Bhi06M001557 (mRNA) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi06M001557
Type	mRNA
Organism	Benincasa hispida (Wax gourd)
Description	Photosystem II protein D1
Location	chr6 : 51140343 .. 51140612 (+)
Sequence length	270

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATTGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACAGAAACAATATTATTTCTGGTGCTATTATCCCTGCTTCTGCAGCTATTGGTTTGCACTTTTACCCAATTTGGGAAGTTGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATGGTTCTACACTTCTTACTTGATGTAGCATGTTAA

mRNA sequence

ATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATTGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACAGAAACAATATTATTTCTGGTGCTATTATCCCTGCTTCTGCAGCTATTGGTTTGCACTTTTACCCAATTTGGGAAGTTGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATGGTTCTACACTTCTTACTTGATGTAGCATGTTAA

Coding sequence (CDS)

ATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATTGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACAGAAACAATATTATTTCTGGTGCTATTATCCCTGCTTCTGCAGCTATTGGTTTGCACTTTTACCCAATTTGGGAAGTTGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATGGTTCTACACTTCTTACTTGATGTAGCATGTTAA

Protein sequence

MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYRNNIISGAIIPASAAIGLHFYPIWEVASVDEWLYNGGPYELMVLHFLLDVAC

Homology

[Close]

BLAST of Bhi06M001557 vs. Swiss-Prot
Match: sp|Q3V554|PSBA_ACOCL (Photosystem II protein D1 OS=Acorus calamus OX=4465 GN=psbA PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 7.7e-42
Identity = 84/89 (94.38%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1   MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYRNNIISGAIIPASAAIGLHFYPI 60
           MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY NNIISGAIIP SAAIGLHFYPI
Sbjct: 37  MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPI 96

Query: 61  WEVASVDEWLYNGGPYELMVLHFLLDVAC 90
           WE ASVDEWLYNGGPYEL+VLHFLL VAC
Sbjct: 97  WEAASVDEWLYNGGPYELIVLHFLLGVAC 125

[Close]

BLAST of Bhi06M001557 vs. Swiss-Prot
Match: sp|A4QJ96|PSBA_AETCO (Photosystem II protein D1 OS=Aethionema cordifolium OX=434059 GN=psbA PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 7.7e-42
Identity = 84/89 (94.38%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1   MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYRNNIISGAIIPASAAIGLHFYPI 60
           MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY NNIISGAIIP SAAIGLHFYPI
Sbjct: 37  MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPI 96

Query: 61  WEVASVDEWLYNGGPYELMVLHFLLDVAC 90
           WE ASVDEWLYNGGPYEL+VLHFLL VAC
Sbjct: 97  WEAASVDEWLYNGGPYELIVLHFLLGVAC 125

[Close]

BLAST of Bhi06M001557 vs. Swiss-Prot
Match: sp|A4QJI0|PSBA_AETGR (Photosystem II protein D1 OS=Aethionema grandiflorum OX=72657 GN=psbA PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 7.7e-42
Identity = 84/89 (94.38%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1   MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYRNNIISGAIIPASAAIGLHFYPI 60
           MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY NNIISGAIIP SAAIGLHFYPI
Sbjct: 37  MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPI 96

Query: 61  WEVASVDEWLYNGGPYELMVLHFLLDVAC 90
           WE ASVDEWLYNGGPYEL+VLHFLL VAC
Sbjct: 97  WEAASVDEWLYNGGPYELIVLHFLLGVAC 125

[Close]

BLAST of Bhi06M001557 vs. Swiss-Prot
Match: sp|A1E9Y8|PSBA_AGRST (Photosystem II protein D1 OS=Agrostis stolonifera OX=63632 GN=psbA PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 7.7e-42
Identity = 84/89 (94.38%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1   MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYRNNIISGAIIPASAAIGLHFYPI 60
           MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY NNIISGAIIP SAAIGLHFYPI
Sbjct: 37  MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPI 96

Query: 61  WEVASVDEWLYNGGPYELMVLHFLLDVAC 90
           WE ASVDEWLYNGGPYEL+VLHFLL VAC
Sbjct: 97  WEAASVDEWLYNGGPYELIVLHFLLGVAC 125

[Close]

