Bhi06M000742 (mRNA) Wax gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGAGAAAATGCCAGAGGGACACACTGCTATCCTCAACTCTGGCACTGTTTTTGGGCAAAATGGTAGTAATTTCAACCAGCTTTCCACTGAGAGCCTTTCAATGAGCATAAACTCTCGTTTGGAGTCTAATGGCATTTCAAAATGTCAAACCTTATCAACTGGAAGCAAAGTACAAAATGAGAAGGCAGAATGGGTTGTACAAGACGAACCAGGTGTGTACATAACTCTATCTGCTTTGCCAGGAGGATGCAATGAGCTGAAACGAGTTCGTTTCAGGTACTAAATTTAGCTCACTTTTTTGTGAAAGTTTATTGACGCTTACATGGCATTAAAATCAATCTTGTTTCATCATCCAACTGTATTCCTTTGTAATGCCTATGTCATCAATCCATATCTTTCTAATGCTGATTGTTGAAATTCCTTACCTCATCGTAATCCCCATAACTTAATACTTAAGTTGACGCCTTATTACCCAATGTACGCTTGTGTTGTCTAATAAAAATATTTTGTTTCCTATCATAAAAGATAAAAATTTGAAGGTTTGTTTGGAAAACTGTTTGAAATATATATATATATGTATGTATGTATGTATATATTAATAGCTTTGTGATAGGAAACCGTTATTGTGTAGGTTAAAGTTACCCACTCCTTGGTTTCTTGTTTACTTCTAAAAAATCTGTTTTTTAAAAAAAATAAATTTCATCGATAATGGTAATACCAGTTAATAGACTCCCAACTTCCCATAGGTATATTGAAACAGTCGATGTAAGTAGAGTATTGAAACTATATTGAAAAGATTACATTTACTCTAAACTTTTTGACCTATCAACTTAAGCTTTTTAGTCTAGTGATATATCGTGTTTACATAGAAATATTCCTTATTCATATTTAGGAGTATCCACGATGGTGAGTGTTGTAAATATATTTGGATGATAATCTAAGATTATCCTAACCTGCTGTTTTAGGTTAGCTTAAGATAAGTTTAATCTTTCCAATATCTTCTCAACAAGTAATGCTTTTTTTTTCTCTCTTTTATTGAACTTGTTCACTGCCTGCTTGGGCTATCAGTACGAAAGTTTGTTACGGTTCAATTTAAAGTCAATAATGTCACTGATTCAGTTGTTTTTTTTCCTTTTCTTTTTTTCCTTCCCCTCTCTCTATTCTATCCACTTAAGTGTAATAGGCACCTATATATACAAAATCAAGCAGCCCTGCTTGCATATTGTTGCTATTATGAAAGACCAACAATCTCATTATGAGTTAACTAGTAAAGCAAAGCATATGTTCTCAGTTTTCCTGTGTTGAAAATTGTGTTGCAGTCGAAGACATTTCACAGAAGCACAAGCAGAGAAATGGTGGGCGGAATTCGGAGCGAAGGTTTGTGAGCGGCATAAA ATGGCTGAGAAAATGCCAGAGGGACACACTGCTATCCTCAACTCTGGCACTGTTTTTGGGCAAAATGGTAGTAATTTCAACCAGCTTTCCACTGAGAGCCTTTCAATGAGCATAAACTCTCGTTTGGAGTCTAATGGCATTTCAAAATGTCAAACCTTATCAACTGGAAGCAAAGTACAAAATGAGAAGGCAGAATGGGTTGTACAAGACGAACCAGGTGTGTACATAACTCTATCTGCTTTGCCAGGAGGATGCAATGAGCTGAAACGAGTTCGTTTCAGTCGAAGACATTTCACAGAAGCACAAGCAGAGAAATGGTGGGCGGAATTCGGAGCGAAGGTTTGTGAGCGGCATAAA ATGGCTGAGAAAATGCCAGAGGGACACACTGCTATCCTCAACTCTGGCACTGTTTTTGGGCAAAATGGTAGTAATTTCAACCAGCTTTCCACTGAGAGCCTTTCAATGAGCATAAACTCTCGTTTGGAGTCTAATGGCATTTCAAAATGTCAAACCTTATCAACTGGAAGCAAAGTACAAAATGAGAAGGCAGAATGGGTTGTACAAGACGAACCAGGTGTGTACATAACTCTATCTGCTTTGCCAGGAGGATGCAATGAGCTGAAACGAGTTCGTTTCAGTCGAAGACATTTCACAGAAGCACAAGCAGAGAAATGGTGGGCGGAATTCGGAGCGAAGGTTTGTGAGCGGCATAAA MAEKMPEGHTAILNSGTVFGQNGSNFNQLSTESLSMSINSRLESNGISKCQTLSTGSKVQNEKAEWVVQDEPGVYITLSALPGGCNELKRVRFSRRHFTEAQAEKWWAEFGAKVCERHK
BLAST of Bhi06M000742 vs. Swiss-Prot
Match: sp|Q6YUB8|BRXL1_ORYSJ (Protein Brevis radix-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=BRXL1 PE=2 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 3.1e-14 Identity = 38/89 (42.70%), Postives = 55/89 (61.80%), Query Frame = 0
BLAST of Bhi06M000742 vs. Swiss-Prot
Match: sp|Q8GZ92|BRXL4_ARATH (Protein Brevis radix-like 4 OS=Arabidopsis thaliana OX=3702 GN=BRXL4 PE=2 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 7.7e-13 Identity = 43/98 (43.88%), Postives = 58/98 (59.18%), Query Frame = 0
BLAST of Bhi06M000742 vs. Swiss-Prot
Match: sp|Q947D2|PRAF1_ARATH (PH, RCC1 and FYVE domains-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRAF1 PE=1 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.3e-12 Identity = 37/65 (56.92%), Postives = 45/65 (69.23%), Query Frame = 0
BLAST of Bhi06M000742 vs. Swiss-Prot
Match: sp|Q5HZ09|BRXL3_ARATH (Protein Brevis radix-like 3 OS=Arabidopsis thaliana OX=3702 GN=BRXL3 PE=2 SV=2) HSP 1 Score: 73.6 bits (179), Expect = 1.7e-12 Identity = 35/88 (39.77%), Postives = 56/88 (63.64%), Query Frame = 0
BLAST of Bhi06M000742 vs. Swiss-Prot
Match: sp|Q8GYL9|BRXL2_ARATH (Protein Brevis radix-like 2 OS=Arabidopsis thaliana OX=3702 GN=BRXL2 PE=2 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 5.5e-11 Identity = 39/99 (39.39%), Postives = 56/99 (56.57%), Query Frame = 0
BLAST of Bhi06M000742 vs. TAIR10
Match: AT1G69710.1 (Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain) HSP 1 Score: 105.5 bits (262), Expect = 2.3e-23 Identity = 56/92 (60.87%), Postives = 68/92 (73.91%), Query Frame = 0
