Bhi10G001639 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi10G001639
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Glutelin type-A
Location	chr10 : 50940704 .. 50940899 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACATCGATTTGGCCCCTCAATTGCCGAAGAAGTTCTATGGTGGTGATGGAAGTTCATATTATTCTTGGCCTCCCAAGGAGCTTCACATGCTCCATGAAGGAAACATTGGCGCCTCCAAGCTCGCCCTTGAAAAGAATGGCTTTGCCCTCCCTCACTACTCTGATTCCGCCAAGGTCTCTTACGTTCTTCAAG

mRNA sequence

ATGGACATCGATTTGGCCCCTCAATTGCCGAAGAAGTTCTATGGTGGTGATGGAAGTTCATATTATTCTTGGCCTCCCAAGGAGCTTCACATGCTCCATGAAGGAAACATTGGCGCCTCCAAGCTCGCCCTTGAAAAGAATGGCTTTGCCCTCCCTCACTACTCTGATTCCGCCAAGGTCTCTTACGTTCTTCAAG

Coding sequence (CDS)

ATGGACATCGATTTGGCCCCTCAATTGCCGAAGAAGTTCTATGGTGGTGATGGAAGTTCATATTATTCTTGGCCTCCCAAGGAGCTTCACATGCTCCATGAAGGAAACATTGGCGCCTCCAAGCTCGCCCTTGAAAAGAATGGCTTTGCCCTCCCTCACTACTCTGATTCCGCCAAGGTCTCTTACGTTCTTCAAG

Protein sequence

MDIDLAPQLPKKFYGGDGSSYYSWPPKELHMLHEGNIGASKLALEKNGFALPHYSDSAKVSYVLQ

Homology

[Close]

BLAST of Bhi10G001639 vs. TAIR10
Match: AT1G07750.1 (RmlC-like cupins superfamily protein)

HSP 1 Score: 104.8 bits (260), Expect = 2.1e-23
Identity = 47/65 (72.31%), Postives = 57/65 (87.69%), Query Frame = 0


Query: 1  MDIDLAPQLPKKFYGGDGSSYYSWPPKELHMLHEGNIGASKLALEKNGFALPHYSDSAKV 60
          M++DL P+LPKK YGGDG SY +W P+EL ML +GNIGA+KLALEKNGFA+P YSDS+KV
Sbjct: 1  MELDLTPKLPKKVYGGDGGSYSAWCPEELPMLKQGNIGAAKLALEKNGFAVPRYSDSSKV 60

Query: 61 SYVLQ 66
          +YVLQ
Sbjct: 61 AYVLQ 65

[Close]

BLAST of Bhi10G001639 vs. TAIR10
Match: AT2G28680.1 (RmlC-like cupins superfamily protein)

HSP 1 Score: 103.6 bits (257), Expect = 4.7e-23
Identity = 47/65 (72.31%), Postives = 56/65 (86.15%), Query Frame = 0


Query: 1  MDIDLAPQLPKKFYGGDGSSYYSWPPKELHMLHEGNIGASKLALEKNGFALPHYSDSAKV 60
          M++DL+P+LPKK YGGDG SY++W P+EL ML +GNIGASKLALEK G ALP YSDS KV
Sbjct: 1  MELDLSPRLPKKVYGGDGGSYFAWCPEELPMLRDGNIGASKLALEKYGLALPRYSDSPKV 60

Query: 61 SYVLQ 66
          +YVLQ
Sbjct: 61 AYVLQ 65

[Close]

BLAST of Bhi10G001639 vs. TrEMBL
Match: tr|A0A1S3CG59|A0A1S3CG59_CUCME (glutelin type-B 5-like OS=Cucumis melo OX=3656 GN=LOC103500083 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 3.0e-24
Identity = 56/65 (86.15%), Postives = 58/65 (89.23%), Query Frame = 0


Query: 1  MDIDLAPQLPKKFYGGDGSSYYSWPPKELHMLHEGNIGASKLALEKNGFALPHYSDSAKV 60
          M+IDL PQLPKK YGGDG SYYSW PKEL ML EGNIGASKLALEKNGFALP YSDSAKV
Sbjct: 1  MEIDLTPQLPKKIYGGDGGSYYSWSPKELPMLREGNIGASKLALEKNGFALPRYSDSAKV 60

Query: 61 SYVLQ 66
          +YVLQ
Sbjct: 61 AYVLQ 65

[Close]

BLAST of Bhi10G001639 vs. TrEMBL
Match: tr|A0A0A0K666|A0A0A0K666_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G281380 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 3.3e-23
Identity = 54/65 (83.08%), Postives = 57/65 (87.69%), Query Frame = 0


