Bhi05G001732 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi05G001732
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	protein ULTRAPETALA 1-like
Location	chr5 : 61646292 .. 61646552 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGAGATCAGAAGAAAATAGTAGTAATTGGGGAATGTTTGAAGAAGAAGGAGTTCAGAAAATGGAAGGGTTCGTTAAAGGATCGGATTTCATAGAGGTTCATTGCGGCTGCACCAGCAAGAAATATGGCGATTCTTCTGGTAAACTTAGGATTTCTTCTTCTGGCCATTTCTTCATCTTCTGTTTCTGCTCCGATGCCTGTAATGCCGGTATCTCTCTCTCTTCTCTTTCTCCTTCTTATTCTAGTCTTAGAGATTAA

mRNA sequence

ATGATGAGATCAGAAGAAAATAGTAGTAATTGGGGAATGTTTGAAGAAGAAGGAGTTCAGAAAATGGAAGGGTTCGTTAAAGGATCGGATTTCATAGAGGTTCATTGCGGCTGCACCAGCAAGAAATATGGCGATTCTTCTGGTAAACTTAGGATTTCTTCTTCTGGCCATTTCTTCATCTTCTGTTTCTGCTCCGATGCCTGTAATGCCGGTATCTCTCTCTCTTCTCTTTCTCCTTCTTATTCTAGTCTTAGAGATTAA

Coding sequence (CDS)

ATGATGAGATCAGAAGAAAATAGTAGTAATTGGGGAATGTTTGAAGAAGAAGGAGTTCAGAAAATGGAAGGGTTCGTTAAAGGATCGGATTTCATAGAGGTTCATTGCGGCTGCACCAGCAAGAAATATGGCGATTCTTCTGGTAAACTTAGGATTTCTTCTTCTGGCCATTTCTTCATCTTCTGTTTCTGCTCCGATGCCTGTAATGCCGGTATCTCTCTCTCTTCTCTTTCTCCTTCTTATTCTAGTCTTAGAGATTAA

Protein sequence

MMRSEENSSNWGMFEEEGVQKMEGFVKGSDFIEVHCGCTSKKYGDSSGKLRISSSGHFFIFCFCSDACNAGISLSSLSPSYSSLRD

Homology

[Close]

BLAST of Bhi05G001732 vs. Swiss-Prot
Match: sp|Q8GZA8|ULT1_ARATH (Protein ULTRAPETALA 1 OS=Arabidopsis thaliana OX=3702 GN=ULT1 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 5.4e-08
Identity = 24/57 (42.11%), Postives = 38/57 (66.67%), Query Frame = 0


Query: 13 MFEEEGVQKMEGFVKGSDFIEVHCGCTSKKYGDSSGKLRISSSGHFFIFCFCSDACN 70
          +F++E +Q+M G   G D++EV CGCTS +YGD+  +LR+  +G   I C C+  C+
Sbjct: 14 LFKQEELQEMSGVNVGGDYVEVMCGCTSHRYGDAVARLRVFPTGDLEITCECTPGCD 70

[Close]

BLAST of Bhi05G001732 vs. Swiss-Prot
Match: sp|Q8S8I2|ULT2_ARATH (Protein ULTRAPETALA 2 OS=Arabidopsis thaliana OX=3702 GN=ULT2 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 5.4e-08
Identity = 25/56 (44.64%), Postives = 37/56 (66.07%), Query Frame = 0


Query: 13 MFEEEGVQKMEGFVKGSDFIEVHCGCTSKKYGDSSGKLRISSSGHFFIFCFCSDAC 69
          +F +E +Q++ G   G D++EV CGCTS +YGD+  +L+I S G   I C C+ AC
Sbjct: 10 LFSKEELQEISGVHVGDDYVEVMCGCTSHRYGDAVARLKIFSDGELQITCQCTPAC 65

[Close]

