Bhi06G001557 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi06G001557
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Photosystem II protein D1
Location	chr6 : 51140343 .. 51140612 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATTGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACAGAAACAATATTATTTCTGGTGCTATTATCCCTGCTTCTGCAGCTATTGGTTTGCACTTTTACCCAATTTGGGAAGTTGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATGGTTCTACACTTCTTACTTGATGTAGCATGTTAA

mRNA sequence

ATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATTGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACAGAAACAATATTATTTCTGGTGCTATTATCCCTGCTTCTGCAGCTATTGGTTTGCACTTTTACCCAATTTGGGAAGTTGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATGGTTCTACACTTCTTACTTGATGTAGCATGTTAA

Coding sequence (CDS)

ATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATTGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACAGAAACAATATTATTTCTGGTGCTATTATCCCTGCTTCTGCAGCTATTGGTTTGCACTTTTACCCAATTTGGGAAGTTGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATGGTTCTACACTTCTTACTTGATGTAGCATGTTAA

Protein sequence

MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYRNNIISGAIIPASAAIGLHFYPIWEVASVDEWLYNGGPYELMVLHFLLDVAC

Homology

[Close]

BLAST of Bhi06G001557 vs. Swiss-Prot
Match: sp|Q3V554|PSBA_ACOCL (Photosystem II protein D1 OS=Acorus calamus OX=4465 GN=psbA PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 7.7e-42
Identity = 84/89 (94.38%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1   MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYRNNIISGAIIPASAAIGLHFYPI 60
           MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY NNIISGAIIP SAAIGLHFYPI
Sbjct: 37  MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPI 96

Query: 61  WEVASVDEWLYNGGPYELMVLHFLLDVAC 90
           WE ASVDEWLYNGGPYEL+VLHFLL VAC
Sbjct: 97  WEAASVDEWLYNGGPYELIVLHFLLGVAC 125

[Close]

BLAST of Bhi06G001557 vs. Swiss-Prot
Match: sp|A4QJ96|PSBA_AETCO (Photosystem II protein D1 OS=Aethionema cordifolium OX=434059 GN=psbA PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 7.7e-42
Identity = 84/89 (94.38%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1   MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYRNNIISGAIIPASAAIGLHFYPI 60
           MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY NNIISGAIIP SAAIGLHFYPI
Sbjct: 37  MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPI 96

Query: 61  WEVASVDEWLYNGGPYELMVLHFLLDVAC 90
           WE ASVDEWLYNGGPYEL+VLHFLL VAC
Sbjct: 97  WEAASVDEWLYNGGPYELIVLHFLLGVAC 125

[Close]

BLAST of Bhi06G001557 vs. Swiss-Prot
Match: sp|A4QJI0|PSBA_AETGR (Photosystem II protein D1 OS=Aethionema grandiflorum OX=72657 GN=psbA PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 7.7e-42
Identity = 84/89 (94.38%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1   MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYRNNIISGAIIPASAAIGLHFYPI 60
           MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY NNIISGAIIP SAAIGLHFYPI
Sbjct: 37  MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPI 96

Query: 61  WEVASVDEWLYNGGPYELMVLHFLLDVAC 90
           WE ASVDEWLYNGGPYEL+VLHFLL VAC
Sbjct: 97  WEAASVDEWLYNGGPYELIVLHFLLGVAC 125

[Close]

BLAST of Bhi06G001557 vs. Swiss-Prot
Match: sp|A1E9Y8|PSBA_AGRST (Photosystem II protein D1 OS=Agrostis stolonifera OX=63632 GN=psbA PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 7.7e-42
Identity = 84/89 (94.38%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1   MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYRNNIISGAIIPASAAIGLHFYPI 60
           MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY NNIISGAIIP SAAIGLHFYPI
Sbjct: 37  MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPI 96

Query: 61  WEVASVDEWLYNGGPYELMVLHFLLDVAC 90
           WE ASVDEWLYNGGPYEL+VLHFLL VAC
Sbjct: 97  WEAASVDEWLYNGGPYELIVLHFLLGVAC 125

[Close]