BLAST of Bhi06M001557 vs. Swiss-Prot
Match: sp|P02956|PSBA_AMAHY (Photosystem II protein D1 OS=Amaranthus hybridus OX=3565 GN=psbA PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 7.7e-42
Identity = 84/89 (94.38%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1   MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYRNNIISGAIIPASAAIGLHFYPI 60
           MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY NNIISGAIIP SAAIGLHFYPI
Sbjct: 37  MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPI 96

Query: 61  WEVASVDEWLYNGGPYELMVLHFLLDVAC 90
           WE ASVDEWLYNGGPYEL+VLHFLL VAC
Sbjct: 97  WEAASVDEWLYNGGPYELIVLHFLLGVAC 125

[Close]

BLAST of Bhi06M001557 vs. TAIR10
Match: ATCG00020.1 (photosystem II reaction center protein A)

HSP 1 Score: 170.6 bits (431), Expect = 4.3e-43
Identity = 84/89 (94.38%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1   MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYRNNIISGAIIPASAAIGLHFYPI 60
           MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY NNIISGAIIP SAAIGLHFYPI
Sbjct: 37  MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPI 96

Query: 61  WEVASVDEWLYNGGPYELMVLHFLLDVAC 90
           WE ASVDEWLYNGGPYEL+VLHFLL VAC
Sbjct: 97  WEAASVDEWLYNGGPYELIVLHFLLGVAC 125

[Close]

BLAST of Bhi06M001557 vs. TrEMBL
Match: tr|A0A0A0UU45|A0A0A0UU45_9ASPA (Photosystem II protein D1 OS=Corallorhiza maculata var. mexicana OX=512271 GN=psbA PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 7.0e-40
Identity = 84/89 (94.38%), Postives = 86/89 (96.63%), Query Frame = 0


Query: 1   MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYRNNIISGAIIPASAAIGLHFYPI 60
           MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY NNIISGAIIPASAAIGLHFYPI
Sbjct: 37  MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPASAAIGLHFYPI 96

Query: 61  WEVASVDEWLYNGGPYELMVLHFLLDVAC 90
           WE ASVDEWLYNGGPYEL+VLHFLL +AC
Sbjct: 97  WEAASVDEWLYNGGPYELIVLHFLLGIAC 125

[Close]

BLAST of Bhi06M001557 vs. TrEMBL
Match: tr|A0A221HMF3|A0A221HMF3_9ERIC (Photosystem II protein D1 OS=Pyrenaria spectabilis var. greeniae OX=197092 GN=psbA PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.6e-39
Identity = 84/89 (94.38%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1   MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYRNNIISGAIIPASAAIGLHFYPI 60
           MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY NNIISGAIIP SAAIGLHFYPI
Sbjct: 37  MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPI 96

Query: 61  WEVASVDEWLYNGGPYELMVLHFLLDVAC 90
           WE ASVDEWLYNGGPYEL+VLHFLL VAC
Sbjct: 97  WEAASVDEWLYNGGPYELIVLHFLLGVAC 125

[Close]

BLAST of Bhi06M001557 vs. TrEMBL
Match: tr|A0A2P1AEC5|A0A2P1AEC5_9MAGN (Photosystem II protein D1 OS=Parrotia subaequalis OX=64134 GN=psbA PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.6e-39
Identity = 84/89 (94.38%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1   MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYRNNIISGAIIPASAAIGLHFYPI 60
           MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY NNIISGAIIP SAAIGLHFYPI
Sbjct: 37  MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPI 96

Query: 61  WEVASVDEWLYNGGPYELMVLHFLLDVAC 90
           WE ASVDEWLYNGGPYEL+VLHFLL VAC
Sbjct: 97  WEAASVDEWLYNGGPYELIVLHFLLGVAC 125

[Close]

BLAST of Bhi06M001557 vs. TrEMBL
Match: tr|A0A140G1P2|A0A140G1P2_TOBAC (Photosystem II protein D1 OS=Nicotiana tabacum OX=4097 GN=psbA PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.6e-39
Identity = 84/89 (94.38%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1   MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYRNNIISGAIIPASAAIGLHFYPI 60
           MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY NNIISGAIIP SAAIGLHFYPI
Sbjct: 37  MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPI 96

Query: 61  WEVASVDEWLYNGGPYELMVLHFLLDVAC 90
           WE ASVDEWLYNGGPYEL+VLHFLL VAC
Sbjct: 97  WEAASVDEWLYNGGPYELIVLHFLLGVAC 125

[Close]