Query: 1  MDIDLAPQLPKKFYGGDGSSYYSWPPKELHMLHEGNIGASKLALEKNGFALPHYSDSAKV 60
          M+IDL PQLPKK YG DG SYY+W PKEL ML EGNIGASKLALEKNGFALP YSDSAKV
Sbjct: 1  MEIDLTPQLPKKIYGSDGGSYYAWSPKELPMLREGNIGASKLALEKNGFALPRYSDSAKV 60

Query: 61 SYVLQ 66
          +YVLQ
Sbjct: 61 AYVLQ 65

[Close]

BLAST of Bhi10G001639 vs. TrEMBL
Match: tr|A0A1S2YJV5|A0A1S2YJV5_CICAR (glutelin type-A 2-like OS=Cicer arietinum OX=3827 GN=LOC101510077 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 6.3e-22
Identity = 52/65 (80.00%), Postives = 57/65 (87.69%), Query Frame = 0


Query: 1  MDIDLAPQLPKKFYGGDGSSYYSWPPKELHMLHEGNIGASKLALEKNGFALPHYSDSAKV 60
          MDIDL+PQL KK YGG+G SYYSW P EL ML EGNIGA+KLALEKNGFALP YSDS+KV
Sbjct: 1  MDIDLSPQLAKKVYGGNGGSYYSWSPSELPMLREGNIGAAKLALEKNGFALPRYSDSSKV 60

Query: 61 SYVLQ 66
          +YVLQ
Sbjct: 61 AYVLQ 65

[Close]

BLAST of Bhi10G001639 vs. TrEMBL
Match: tr|A0A067L6Y6|A0A067L6Y6_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_05649 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.4e-21
Identity = 51/65 (78.46%), Postives = 57/65 (87.69%), Query Frame = 0


Query: 1  MDIDLAPQLPKKFYGGDGSSYYSWPPKELHMLHEGNIGASKLALEKNGFALPHYSDSAKV 60
          MD+DL+P+LPKK YGGDG SY +W P EL ML EGNIGA+KLALEKNGFALP YSDSAKV
Sbjct: 1  MDLDLSPRLPKKVYGGDGGSYLAWCPSELAMLREGNIGAAKLALEKNGFALPRYSDSAKV 60

Query: 61 SYVLQ 66
          +YVLQ
Sbjct: 61 AYVLQ 65

[Close]

BLAST of Bhi10G001639 vs. TrEMBL
Match: tr|A0A218W7R8|A0A218W7R8_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr025022 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.8e-21
Identity = 51/65 (78.46%), Postives = 57/65 (87.69%), Query Frame = 0


Query: 1  MDIDLAPQLPKKFYGGDGSSYYSWPPKELHMLHEGNIGASKLALEKNGFALPHYSDSAKV 60
          MDIDL+P+LPKK YGG+G SY++W PKEL ML  GNIGA KLALEKNGFALP YSDSAKV
Sbjct: 1  MDIDLSPKLPKKVYGGNGGSYHAWDPKELPMLKAGNIGAGKLALEKNGFALPRYSDSAKV 60

Query: 61 SYVLQ 66
          +YVLQ
Sbjct: 61 AYVLQ 65

[Close]

BLAST of Bhi10G001639 vs. NCBI nr
Match: XP_008461502.1 (PREDICTED: glutelin type-B 5-like [Cucumis melo])

HSP 1 Score: 119.4 bits (298), Expect = 4.5e-24
Identity = 56/65 (86.15%), Postives = 58/65 (89.23%), Query Frame = 0


Query: 1  MDIDLAPQLPKKFYGGDGSSYYSWPPKELHMLHEGNIGASKLALEKNGFALPHYSDSAKV 60
          M+IDL PQLPKK YGGDG SYYSW PKEL ML EGNIGASKLALEKNGFALP YSDSAKV
Sbjct: 1  MEIDLTPQLPKKIYGGDGGSYYSWSPKELPMLREGNIGASKLALEKNGFALPRYSDSAKV 60

Query: 61 SYVLQ 66
          +YVLQ
Sbjct: 61 AYVLQ 65

[Close]

BLAST of Bhi10G001639 vs. NCBI nr
Match: XP_004150394.1 (PREDICTED: glutelin type-B 5-like isoform X1 [Cucumis sativus] >KGN44409.1 hypothetical protein Csa_7G281380 [Cucumis sativus])