BLAST of Bhi06G001557 vs. Swiss-Prot
Match: sp|P02956|PSBA_AMAHY (Photosystem II protein D1 OS=Amaranthus hybridus OX=3565 GN=psbA PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 7.7e-42
Identity = 84/89 (94.38%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1   MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYRNNIISGAIIPASAAIGLHFYPI 60
           MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY NNIISGAIIP SAAIGLHFYPI
Sbjct: 37  MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPI 96

Query: 61  WEVASVDEWLYNGGPYELMVLHFLLDVAC 90
           WE ASVDEWLYNGGPYEL+VLHFLL VAC
Sbjct: 97  WEAASVDEWLYNGGPYELIVLHFLLGVAC 125

[Close]

BLAST of Bhi06G001557 vs. TAIR10
Match: ATCG00020.1 (photosystem II reaction center protein A)

HSP 1 Score: 170.6 bits (431), Expect = 4.3e-43
Identity = 84/89 (94.38%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1   MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYRNNIISGAIIPASAAIGLHFYPI 60
           MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY NNIISGAIIP SAAIGLHFYPI
Sbjct: 37  MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPI 96

Query: 61  WEVASVDEWLYNGGPYELMVLHFLLDVAC 90
           WE ASVDEWLYNGGPYEL+VLHFLL VAC
Sbjct: 97  WEAASVDEWLYNGGPYELIVLHFLLGVAC 125

[Close]

BLAST of Bhi06G001557 vs. TrEMBL
Match: tr|A0A0A0UU45|A0A0A0UU45_9ASPA (Photosystem II protein D1 OS=Corallorhiza maculata var. mexicana OX=512271 GN=psbA PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 7.0e-40
Identity = 84/89 (94.38%), Postives = 86/89 (96.63%), Query Frame = 0


Query: 1   MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYRNNIISGAIIPASAAIGLHFYPI 60
           MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY NNIISGAIIPASAAIGLHFYPI
Sbjct: 37  MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPASAAIGLHFYPI 96

Query: 61  WEVASVDEWLYNGGPYELMVLHFLLDVAC 90
           WE ASVDEWLYNGGPYEL+VLHFLL +AC
Sbjct: 97  WEAASVDEWLYNGGPYELIVLHFLLGIAC 125

[Close]

BLAST of Bhi06G001557 vs. TrEMBL
Match: tr|A0A221HMF3|A0A221HMF3_9ERIC (Photosystem II protein D1 OS=Pyrenaria spectabilis var. greeniae OX=197092 GN=psbA PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.6e-39
Identity = 84/89 (94.38%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1   MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYRNNIISGAIIPASAAIGLHFYPI 60
           MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY NNIISGAIIP SAAIGLHFYPI
Sbjct: 37  MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPI 96

Query: 61  WEVASVDEWLYNGGPYELMVLHFLLDVAC 90
           WE ASVDEWLYNGGPYEL+VLHFLL VAC
Sbjct: 97  WEAASVDEWLYNGGPYELIVLHFLLGVAC 125

[Close]

BLAST of Bhi06G001557 vs. TrEMBL
Match: tr|A0A2P1AEC5|A0A2P1AEC5_9MAGN (Photosystem II protein D1 OS=Parrotia subaequalis OX=64134 GN=psbA PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.6e-39
Identity = 84/89 (94.38%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1   MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYRNNIISGAIIPASAAIGLHFYPI 60
           MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY NNIISGAIIP SAAIGLHFYPI
Sbjct: 37  MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPI 96

Query: 61  WEVASVDEWLYNGGPYELMVLHFLLDVAC 90
           WE ASVDEWLYNGGPYEL+VLHFLL VAC
Sbjct: 97  WEAASVDEWLYNGGPYELIVLHFLLGVAC 125

[Close]

BLAST of Bhi06G001557 vs. TrEMBL
Match: tr|A0A140G1P2|A0A140G1P2_TOBAC (Photosystem II protein D1 OS=Nicotiana tabacum OX=4097 GN=psbA PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.6e-39
Identity = 84/89 (94.38%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1   MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYRNNIISGAIIPASAAIGLHFYPI 60
           MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY NNIISGAIIP SAAIGLHFYPI
Sbjct: 37  MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPI 96