BLAST of Bhi06M001557 vs. TrEMBL
Match: tr|A0A059P2J4|A0A059P2J4_9GENT (Photosystem II protein D1 OS=Asclepias coulteri OX=659948 GN=psbA PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.6e-39
Identity = 84/89 (94.38%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1   MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYRNNIISGAIIPASAAIGLHFYPI 60
           MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY NNIISGAIIP SAAIGLHFYPI
Sbjct: 37  MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPI 96

Query: 61  WEVASVDEWLYNGGPYELMVLHFLLDVAC 90
           WE ASVDEWLYNGGPYEL+VLHFLL VAC
Sbjct: 97  WEAASVDEWLYNGGPYELIVLHFLLGVAC 125

[Close]

BLAST of Bhi06M001557 vs. NCBI nr
Match: AIW51318.1 (photosystem II protein D1 (plastid) [Corallorhiza maculata var. mexicana])

HSP 1 Score: 171.8 bits (434), Expect = 1.1e-39
Identity = 84/89 (94.38%), Postives = 86/89 (96.63%), Query Frame = 0


Query: 1   MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYRNNIISGAIIPASAAIGLHFYPI 60
           MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY NNIISGAIIPASAAIGLHFYPI
Sbjct: 37  MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPASAAIGLHFYPI 96

Query: 61  WEVASVDEWLYNGGPYELMVLHFLLDVAC 90
           WE ASVDEWLYNGGPYEL+VLHFLL +AC
Sbjct: 97  WEAASVDEWLYNGGPYELIVLHFLLGIAC 125

[Close]

BLAST of Bhi06M001557 vs. NCBI nr
Match: AAK50366.1 (Q(B) polypeptide, partial (chloroplast) [Medicago sativa])

HSP 1 Score: 170.6 bits (431), Expect = 2.4e-39
Identity = 84/89 (94.38%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1   MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYRNNIISGAIIPASAAIGLHFYPI 60
           MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY NNIISGAIIP SAAIGLHFYPI
Sbjct: 24  MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPI 83

Query: 61  WEVASVDEWLYNGGPYELMVLHFLLDVAC 90
           WE ASVDEWLYNGGPYEL+VLHFLL VAC
Sbjct: 84  WEAASVDEWLYNGGPYELIVLHFLLGVAC 112

[Close]

BLAST of Bhi06M001557 vs. NCBI nr
Match: BAA82767.1 (psbA [Conocephalum conicum])

HSP 1 Score: 170.6 bits (431), Expect = 2.4e-39
Identity = 84/89 (94.38%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1   MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYRNNIISGAIIPASAAIGLHFYPI 60
           MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY NNIISGAIIP SAAIGLHFYPI
Sbjct: 37  MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPI 96

Query: 61  WEVASVDEWLYNGGPYELMVLHFLLDVAC 90
           WE ASVDEWLYNGGPYEL+VLHFLL VAC
Sbjct: 97  WEAASVDEWLYNGGPYELIVLHFLLGVAC 125

[Close]

BLAST of Bhi06M001557 vs. NCBI nr
Match: AAM34438.1 (photosystem II protein D1, partial (chloroplast) [Olea europaea])

HSP 1 Score: 170.6 bits (431), Expect = 2.4e-39
Identity = 84/89 (94.38%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1   MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYRNNIISGAIIPASAAIGLHFYPI 60
           MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY NNIISGAIIP SAAIGLHFYPI
Sbjct: 13  MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPI 72

Query: 61  WEVASVDEWLYNGGPYELMVLHFLLDVAC 90
           WE ASVDEWLYNGGPYEL+VLHFLL VAC
Sbjct: 73  WEAASVDEWLYNGGPYELIVLHFLLGVAC 101

[Close]

BLAST of Bhi06M001557 vs. NCBI nr
Match: AAM34437.1 (photosystem II protein D1, partial (chloroplast) [Citrus reticulata])

HSP 1 Score: 170.6 bits (431), Expect = 2.4e-39
Identity = 84/89 (94.38%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1   MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYRNNIISGAIIPASAAIGLHFYPI 60
           MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY NNIISGAIIP SAAIGLHFYPI
Sbjct: 12  MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPI 71

Query: 61  WEVASVDEWLYNGGPYELMVLHFLLDVAC 90
           WE ASVDEWLYNGGPYEL+VLHFLL VAC
Sbjct: 72  WEAASVDEWLYNGGPYELIVLHFLLGVAC 100

The following BLAST results are available for this feature:

BLAST of Bhi06M001557 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q3V554\|PSBA_ACOCL	7.7e-42	94.38	Photosystem II protein D1 OS=Acorus calamus OX=4465 GN=psbA PE=3 SV=1	[more]
sp\|A4QJ96\|PSBA_AETCO	7.7e-42	94.38	Photosystem II protein D1 OS=Aethionema cordifolium OX=434059 GN=psbA PE=3 SV=1	[more]
sp\|A4QJI0\|PSBA_AETGR	7.7e-42	94.38	Photosystem II protein D1 OS=Aethionema grandiflorum OX=72657 GN=psbA PE=3 SV=1	[more]
sp\|A1E9Y8\|PSBA_AGRST	7.7e-42	94.38	Photosystem II protein D1 OS=Agrostis stolonifera OX=63632 GN=psbA PE=3 SV=1	[more]
sp\|P02956\|PSBA_AMAHY	7.7e-42	94.38	Photosystem II protein D1 OS=Amaranthus hybridus OX=3565 GN=psbA PE=3 SV=1	[more]

BLAST of Bhi06M001557 vs. TAIR10


Match Name	E-value	Identity	Description
ATCG00020.1	4.3e-43	94.38	photosystem II reaction center protein A	[more]

BLAST of Bhi06M001557 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0UU45\|A0A0A0UU45_9ASPA	7.0e-40	94.38	Photosystem II protein D1 OS=Corallorhiza maculata var. mexicana OX=512271 GN=ps...	[more]
tr\|A0A221HMF3\|A0A221HMF3_9ERIC	1.6e-39	94.38	Photosystem II protein D1 OS=Pyrenaria spectabilis var. greeniae OX=197092 GN=ps...	[more]
tr\|A0A2P1AEC5\|A0A2P1AEC5_9MAGN	1.6e-39	94.38	Photosystem II protein D1 OS=Parrotia subaequalis OX=64134 GN=psbA PE=3 SV=1	[more]
tr\|A0A140G1P2\|A0A140G1P2_TOBAC	1.6e-39	94.38	Photosystem II protein D1 OS=Nicotiana tabacum OX=4097 GN=psbA PE=3 SV=1	[more]
tr\|A0A059P2J4\|A0A059P2J4_9GENT	1.6e-39	94.38	Photosystem II protein D1 OS=Asclepias coulteri OX=659948 GN=psbA PE=3 SV=1	[more]

BLAST of Bhi06M001557 vs. NCBI nr


Match Name	E-value	Identity	Description
AIW51318.1	1.1e-39	94.38	photosystem II protein D1 (plastid) [Corallorhiza maculata var. mexicana]	[more]
AAK50366.1	2.4e-39	94.38	Q(B) polypeptide, partial (chloroplast) [Medicago sativa]	[more]
BAA82767.1	2.4e-39	94.38	psbA [Conocephalum conicum]	[more]
AAM34438.1	2.4e-39	94.38	photosystem II protein D1, partial (chloroplast) [Olea europaea]	[more]
AAM34437.1	2.4e-39	94.38	photosystem II protein D1, partial (chloroplast) [Citrus reticulata]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Biological Process**
Term	Definition
GO:0009772	photosynthetic electron transport in photosystem II
GO:0019684	photosynthesis, light reaction

Vocabulary: **Molecular Function**
Term	Definition
GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity

Vocabulary: **INTERPRO**
Term	Definition
IPR036854	Photo_II_D1/D2_sf
IPR000484	Photo_RC_L/M

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019684	photosynthesis, light reaction
biological_process	GO:0009772	photosynthetic electron transport in photosystem II
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009635	response to herbicide
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009523	photosystem II
molecular_function	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi06G001557	Bhi06G001557	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi06M001557.exon1	Bhi06M001557.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi06M001557	cds.Bhi06M001557	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi06M001557	Bhi06M001557-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000484	Photosynthetic reaction centre, L/M	PFAM	PF00124	Photo_RC	coord: 1..89 e-value: 5.0E-16 score: 58.6
IPR000484	Photosynthetic reaction centre, L/M	PANTHER	PTHR33149	FAMILY NOT NAMED	coord: 1..89
None	No IPR available	PANTHER	PTHR33149:SF11	PHOTOSYSTEM II PROTEIN D1	coord: 1..89
IPR036854	Photosystem II protein D1/D2 superfamily	SUPERFAMILY	SSF81483	Bacterial photosystem II reaction centre, L and M subunits	coord: 1..89