BLAST of Bhi05G001732 vs. TAIR10
Match: AT4G28190.2 (Developmental regulator, ULTRAPETALA)

HSP 1 Score: 65.9 bits (159), Expect = 1.4e-11
Identity = 30/74 (40.54%), Postives = 47/74 (63.51%), Query Frame = 0


Query: 13 MFEEEGVQKMEGFVKGSDFIEVHCGCTSKKYGDSSGKLRISSSGHFFIFCFCSDACNAGI 72
          +F++E +Q+M G   G D++EV CGCTS +YGD+  +LR+  +G   I C C+  C+ G+
Sbjct: 14 LFKQEELQEMSGVNVGGDYVEVMCGCTSHRYGDAVARLRVFPTGDLEITCECTPGCDEGL 73

Query: 73 SLSSLSPSYSSLRD 87
          S    + S+S L D
Sbjct: 74 SFFVSTVSFSCLSD 87

[Close]

BLAST of Bhi05G001732 vs. TAIR10
Match: AT2G20825.1 (Developmental regulator, ULTRAPETALA)

HSP 1 Score: 58.2 bits (139), Expect = 3.0e-09
Identity = 25/56 (44.64%), Postives = 37/56 (66.07%), Query Frame = 0


Query: 13 MFEEEGVQKMEGFVKGSDFIEVHCGCTSKKYGDSSGKLRISSSGHFFIFCFCSDAC 69
          +F +E +Q++ G   G D++EV CGCTS +YGD+  +L+I S G   I C C+ AC
Sbjct: 10 LFSKEELQEISGVHVGDDYVEVMCGCTSHRYGDAVARLKIFSDGELQITCQCTPAC 65

[Close]

BLAST of Bhi05G001732 vs. TrEMBL
Match: tr|A0A1S3C0C1|A0A1S3C0C1_CUCME (protein ULTRAPETALA 1-like OS=Cucumis melo OX=3656 GN=LOC103495003 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 5.4e-21
Identity = 49/59 (83.05%), Postives = 54/59 (91.53%), Query Frame = 0


Query: 13 MFEEEGVQKMEGFVKGSDFIEVHCGCTSKKYGDSSGKLRISSSGHFFIFCFCSDACNAG 72
          MFEEE V+KM GFVKGSD+IEV+CGCTSKKYGD  GKLR+SSSGHF IFCFCSD+CNAG
Sbjct: 1  MFEEEEVEKMGGFVKGSDYIEVNCGCTSKKYGDFCGKLRVSSSGHFLIFCFCSDSCNAG 59

[Close]

BLAST of Bhi05G001732 vs. TrEMBL
Match: tr|A0A0A0LGD6|A0A0A0LGD6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G851820 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.0e-19
Identity = 45/53 (84.91%), Postives = 49/53 (92.45%), Query Frame = 0


Query: 19 VQKMEGFVKGSDFIEVHCGCTSKKYGDSSGKLRISSSGHFFIFCFCSDACNAG 72
          V+KM GFVKGSD+IEVHCGCTSKKYGD  GKLR+SSSGHF IFCFCSD+CNAG
Sbjct: 26 VEKMGGFVKGSDYIEVHCGCTSKKYGDFCGKLRVSSSGHFLIFCFCSDSCNAG 78

[Close]

BLAST of Bhi05G001732 vs. TrEMBL
Match: tr|A0A1U8J8I5|A0A1U8J8I5_GOSHI (protein ULTRAPETALA 2-like isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC107902910 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.1e-10
Identity = 34/62 (54.84%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 7  NSSNWGMFEEEGVQKMEGFVKGSDFIEVHCGCTSKKYGDSSGKLRISSSGHFFIFCFCSD 66
          NS    MF EE ++ +EG  +GSDFIEV CGCTS+KYGD+ GKLR+ ++G F I C C+ 
Sbjct: 2  NSRLSNMFTEEELKDIEGLKRGSDFIEVKCGCTSRKYGDTIGKLRVFTNGQFLISCECTP 61

