Bhi05M001732 (mRNA) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi05M001732
Type	mRNA
Organism	Benincasa hispida (Wax gourd)
Description	protein ULTRAPETALA 1-like
Location	chr5 : 61646292 .. 61646552 (-)
Sequence length	261

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGAGATCAGAAGAAAATAGTAGTAATTGGGGAATGTTTGAAGAAGAAGGAGTTCAGAAAATGGAAGGGTTCGTTAAAGGATCGGATTTCATAGAGGTTCATTGCGGCTGCACCAGCAAGAAATATGGCGATTCTTCTGGTAAACTTAGGATTTCTTCTTCTGGCCATTTCTTCATCTTCTGTTTCTGCTCCGATGCCTGTAATGCCGGTATCTCTCTCTCTTCTCTTTCTCCTTCTTATTCTAGTCTTAGAGATTAA

mRNA sequence

ATGATGAGATCAGAAGAAAATAGTAGTAATTGGGGAATGTTTGAAGAAGAAGGAGTTCAGAAAATGGAAGGGTTCGTTAAAGGATCGGATTTCATAGAGGTTCATTGCGGCTGCACCAGCAAGAAATATGGCGATTCTTCTGGTAAACTTAGGATTTCTTCTTCTGGCCATTTCTTCATCTTCTGTTTCTGCTCCGATGCCTGTAATGCCGGTATCTCTCTCTCTTCTCTTTCTCCTTCTTATTCTAGTCTTAGAGATTAA

Coding sequence (CDS)

ATGATGAGATCAGAAGAAAATAGTAGTAATTGGGGAATGTTTGAAGAAGAAGGAGTTCAGAAAATGGAAGGGTTCGTTAAAGGATCGGATTTCATAGAGGTTCATTGCGGCTGCACCAGCAAGAAATATGGCGATTCTTCTGGTAAACTTAGGATTTCTTCTTCTGGCCATTTCTTCATCTTCTGTTTCTGCTCCGATGCCTGTAATGCCGGTATCTCTCTCTCTTCTCTTTCTCCTTCTTATTCTAGTCTTAGAGATTAA

Protein sequence

MMRSEENSSNWGMFEEEGVQKMEGFVKGSDFIEVHCGCTSKKYGDSSGKLRISSSGHFFIFCFCSDACNAGISLSSLSPSYSSLRD

Homology

[Close]

BLAST of Bhi05M001732 vs. Swiss-Prot
Match: sp|Q8GZA8|ULT1_ARATH (Protein ULTRAPETALA 1 OS=Arabidopsis thaliana OX=3702 GN=ULT1 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 5.4e-08
Identity = 24/57 (42.11%), Postives = 38/57 (66.67%), Query Frame = 0


Query: 13 MFEEEGVQKMEGFVKGSDFIEVHCGCTSKKYGDSSGKLRISSSGHFFIFCFCSDACN 70
          +F++E +Q+M G   G D++EV CGCTS +YGD+  +LR+  +G   I C C+  C+
Sbjct: 14 LFKQEELQEMSGVNVGGDYVEVMCGCTSHRYGDAVARLRVFPTGDLEITCECTPGCD 70

[Close]

BLAST of Bhi05M001732 vs. Swiss-Prot
Match: sp|Q8S8I2|ULT2_ARATH (Protein ULTRAPETALA 2 OS=Arabidopsis thaliana OX=3702 GN=ULT2 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 5.4e-08
Identity = 25/56 (44.64%), Postives = 37/56 (66.07%), Query Frame = 0


Query: 13 MFEEEGVQKMEGFVKGSDFIEVHCGCTSKKYGDSSGKLRISSSGHFFIFCFCSDAC 69
          +F +E +Q++ G   G D++EV CGCTS +YGD+  +L+I S G   I C C+ AC
Sbjct: 10 LFSKEELQEISGVHVGDDYVEVMCGCTSHRYGDAVARLKIFSDGELQITCQCTPAC 65

[Close]

BLAST of Bhi05M001732 vs. TAIR10
Match: AT4G28190.2 (Developmental regulator, ULTRAPETALA)

HSP 1 Score: 65.9 bits (159), Expect = 1.4e-11
Identity = 30/74 (40.54%), Postives = 47/74 (63.51%), Query Frame = 0