BLAST of Bhi06M000742 vs. TAIR10
Match: AT5G19420.2 (Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain) HSP 1 Score: 85.9 bits (211), Expect = 1.8e-17 Identity = 47/97 (48.45%), Postives = 63/97 (64.95%), Query Frame = 0
BLAST of Bhi06M000742 vs. TAIR10
Match: AT5G12350.1 (Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain) HSP 1 Score: 85.1 bits (209), Expect = 3.2e-17 Identity = 52/130 (40.00%), Postives = 72/130 (55.38%), Query Frame = 0
BLAST of Bhi06M000742 vs. TAIR10
Match: AT5G20540.1 (BREVIS RADIX-like 4) HSP 1 Score: 74.7 bits (182), Expect = 4.3e-14 Identity = 43/98 (43.88%), Postives = 58/98 (59.18%), Query Frame = 0
BLAST of Bhi06M000742 vs. TAIR10
Match: AT5G42140.1 (Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain) HSP 1 Score: 74.3 bits (181), Expect = 5.6e-14 Identity = 34/56 (60.71%), Postives = 41/56 (73.21%), Query Frame = 0
BLAST of Bhi06M000742 vs. TrEMBL
Match: tr|A0A1S4DUS6|A0A1S4DUS6_CUCME (X-linked retinitis pigmentosa GTPase regulator-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC103485768 PE=4 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 7.4e-53 Identity = 108/119 (90.76%), Postives = 109/119 (91.60%), Query Frame = 0
BLAST of Bhi06M000742 vs. TrEMBL
Match: tr|A0A1S3B4R6|A0A1S3B4R6_CUCME (X-linked retinitis pigmentosa GTPase regulator-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485768 PE=4 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 7.4e-53 Identity = 108/119 (90.76%), Postives = 109/119 (91.60%), Query Frame = 0
BLAST of Bhi06M000742 vs. TrEMBL
Match: tr|A0A1S3B416|A0A1S3B416_CUCME (X-linked retinitis pigmentosa GTPase regulator-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103485768 PE=4 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 7.4e-53 Identity = 108/119 (90.76%), Postives = 109/119 (91.60%), Query Frame = 0
BLAST of Bhi06M000742 vs. TrEMBL
Match: tr|A0A0A0LN51|A0A0A0LN51_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G110220 PE=4 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 1.6e-52 Identity = 107/119 (89.92%), Postives = 109/119 (91.60%), Query Frame = 0
BLAST of Bhi06M000742 vs. TrEMBL
Match: tr|W9QMX2|W9QMX2_9ROSA (Putative E3 ubiquitin-protein ligase HERC1 OS=Morus notabilis OX=981085 GN=L484_006532 PE=4 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 1.5e-29 Identity = 72/120 (60.00%), Postives = 88/120 (73.33%), Query Frame = 0
BLAST of Bhi06M000742 vs. NCBI nr
Match: XP_008441692.1 (PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like isoform X1 [Cucumis melo]) HSP 1 Score: 215.3 bits (547), Expect = 1.1e-52 Identity = 108/119 (90.76%), Postives = 109/119 (91.60%), Query Frame = 0
BLAST of Bhi06M000742 vs. NCBI nr
Match: XP_008441694.1 (PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like isoform X3 [Cucumis melo]) HSP 1 Score: 215.3 bits (547), Expect = 1.1e-52 Identity = 108/119 (90.76%), Postives = 109/119 (91.60%), Query Frame = 0
BLAST of Bhi06M000742 vs. NCBI nr
Match: XP_016899470.1 (PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like isoform X4 [Cucumis melo]) HSP 1 Score: 215.3 bits (547), Expect = 1.1e-52 Identity = 108/119 (90.76%), Postives = 109/119 (91.60%), Query Frame = 0
BLAST of Bhi06M000742 vs. NCBI nr
Match: KGN61396.1 (hypothetical protein Csa_2G110220 [Cucumis sativus]) HSP 1 Score: 214.2 bits (544), Expect = 2.5e-52 Identity = 107/119 (89.92%), Postives = 109/119 (91.60%), Query Frame = 0
BLAST of Bhi06M000742 vs. NCBI nr
Match: XP_022156646.1 (E3 ubiquitin-protein ligase HERC2-like isoform X3 [Momordica charantia]) HSP 1 Score: 207.2 bits (526), Expect = 3.0e-50 Identity = 103/118 (87.29%), Postives = 109/118 (92.37%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
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