Query: 67 AC 69
          +C
Sbjct: 62 SC 63

[Close]

BLAST of Bhi05G001732 vs. TrEMBL
Match: tr|A0A0D2U109|A0A0D2U109_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G431300 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.1e-10
Identity = 34/62 (54.84%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 7  NSSNWGMFEEEGVQKMEGFVKGSDFIEVHCGCTSKKYGDSSGKLRISSSGHFFIFCFCSD 66
          NS    MF EE ++ +EG  +GSDFIEV CGCTS+KYGD+ GKLR+ ++G F I C C+ 
Sbjct: 2  NSRLSNMFTEEELKDIEGLKRGSDFIEVKCGCTSRKYGDTIGKLRVFTNGQFLISCECTP 61

Query: 67 AC 69
          +C
Sbjct: 62 SC 63

[Close]

BLAST of Bhi05G001732 vs. TrEMBL
Match: tr|A0A1U8NFY3|A0A1U8NFY3_GOSHI (uncharacterized protein LOC107947919 OS=Gossypium hirsutum OX=3635 GN=LOC107947919 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.1e-10
Identity = 33/59 (55.93%), Postives = 43/59 (72.88%), Query Frame = 0


Query: 13 MFEEEGVQKMEGFVKGSDFIEVHCGCTSKKYGDSSGKLRISSSGHFFIFCFCSDACNAG 72
          MF EE ++ +EG  +GSDFIEV CGCTS+KYGD+ GKLR+ ++G F I C C+  C  G
Sbjct: 1  MFTEEELKDIEGLKRGSDFIEVKCGCTSRKYGDTIGKLRVFTNGQFLISCECTPYCEEG 59

[Close]

BLAST of Bhi05G001732 vs. NCBI nr
Match: XP_022981597.1 (protein ULTRAPETALA 2-like [Cucurbita maxima])

HSP 1 Score: 113.6 bits (283), Expect = 3.3e-22
Identity = 50/61 (81.97%), Postives = 55/61 (90.16%), Query Frame = 0


Query: 11 WGMFEEEGVQKMEGFVKGSDFIEVHCGCTSKKYGDSSGKLRISSSGHFFIFCFCSDACNA 70
          WG+ EEE V+KM GFVKGSDFIEVHCGCTSKKYGDS GKLR+S++G F IFCFCSDACNA
Sbjct: 7  WGLLEEEEVKKMGGFVKGSDFIEVHCGCTSKKYGDSPGKLRVSAAGQFLIFCFCSDACNA 66

Query: 71 G 72
          G
Sbjct: 67 G 67

[Close]

BLAST of Bhi05G001732 vs. NCBI nr
Match: XP_023525873.1 (protein ULTRAPETALA 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 112.1 bits (279), Expect = 9.6e-22
Identity = 49/61 (80.33%), Postives = 55/61 (90.16%), Query Frame = 0


Query: 11 WGMFEEEGVQKMEGFVKGSDFIEVHCGCTSKKYGDSSGKLRISSSGHFFIFCFCSDACNA 70
          WG+ EEE V+KM GFV+GSDFIEVHCGCTSKKYGDS GKLR+S++G F IFCFCSDACNA
Sbjct: 7  WGLLEEEEVKKMGGFVEGSDFIEVHCGCTSKKYGDSPGKLRVSAAGQFLIFCFCSDACNA 66

Query: 71 G 72
          G
Sbjct: 67 G 67

[Close]

BLAST of Bhi05G001732 vs. NCBI nr
Match: XP_004150103.2 (PREDICTED: protein ULTRAPETALA 1-like [Cucumis sativus])

HSP 1 Score: 111.7 bits (278), Expect = 1.3e-21
Identity = 50/59 (84.75%), Postives = 54/59 (91.53%), Query Frame = 0