HSP 1 Score: 115.9 bits (289), Expect = 5.0e-23
Identity = 54/65 (83.08%), Postives = 57/65 (87.69%), Query Frame = 0


Query: 1  MDIDLAPQLPKKFYGGDGSSYYSWPPKELHMLHEGNIGASKLALEKNGFALPHYSDSAKV 60
          M+IDL PQLPKK YG DG SYY+W PKEL ML EGNIGASKLALEKNGFALP YSDSAKV
Sbjct: 1  MEIDLTPQLPKKIYGSDGGSYYAWSPKELPMLREGNIGASKLALEKNGFALPRYSDSAKV 60

Query: 61 SYVLQ 66
          +YVLQ
Sbjct: 61 AYVLQ 65

[Close]

BLAST of Bhi10G001639 vs. NCBI nr
Match: XP_011659088.1 (PREDICTED: 11S globulin seed storage protein 2-like isoform X2 [Cucumis sativus])

HSP 1 Score: 115.9 bits (289), Expect = 5.0e-23
Identity = 54/65 (83.08%), Postives = 57/65 (87.69%), Query Frame = 0


Query: 1  MDIDLAPQLPKKFYGGDGSSYYSWPPKELHMLHEGNIGASKLALEKNGFALPHYSDSAKV 60
          M+IDL PQLPKK YG DG SYY+W PKEL ML EGNIGASKLALEKNGFALP YSDSAKV
Sbjct: 1  MEIDLTPQLPKKIYGSDGGSYYAWSPKELPMLREGNIGASKLALEKNGFALPRYSDSAKV 60

Query: 61 SYVLQ 66
          +YVLQ
Sbjct: 61 AYVLQ 65

[Close]

BLAST of Bhi10G001639 vs. NCBI nr
Match: XP_022932087.1 (glutelin type-D 1-like [Cucurbita moschata])

HSP 1 Score: 115.5 bits (288), Expect = 6.6e-23
Identity = 54/65 (83.08%), Postives = 56/65 (86.15%), Query Frame = 0


Query: 1  MDIDLAPQLPKKFYGGDGSSYYSWPPKELHMLHEGNIGASKLALEKNGFALPHYSDSAKV 60
          MDIDL PQLPKK YGGDG SYYSW P EL ML  GNIGA+KLALEKNGFALP YSDSAKV
Sbjct: 1  MDIDLTPQLPKKLYGGDGGSYYSWSPAELPMLRHGNIGAAKLALEKNGFALPRYSDSAKV 60

Query: 61 SYVLQ 66
          +YVLQ
Sbjct: 61 AYVLQ 65

[Close]

BLAST of Bhi10G001639 vs. NCBI nr
Match: XP_022972918.1 (glutelin type-D 1-like [Cucurbita maxima])

HSP 1 Score: 115.5 bits (288), Expect = 6.6e-23
Identity = 54/65 (83.08%), Postives = 56/65 (86.15%), Query Frame = 0


Query: 1  MDIDLAPQLPKKFYGGDGSSYYSWPPKELHMLHEGNIGASKLALEKNGFALPHYSDSAKV 60
          MDIDL PQLPKK YGGDG SYYSW P EL ML  GNIGA+KLALEKNGFALP YSDSAKV
Sbjct: 1  MDIDLTPQLPKKLYGGDGGSYYSWSPAELPMLRHGNIGAAKLALEKNGFALPRYSDSAKV 60

Query: 61 SYVLQ 66
          +YVLQ
Sbjct: 61 AYVLQ 65

The following BLAST results are available for this feature:

BLAST of Bhi10G001639 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G07750.1	2.1e-23	72.31	RmlC-like cupins superfamily protein	[more]
AT2G28680.1	4.7e-23	72.31	RmlC-like cupins superfamily protein	[more]

BLAST of Bhi10G001639 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi10G001639 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CG59\|A0A1S3CG59_CUCME	3.0e-24	86.15	glutelin type-B 5-like OS=Cucumis melo OX=3656 GN=LOC103500083 PE=4 SV=1	[more]
tr\|A0A0A0K666\|A0A0A0K666_CUCSA	3.3e-23	83.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G281380 PE=4 SV=1	[more]
tr\|A0A1S2YJV5\|A0A1S2YJV5_CICAR	6.3e-22	80.00	glutelin type-A 2-like OS=Cicer arietinum OX=3827 GN=LOC101510077 PE=4 SV=1	[more]
tr\|A0A067L6Y6\|A0A067L6Y6_JATCU	1.4e-21	78.46	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_05649 PE=4 SV=1	[more]
tr\|A0A218W7R8\|A0A218W7R8_PUNGR	1.8e-21	78.46	Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr025022 PE=4 SV=1	[more]