Query: 13 MFEEEGVQKMEGFVKGSDFIEVHCGCTSKKYGDSSGKLRISSSGHFFIFCFCSDACNAGI 72
          +F++E +Q+M G   G D++EV CGCTS +YGD+  +LR+  +G   I C C+  C+ G+
Sbjct: 14 LFKQEELQEMSGVNVGGDYVEVMCGCTSHRYGDAVARLRVFPTGDLEITCECTPGCDEGL 73

Query: 73 SLSSLSPSYSSLRD 87
          S    + S+S L D
Sbjct: 74 SFFVSTVSFSCLSD 87

[Close]

BLAST of Bhi05M001732 vs. TAIR10
Match: AT2G20825.1 (Developmental regulator, ULTRAPETALA)

HSP 1 Score: 58.2 bits (139), Expect = 3.0e-09
Identity = 25/56 (44.64%), Postives = 37/56 (66.07%), Query Frame = 0


Query: 13 MFEEEGVQKMEGFVKGSDFIEVHCGCTSKKYGDSSGKLRISSSGHFFIFCFCSDAC 69
          +F +E +Q++ G   G D++EV CGCTS +YGD+  +L+I S G   I C C+ AC
Sbjct: 10 LFSKEELQEISGVHVGDDYVEVMCGCTSHRYGDAVARLKIFSDGELQITCQCTPAC 65

[Close]

BLAST of Bhi05M001732 vs. TrEMBL
Match: tr|A0A1S3C0C1|A0A1S3C0C1_CUCME (protein ULTRAPETALA 1-like OS=Cucumis melo OX=3656 GN=LOC103495003 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 5.4e-21
Identity = 49/59 (83.05%), Postives = 54/59 (91.53%), Query Frame = 0


Query: 13 MFEEEGVQKMEGFVKGSDFIEVHCGCTSKKYGDSSGKLRISSSGHFFIFCFCSDACNAG 72
          MFEEE V+KM GFVKGSD+IEV+CGCTSKKYGD  GKLR+SSSGHF IFCFCSD+CNAG
Sbjct: 1  MFEEEEVEKMGGFVKGSDYIEVNCGCTSKKYGDFCGKLRVSSSGHFLIFCFCSDSCNAG 59

[Close]

BLAST of Bhi05M001732 vs. TrEMBL
Match: tr|A0A0A0LGD6|A0A0A0LGD6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G851820 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.0e-19
Identity = 45/53 (84.91%), Postives = 49/53 (92.45%), Query Frame = 0


Query: 19 VQKMEGFVKGSDFIEVHCGCTSKKYGDSSGKLRISSSGHFFIFCFCSDACNAG 72
          V+KM GFVKGSD+IEVHCGCTSKKYGD  GKLR+SSSGHF IFCFCSD+CNAG
Sbjct: 26 VEKMGGFVKGSDYIEVHCGCTSKKYGDFCGKLRVSSSGHFLIFCFCSDSCNAG 78

[Close]

BLAST of Bhi05M001732 vs. TrEMBL
Match: tr|A0A1U8J8I5|A0A1U8J8I5_GOSHI (protein ULTRAPETALA 2-like isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC107902910 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.1e-10
Identity = 34/62 (54.84%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 7  NSSNWGMFEEEGVQKMEGFVKGSDFIEVHCGCTSKKYGDSSGKLRISSSGHFFIFCFCSD 66
          NS    MF EE ++ +EG  +GSDFIEV CGCTS+KYGD+ GKLR+ ++G F I C C+ 
Sbjct: 2  NSRLSNMFTEEELKDIEGLKRGSDFIEVKCGCTSRKYGDTIGKLRVFTNGQFLISCECTP 61

Query: 67 AC 69
          +C
Sbjct: 62 SC 63

[Close]

BLAST of Bhi05M001732 vs. TrEMBL
Match: tr|A0A0D2U109|A0A0D2U109_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G431300 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.1e-10
Identity = 34/62 (54.84%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 7  NSSNWGMFEEEGVQKMEGFVKGSDFIEVHCGCTSKKYGDSSGKLRISSSGHFFIFCFCSD 66
          NS    MF EE ++ +EG  +GSDFIEV CGCTS+KYGD+ GKLR+ ++G F I C C+ 
Sbjct: 2  NSRLSNMFTEEELKDIEGLKRGSDFIEVKCGCTSRKYGDTIGKLRVFTNGQFLISCECTP 61