Query: 13 MFEEEGVQKMEGFVKGSDFIEVHCGCTSKKYGDSSGKLRISSSGHFFIFCFCSDACNAG 72
          MFEEE V+KM GFVKGSD+IEVHCGCTSKKYGD  GKLR+SSSGHF IFCFCSD+CNAG
Sbjct: 1  MFEEEEVEKMGGFVKGSDYIEVHCGCTSKKYGDFCGKLRVSSSGHFLIFCFCSDSCNAG 59

[Close]

BLAST of Bhi05G001732 vs. NCBI nr
Match: XP_008454648.1 (PREDICTED: protein ULTRAPETALA 1-like [Cucumis melo])

HSP 1 Score: 109.0 bits (271), Expect = 8.1e-21
Identity = 49/59 (83.05%), Postives = 54/59 (91.53%), Query Frame = 0


Query: 13 MFEEEGVQKMEGFVKGSDFIEVHCGCTSKKYGDSSGKLRISSSGHFFIFCFCSDACNAG 72
          MFEEE V+KM GFVKGSD+IEV+CGCTSKKYGD  GKLR+SSSGHF IFCFCSD+CNAG
Sbjct: 1  MFEEEEVEKMGGFVKGSDYIEVNCGCTSKKYGDFCGKLRVSSSGHFLIFCFCSDSCNAG 59

[Close]

BLAST of Bhi05G001732 vs. NCBI nr
Match: XP_022941273.1 (protein ULTRAPETALA 1-like [Cucurbita moschata])

HSP 1 Score: 107.5 bits (267), Expect = 2.4e-20
Identity = 48/61 (78.69%), Postives = 54/61 (88.52%), Query Frame = 0


Query: 11 WGMFEEEGVQKMEGFVKGSDFIEVHCGCTSKKYGDSSGKLRISSSGHFFIFCFCSDACNA 70
          WG+ EEE V+KM GFV+GSDFIEVHCGCTSKKYGDS GKLR+S++G F IF FCSDACNA
Sbjct: 7  WGLLEEEEVKKMGGFVQGSDFIEVHCGCTSKKYGDSPGKLRVSAAGQFLIFRFCSDACNA 66

Query: 71 G 72
          G
Sbjct: 67 G 67

The following BLAST results are available for this feature:

BLAST of Bhi05G001732 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8GZA8\|ULT1_ARATH	5.4e-08	42.11	Protein ULTRAPETALA 1 OS=Arabidopsis thaliana OX=3702 GN=ULT1 PE=1 SV=1	[more]
sp\|Q8S8I2\|ULT2_ARATH	5.4e-08	44.64	Protein ULTRAPETALA 2 OS=Arabidopsis thaliana OX=3702 GN=ULT2 PE=2 SV=1	[more]

BLAST of Bhi05G001732 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G28190.2	1.4e-11	40.54	Developmental regulator, ULTRAPETALA	[more]
AT2G20825.1	3.0e-09	44.64	Developmental regulator, ULTRAPETALA	[more]

BLAST of Bhi05G001732 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C0C1\|A0A1S3C0C1_CUCME	5.4e-21	83.05	protein ULTRAPETALA 1-like OS=Cucumis melo OX=3656 GN=LOC103495003 PE=4 SV=1	[more]
tr\|A0A0A0LGD6\|A0A0A0LGD6_CUCSA	3.0e-19	84.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G851820 PE=4 SV=1	[more]
tr\|A0A1U8J8I5\|A0A1U8J8I5_GOSHI	1.1e-10	54.84	protein ULTRAPETALA 2-like isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC107902...	[more]
tr\|A0A0D2U109\|A0A0D2U109_GOSRA	1.1e-10	54.84	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G431300 PE=4 ...	[more]
tr\|A0A1U8NFY3\|A0A1U8NFY3_GOSHI	1.1e-10	55.93	uncharacterized protein LOC107947919 OS=Gossypium hirsutum OX=3635 GN=LOC1079479...	[more]