BLAST of Bhi10G001639 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008461502.1	4.5e-24	86.15	PREDICTED: glutelin type-B 5-like [Cucumis melo]	[more]
XP_004150394.1	5.0e-23	83.08	PREDICTED: glutelin type-B 5-like isoform X1 [Cucumis sativus] >KGN44409.1 hypot...	[more]
XP_011659088.1	5.0e-23	83.08	PREDICTED: 11S globulin seed storage protein 2-like isoform X2 [Cucumis sativus]	[more]
XP_022932087.1	6.6e-23	83.08	glutelin type-D 1-like [Cucurbita moschata]	[more]
XP_022972918.1	6.6e-23	83.08	glutelin type-D 1-like [Cucurbita maxima]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0045735	nutrient reservoir activity

Vocabulary: **INTERPRO**
Term	Definition
IPR011051	RmlC_Cupin_sf
IPR014710	RmlC-like_jellyroll
IPR006045	Cupin_1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0045735	nutrient reservoir activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi10M001639	Bhi10M001639	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006045	Cupin 1	PFAM	PF00190	Cupin_1	coord: 10..65 e-value: 2.4E-8 score: 33.6
IPR014710	RmlC-like jelly roll fold	GENE3D	G3DSA:2.60.120.10		coord: 10..65 e-value: 1.3E-7 score: 33.2
None	No IPR available	PANTHER	PTHR31189:SF8	CUPIN FAMILY PROTEIN	coord: 1..65
None	No IPR available	PANTHER	PTHR31189	FAMILY NOT NAMED	coord: 1..65
IPR011051	RmlC-like cupin domain superfamily	SUPERFAMILY	SSF51182	RmlC-like cupins	coord: 9..65

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi10G001639	ClCG11G004550	Watermelon (Charleston Gray)	wcgwgoB167
Bhi10G001639	Cla016545	Watermelon (97103) v1	wgowmB406
Bhi10G001639	Cla97C11G211310	Watermelon (97103) v2	wgowmbB352

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi10G001639	Wax gourd	wgowgoB072
Bhi10G001639	Cucumber (Gy14) v1	cgywgoB173
Bhi10G001639	Cucumber (Gy14) v1	cgywgoB488
Bhi10G001639	Cucumber (Gy14) v2	cgybwgoB175
Bhi10G001639	Cucumber (Gy14) v2	cgybwgoB656
Bhi10G001639	Cucurbita maxima (Rimu)	cmawgoB0668
Bhi10G001639	Cucurbita maxima (Rimu)	cmawgoB0684
Bhi10G001639	Cucurbita maxima (Rimu)	cmawgoB0745
Bhi10G001639	Cucurbita moschata (Rifu)	cmowgoB0666
Bhi10G001639	Cucurbita moschata (Rifu)	cmowgoB0679
Bhi10G001639	Cucurbita moschata (Rifu)	cmowgoB0736
Bhi10G001639	Cucurbita pepo (Zucchini)	cpewgoB0338
Bhi10G001639	Cucurbita pepo (Zucchini)	cpewgoB0363
Bhi10G001639	Cucurbita pepo (Zucchini)	cpewgoB0864
Bhi10G001639	Cucurbita pepo (Zucchini)	cpewgoB0958
Bhi10G001639	Wild cucumber (PI 183967)	cpiwgoB181
Bhi10G001639	Wild cucumber (PI 183967)	cpiwgoB696
Bhi10G001639	Cucumber (Chinese Long) v3	cucwgoB187
Bhi10G001639	Cucumber (Chinese Long) v3	cucwgoB709
Bhi10G001639	Cucumber (Chinese Long) v2	cuwgoB182
Bhi10G001639	Cucumber (Chinese Long) v2	cuwgoB684
Bhi10G001639	Bottle gourd (USVL1VR-Ls)	lsiwgoB080
Bhi10G001639	Bottle gourd (USVL1VR-Ls)	lsiwgoB128
Bhi10G001639	Melon (DHL92) v3.6.1	medwgoB232
Bhi10G001639	Melon (DHL92) v3.5.1	mewgoB231
Bhi10G001639	Watermelon (Charleston Gray)	wcgwgoB286
Bhi10G001639	Watermelon (97103) v2	wgowmbB356
Bhi10G001639	Watermelon (97103) v1	wgowmB383
Bhi10G001639	Silver-seed gourd	carwgoB0931
Bhi10G001639	Silver-seed gourd	carwgoB1037