Query: 67 AC 69
          +C
Sbjct: 62 SC 63

[Close]

BLAST of Bhi05M001732 vs. TrEMBL
Match: tr|A0A1U8NFY3|A0A1U8NFY3_GOSHI (uncharacterized protein LOC107947919 OS=Gossypium hirsutum OX=3635 GN=LOC107947919 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.1e-10
Identity = 33/59 (55.93%), Postives = 43/59 (72.88%), Query Frame = 0


Query: 13 MFEEEGVQKMEGFVKGSDFIEVHCGCTSKKYGDSSGKLRISSSGHFFIFCFCSDACNAG 72
          MF EE ++ +EG  +GSDFIEV CGCTS+KYGD+ GKLR+ ++G F I C C+  C  G
Sbjct: 1  MFTEEELKDIEGLKRGSDFIEVKCGCTSRKYGDTIGKLRVFTNGQFLISCECTPYCEEG 59

[Close]

BLAST of Bhi05M001732 vs. NCBI nr
Match: XP_022981597.1 (protein ULTRAPETALA 2-like [Cucurbita maxima])

HSP 1 Score: 113.6 bits (283), Expect = 3.3e-22
Identity = 50/61 (81.97%), Postives = 55/61 (90.16%), Query Frame = 0


Query: 11 WGMFEEEGVQKMEGFVKGSDFIEVHCGCTSKKYGDSSGKLRISSSGHFFIFCFCSDACNA 70
          WG+ EEE V+KM GFVKGSDFIEVHCGCTSKKYGDS GKLR+S++G F IFCFCSDACNA
Sbjct: 7  WGLLEEEEVKKMGGFVKGSDFIEVHCGCTSKKYGDSPGKLRVSAAGQFLIFCFCSDACNA 66

Query: 71 G 72
          G
Sbjct: 67 G 67

[Close]

BLAST of Bhi05M001732 vs. NCBI nr
Match: XP_023525873.1 (protein ULTRAPETALA 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 112.1 bits (279), Expect = 9.6e-22
Identity = 49/61 (80.33%), Postives = 55/61 (90.16%), Query Frame = 0


Query: 11 WGMFEEEGVQKMEGFVKGSDFIEVHCGCTSKKYGDSSGKLRISSSGHFFIFCFCSDACNA 70
          WG+ EEE V+KM GFV+GSDFIEVHCGCTSKKYGDS GKLR+S++G F IFCFCSDACNA
Sbjct: 7  WGLLEEEEVKKMGGFVEGSDFIEVHCGCTSKKYGDSPGKLRVSAAGQFLIFCFCSDACNA 66

Query: 71 G 72
          G
Sbjct: 67 G 67

[Close]

BLAST of Bhi05M001732 vs. NCBI nr
Match: XP_004150103.2 (PREDICTED: protein ULTRAPETALA 1-like [Cucumis sativus])

HSP 1 Score: 111.7 bits (278), Expect = 1.3e-21
Identity = 50/59 (84.75%), Postives = 54/59 (91.53%), Query Frame = 0


Query: 13 MFEEEGVQKMEGFVKGSDFIEVHCGCTSKKYGDSSGKLRISSSGHFFIFCFCSDACNAG 72
          MFEEE V+KM GFVKGSD+IEVHCGCTSKKYGD  GKLR+SSSGHF IFCFCSD+CNAG
Sbjct: 1  MFEEEEVEKMGGFVKGSDYIEVHCGCTSKKYGDFCGKLRVSSSGHFLIFCFCSDSCNAG 59

[Close]

BLAST of Bhi05M001732 vs. NCBI nr
Match: XP_008454648.1 (PREDICTED: protein ULTRAPETALA 1-like [Cucumis melo])

HSP 1 Score: 109.0 bits (271), Expect = 8.1e-21
Identity = 49/59 (83.05%), Postives = 54/59 (91.53%), Query Frame = 0