Query: 61  WEVASVDEWLYNGGPYELMVLHFLLDVAC 90
           WE ASVDEWLYNGGPYEL+VLHFLL VAC
Sbjct: 97  WEAASVDEWLYNGGPYELIVLHFLLGVAC 125

[Close]

BLAST of Bhi06G001557 vs. TrEMBL
Match: tr|A0A059P2J4|A0A059P2J4_9GENT (Photosystem II protein D1 OS=Asclepias coulteri OX=659948 GN=psbA PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.6e-39
Identity = 84/89 (94.38%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1   MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYRNNIISGAIIPASAAIGLHFYPI 60
           MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY NNIISGAIIP SAAIGLHFYPI
Sbjct: 37  MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPI 96

Query: 61  WEVASVDEWLYNGGPYELMVLHFLLDVAC 90
           WE ASVDEWLYNGGPYEL+VLHFLL VAC
Sbjct: 97  WEAASVDEWLYNGGPYELIVLHFLLGVAC 125

[Close]

BLAST of Bhi06G001557 vs. NCBI nr
Match: AIW51318.1 (photosystem II protein D1 (plastid) [Corallorhiza maculata var. mexicana])

HSP 1 Score: 171.8 bits (434), Expect = 1.1e-39
Identity = 84/89 (94.38%), Postives = 86/89 (96.63%), Query Frame = 0


Query: 1   MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYRNNIISGAIIPASAAIGLHFYPI 60
           MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY NNIISGAIIPASAAIGLHFYPI
Sbjct: 37  MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPASAAIGLHFYPI 96

Query: 61  WEVASVDEWLYNGGPYELMVLHFLLDVAC 90
           WE ASVDEWLYNGGPYEL+VLHFLL +AC
Sbjct: 97  WEAASVDEWLYNGGPYELIVLHFLLGIAC 125

[Close]

BLAST of Bhi06G001557 vs. NCBI nr
Match: AAK50366.1 (Q(B) polypeptide, partial (chloroplast) [Medicago sativa])

HSP 1 Score: 170.6 bits (431), Expect = 2.4e-39
Identity = 84/89 (94.38%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1   MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYRNNIISGAIIPASAAIGLHFYPI 60
           MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY NNIISGAIIP SAAIGLHFYPI
Sbjct: 24  MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPI 83

Query: 61  WEVASVDEWLYNGGPYELMVLHFLLDVAC 90
           WE ASVDEWLYNGGPYEL+VLHFLL VAC
Sbjct: 84  WEAASVDEWLYNGGPYELIVLHFLLGVAC 112

[Close]

BLAST of Bhi06G001557 vs. NCBI nr
Match: BAA82767.1 (psbA [Conocephalum conicum])

HSP 1 Score: 170.6 bits (431), Expect = 2.4e-39
Identity = 84/89 (94.38%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1   MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYRNNIISGAIIPASAAIGLHFYPI 60
           MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY NNIISGAIIP SAAIGLHFYPI
Sbjct: 37  MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPI 96

Query: 61  WEVASVDEWLYNGGPYELMVLHFLLDVAC 90
           WE ASVDEWLYNGGPYEL+VLHFLL VAC
Sbjct: 97  WEAASVDEWLYNGGPYELIVLHFLLGVAC 125

[Close]

BLAST of Bhi06G001557 vs. NCBI nr
Match: AAM34438.1 (photosystem II protein D1, partial (chloroplast) [Olea europaea])

HSP 1 Score: 170.6 bits (431), Expect = 2.4e-39
Identity = 84/89 (94.38%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1   MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYRNNIISGAIIPASAAIGLHFYPI 60
           MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY NNIISGAIIP SAAIGLHFYPI
Sbjct: 13  MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPI 72

Query: 61  WEVASVDEWLYNGGPYELMVLHFLLDVAC 90
           WE ASVDEWLYNGGPYEL+VLHFLL VAC
Sbjct: 73  WEAASVDEWLYNGGPYELIVLHFLLGVAC 101