BLAST of Bhi05G001732 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022981597.1	3.3e-22	81.97	protein ULTRAPETALA 2-like [Cucurbita maxima]	[more]
XP_023525873.1	9.6e-22	80.33	protein ULTRAPETALA 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_004150103.2	1.3e-21	84.75	PREDICTED: protein ULTRAPETALA 1-like [Cucumis sativus]	[more]
XP_008454648.1	8.1e-21	83.05	PREDICTED: protein ULTRAPETALA 1-like [Cucumis melo]	[more]
XP_022941273.1	2.4e-20	78.69	protein ULTRAPETALA 1-like [Cucurbita moschata]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR020533	Developmental_reg_ULTRAPETALA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi05M001732	Bhi05M001732	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020533	Developmental regulator, ULTRAPETALA	PANTHER	PTHR34053	FAMILY NOT NAMED	coord: 4..70
IPR020533	Developmental regulator, ULTRAPETALA	PRODOM	PD317854		coord: 13..69 e-value: 4.0E-9 score: 140.0

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi05G001732	Wax gourd	wgowgoB069
Bhi05G001732	Cucumber (Gy14) v1	cgywgoB209
Bhi05G001732	Cucumber (Gy14) v1	cgywgoB478
Bhi05G001732	Cucumber (Gy14) v2	cgybwgoB537
Bhi05G001732	Cucumber (Gy14) v2	cgybwgoB642
Bhi05G001732	Cucurbita maxima (Rimu)	cmawgoB0121
Bhi05G001732	Cucurbita maxima (Rimu)	cmawgoB0654
Bhi05G001732	Cucurbita maxima (Rimu)	cmawgoB0680
Bhi05G001732	Cucurbita moschata (Rifu)	cmowgoB0117
Bhi05G001732	Cucurbita moschata (Rifu)	cmowgoB0655
Bhi05G001732	Cucurbita moschata (Rifu)	cmowgoB0676
Bhi05G001732	Cucurbita pepo (Zucchini)	cpewgoB0328
Bhi05G001732	Cucurbita pepo (Zucchini)	cpewgoB0347
Bhi05G001732	Cucurbita pepo (Zucchini)	cpewgoB0854
Bhi05G001732	Wild cucumber (PI 183967)	cpiwgoB567
Bhi05G001732	Wild cucumber (PI 183967)	cpiwgoB682
Bhi05G001732	Cucumber (Chinese Long) v3	cucwgoB580
Bhi05G001732	Cucumber (Chinese Long) v3	cucwgoB696
Bhi05G001732	Cucumber (Chinese Long) v2	cuwgoB562
Bhi05G001732	Cucumber (Chinese Long) v2	cuwgoB671
Bhi05G001732	Bottle gourd (USVL1VR-Ls)	lsiwgoB061
Bhi05G001732	Bottle gourd (USVL1VR-Ls)	lsiwgoB114
Bhi05G001732	Melon (DHL92) v3.6.1	medwgoB113
Bhi05G001732	Melon (DHL92) v3.6.1	medwgoB214
Bhi05G001732	Melon (DHL92) v3.5.1	mewgoB108
Bhi05G001732	Melon (DHL92) v3.5.1	mewgoB214
Bhi05G001732	Watermelon (Charleston Gray)	wcgwgoB042
Bhi05G001732	Watermelon (Charleston Gray)	wcgwgoB278
Bhi05G001732	Watermelon (97103) v2	wgowmbB252
Bhi05G001732	Watermelon (97103) v2	wgowmbB271
Bhi05G001732	Watermelon (97103) v1	wgowmB251
Bhi05G001732	Watermelon (97103) v1	wgowmB282
Bhi05G001732	Silver-seed gourd	carwgoB0417
Bhi05G001732	Silver-seed gourd	carwgoB0471
Bhi05G001732	Silver-seed gourd	carwgoB0641