Query: 13 MFEEEGVQKMEGFVKGSDFIEVHCGCTSKKYGDSSGKLRISSSGHFFIFCFCSDACNAG 72
          MFEEE V+KM GFVKGSD+IEV+CGCTSKKYGD  GKLR+SSSGHF IFCFCSD+CNAG
Sbjct: 1  MFEEEEVEKMGGFVKGSDYIEVNCGCTSKKYGDFCGKLRVSSSGHFLIFCFCSDSCNAG 59

[Close]

BLAST of Bhi05M001732 vs. NCBI nr
Match: XP_022941273.1 (protein ULTRAPETALA 1-like [Cucurbita moschata])

HSP 1 Score: 107.5 bits (267), Expect = 2.4e-20
Identity = 48/61 (78.69%), Postives = 54/61 (88.52%), Query Frame = 0


Query: 11 WGMFEEEGVQKMEGFVKGSDFIEVHCGCTSKKYGDSSGKLRISSSGHFFIFCFCSDACNA 70
          WG+ EEE V+KM GFV+GSDFIEVHCGCTSKKYGDS GKLR+S++G F IF FCSDACNA
Sbjct: 7  WGLLEEEEVKKMGGFVQGSDFIEVHCGCTSKKYGDSPGKLRVSAAGQFLIFRFCSDACNA 66

Query: 71 G 72
          G
Sbjct: 67 G 67

The following BLAST results are available for this feature:

BLAST of Bhi05M001732 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8GZA8\|ULT1_ARATH	5.4e-08	42.11	Protein ULTRAPETALA 1 OS=Arabidopsis thaliana OX=3702 GN=ULT1 PE=1 SV=1	[more]
sp\|Q8S8I2\|ULT2_ARATH	5.4e-08	44.64	Protein ULTRAPETALA 2 OS=Arabidopsis thaliana OX=3702 GN=ULT2 PE=2 SV=1	[more]

BLAST of Bhi05M001732 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G28190.2	1.4e-11	40.54	Developmental regulator, ULTRAPETALA	[more]
AT2G20825.1	3.0e-09	44.64	Developmental regulator, ULTRAPETALA	[more]

BLAST of Bhi05M001732 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C0C1\|A0A1S3C0C1_CUCME	5.4e-21	83.05	protein ULTRAPETALA 1-like OS=Cucumis melo OX=3656 GN=LOC103495003 PE=4 SV=1	[more]
tr\|A0A0A0LGD6\|A0A0A0LGD6_CUCSA	3.0e-19	84.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G851820 PE=4 SV=1	[more]
tr\|A0A1U8J8I5\|A0A1U8J8I5_GOSHI	1.1e-10	54.84	protein ULTRAPETALA 2-like isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC107902...	[more]
tr\|A0A0D2U109\|A0A0D2U109_GOSRA	1.1e-10	54.84	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G431300 PE=4 ...	[more]
tr\|A0A1U8NFY3\|A0A1U8NFY3_GOSHI	1.1e-10	55.93	uncharacterized protein LOC107947919 OS=Gossypium hirsutum OX=3635 GN=LOC1079479...	[more]

BLAST of Bhi05M001732 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022981597.1	3.3e-22	81.97	protein ULTRAPETALA 2-like [Cucurbita maxima]	[more]
XP_023525873.1	9.6e-22	80.33	protein ULTRAPETALA 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_004150103.2	1.3e-21	84.75	PREDICTED: protein ULTRAPETALA 1-like [Cucumis sativus]	[more]
XP_008454648.1	8.1e-21	83.05	PREDICTED: protein ULTRAPETALA 1-like [Cucumis melo]	[more]
XP_022941273.1	2.4e-20	78.69	protein ULTRAPETALA 1-like [Cucurbita moschata]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR020533	Developmental_reg_ULTRAPETALA

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi05G001732	Bhi05G001732	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi05M001732	cds.Bhi05M001732	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi05M001732.exon1	Bhi05M001732.exon1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi05M001732	Bhi05M001732-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020533	Developmental regulator, ULTRAPETALA	PANTHER	PTHR34053	FAMILY NOT NAMED	coord: 4..70
IPR020533	Developmental regulator, ULTRAPETALA	PRODOM	PD317854		coord: 13..69 e-value: 4.0E-9 score: 140.0