[Close]

BLAST of Bhi06G001557 vs. NCBI nr
Match: AAM34437.1 (photosystem II protein D1, partial (chloroplast) [Citrus reticulata])

HSP 1 Score: 170.6 bits (431), Expect = 2.4e-39
Identity = 84/89 (94.38%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1   MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYRNNIISGAIIPASAAIGLHFYPI 60
           MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY NNIISGAIIP SAAIGLHFYPI
Sbjct: 12  MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPI 71

Query: 61  WEVASVDEWLYNGGPYELMVLHFLLDVAC 90
           WE ASVDEWLYNGGPYEL+VLHFLL VAC
Sbjct: 72  WEAASVDEWLYNGGPYELIVLHFLLGVAC 100

The following BLAST results are available for this feature:

BLAST of Bhi06G001557 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q3V554\|PSBA_ACOCL	7.7e-42	94.38	Photosystem II protein D1 OS=Acorus calamus OX=4465 GN=psbA PE=3 SV=1	[more]
sp\|A4QJ96\|PSBA_AETCO	7.7e-42	94.38	Photosystem II protein D1 OS=Aethionema cordifolium OX=434059 GN=psbA PE=3 SV=1	[more]
sp\|A4QJI0\|PSBA_AETGR	7.7e-42	94.38	Photosystem II protein D1 OS=Aethionema grandiflorum OX=72657 GN=psbA PE=3 SV=1	[more]
sp\|A1E9Y8\|PSBA_AGRST	7.7e-42	94.38	Photosystem II protein D1 OS=Agrostis stolonifera OX=63632 GN=psbA PE=3 SV=1	[more]
sp\|P02956\|PSBA_AMAHY	7.7e-42	94.38	Photosystem II protein D1 OS=Amaranthus hybridus OX=3565 GN=psbA PE=3 SV=1	[more]

BLAST of Bhi06G001557 vs. TAIR10


Match Name	E-value	Identity	Description
ATCG00020.1	4.3e-43	94.38	photosystem II reaction center protein A	[more]

BLAST of Bhi06G001557 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0UU45\|A0A0A0UU45_9ASPA	7.0e-40	94.38	Photosystem II protein D1 OS=Corallorhiza maculata var. mexicana OX=512271 GN=ps...	[more]
tr\|A0A221HMF3\|A0A221HMF3_9ERIC	1.6e-39	94.38	Photosystem II protein D1 OS=Pyrenaria spectabilis var. greeniae OX=197092 GN=ps...	[more]
tr\|A0A2P1AEC5\|A0A2P1AEC5_9MAGN	1.6e-39	94.38	Photosystem II protein D1 OS=Parrotia subaequalis OX=64134 GN=psbA PE=3 SV=1	[more]
tr\|A0A140G1P2\|A0A140G1P2_TOBAC	1.6e-39	94.38	Photosystem II protein D1 OS=Nicotiana tabacum OX=4097 GN=psbA PE=3 SV=1	[more]
tr\|A0A059P2J4\|A0A059P2J4_9GENT	1.6e-39	94.38	Photosystem II protein D1 OS=Asclepias coulteri OX=659948 GN=psbA PE=3 SV=1	[more]

BLAST of Bhi06G001557 vs. NCBI nr


Match Name	E-value	Identity	Description
AIW51318.1	1.1e-39	94.38	photosystem II protein D1 (plastid) [Corallorhiza maculata var. mexicana]	[more]
AAK50366.1	2.4e-39	94.38	Q(B) polypeptide, partial (chloroplast) [Medicago sativa]	[more]
BAA82767.1	2.4e-39	94.38	psbA [Conocephalum conicum]	[more]
AAM34438.1	2.4e-39	94.38	photosystem II protein D1, partial (chloroplast) [Olea europaea]	[more]
AAM34437.1	2.4e-39	94.38	photosystem II protein D1, partial (chloroplast) [Citrus reticulata]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0009772	photosynthetic electron transport in photosystem II
GO:0019684	photosynthesis, light reaction

Vocabulary: **Molecular Function**
Term	Definition
GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity

Vocabulary: **INTERPRO**
Term	Definition
IPR036854	Photo_II_D1/D2_sf
IPR000484	Photo_RC_L/M

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009772	photosynthetic electron transport in photosystem II
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009635	response to herbicide
biological_process	GO:0019684	photosynthesis, light reaction
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009523	photosystem II
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi06M001557	Bhi06M001557	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000484	Photosynthetic reaction centre, L/M	PFAM	PF00124	Photo_RC	coord: 1..89 e-value: 5.0E-16 score: 58.6
IPR000484	Photosynthetic reaction centre, L/M	PANTHER	PTHR33149	FAMILY NOT NAMED	coord: 1..89
None	No IPR available	PANTHER	PTHR33149:SF11	PHOTOSYSTEM II PROTEIN D1	coord: 1..89
IPR036854	Photosystem II protein D1/D2 superfamily	SUPERFAMILY	SSF81483	Bacterial photosystem II reaction centre, L and M subunits	coord: 1..89

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi06G001557	Cucumber (Gy14) v1	cgywgoB250
Bhi06G001557	Cucumber (Gy14) v1	cgywgoB251
Bhi06G001557	Cucumber (Gy14) v2	cgybwgoB130
Bhi06G001557	Cucumber (Gy14) v2	cgybwgoB133
Bhi06G001557	Cucurbita maxima (Rimu)	cmawgoB0177
Bhi06G001557	Cucurbita maxima (Rimu)	cmawgoB0192
Bhi06G001557	Cucurbita maxima (Rimu)	cmawgoB0917
Bhi06G001557	Cucurbita maxima (Rimu)	cmawgoB0933
Bhi06G001557	Cucurbita moschata (Rifu)	cmowgoB0171
Bhi06G001557	Cucurbita moschata (Rifu)	cmowgoB0187
Bhi06G001557	Cucurbita moschata (Rifu)	cmowgoB0934
Bhi06G001557	Cucurbita moschata (Rifu)	cmowgoB0919
Bhi06G001557	Cucurbita pepo (Zucchini)	cpewgoB0130
Bhi06G001557	Cucurbita moschata (Rifu)	cmowgoB1101
Bhi06G001557	Cucurbita pepo (Zucchini)	cpewgoB0114
Bhi06G001557	Cucurbita pepo (Zucchini)	cpewgoB1006
Bhi06G001557	Cucurbita pepo (Zucchini)	cpewgoB1025
Bhi06G001557	Wild cucumber (PI 183967)	cpiwgoB135
Bhi06G001557	Wild cucumber (PI 183967)	cpiwgoB137
Bhi06G001557	Cucumber (Chinese Long) v3	cucwgoB142
Bhi06G001557	Cucumber (Chinese Long) v3	cucwgoB144
Bhi06G001557	Cucumber (Chinese Long) v2	cuwgoB134
Bhi06G001557	Bottle gourd (USVL1VR-Ls)	lsiwgoB106
Bhi06G001557	Bottle gourd (USVL1VR-Ls)	lsiwgoB108
Bhi06G001557	Melon (DHL92) v3.6.1	medwgoB457
Bhi06G001557	Melon (DHL92) v3.6.1	medwgoB469
Bhi06G001557	Melon (DHL92) v3.5.1	mewgoB454
Bhi06G001557	Melon (DHL92) v3.5.1	mewgoB466
Bhi06G001557	Watermelon (Charleston Gray)	wcgwgoB260
Bhi06G001557	Watermelon (Charleston Gray)	wcgwgoB263
Bhi06G001557	Watermelon (97103) v2	wgowmbB128
Bhi06G001557	Watermelon (97103) v2	wgowmbB132
Bhi06G001557	Watermelon (97103) v1	wgowmB133
Bhi06G001557	Watermelon (97103) v1	wgowmB136
Bhi06G001557	Silver-seed gourd	carwgoB0331
Bhi06G001557	Silver-seed gourd	carwgoB0333
Bhi06G001557	Silver-seed gourd	carwgoB1260
Bhi06G001557	Silver-seed gourd	carwgoB1261