW P EL ML  GNIGA+KLALEKNGFALP YSDSAKV
Sbjct: 1  MDIDLTPQLPKKLYGGDGGSYYSWSPAELPMLRHGNIGAAKLALEKNGFALPRYSDSAKV 60

Query: 61 SYVLQ 66
          +YVLQ
Sbjct: 61 AYVLQ 65

The following BLAST results are available for this feature:
BLAST of Bhi10M001639 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G07750.12.1e-2372.31RmlC-like cupins superfamily protein[more]
AT2G28680.14.7e-2372.31RmlC-like cupins superfamily protein[more]
BLAST of Bhi10M001639 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi10M001639 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CG59|A0A1S3CG59_CUCME3.0e-2486.15glutelin type-B 5-like OS=Cucumis melo OX=3656 GN=LOC103500083 PE=4 SV=1[more]
tr|A0A0A0K666|A0A0A0K666_CUCSA3.3e-2383.08Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G281380 PE=4 SV=1[more]
tr|A0A1S2YJV5|A0A1S2YJV5_CICAR6.3e-2280.00glutelin type-A 2-like OS=Cicer arietinum OX=3827 GN=LOC101510077 PE=4 SV=1[more]
tr|A0A067L6Y6|A0A067L6Y6_JATCU1.4e-2178.46Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_05649 PE=4 SV=1[more]
tr|A0A218W7R8|A0A218W7R8_PUNGR1.8e-2178.46Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr025022 PE=4 SV=1[more]
BLAST of Bhi10M001639 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008461502.14.5e-2486.15PREDICTED: glutelin type-B 5-like [Cucumis melo][more]
XP_004150394.15.0e-2383.08PREDICTED: glutelin type-B 5-like isoform X1 [Cucumis sativus] >KGN44409.1 hypot... [more]
XP_011659088.15.0e-2383.08PREDICTED: 11S globulin seed storage protein 2-like isoform X2 [Cucumis sativus][more]
XP_022932087.16.6e-2383.08glutelin type-D 1-like [Cucurbita moschata][more]
XP_022972918.16.6e-2383.08glutelin type-D 1-like [Cucurbita maxima][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0045735nutrient reservoir activity
Vocabulary: INTERPRO
TermDefinition
IPR011051RmlC_Cupin_sf
IPR014710RmlC-like_jellyroll
IPR006045Cupin_1
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0045735 nutrient reservoir activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Bhi10G001639Bhi10G001639gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Bhi10M001639cds.Bhi10M001639CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi10M001639.exon1Bhi10M001639.exon1exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Bhi10M001639Bhi10M001639-proteinpolypeptide


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006045Cupin 1PFAMPF00190Cupin_1coord: 10..65
e-value: 2.4E-8
score: 33.6
IPR014710RmlC-like jelly roll foldGENE3DG3DSA:2.60.120.10coord: 10..65
e-value: 1.3E-7
score: 33.2
NoneNo IPR availablePANTHERPTHR31189:SF8CUPIN FAMILY PROTEINcoord: 1..65
NoneNo IPR availablePANTHERPTHR31189FAMILY NOT NAMEDcoord: 1..65
IPR011051RmlC-like cupin domain superfamilySUPERFAMILYSSF51182RmlC-like cupinscoord: 9..65