Bhi05M001631 (mRNA) Wax gourd

NameBhi05M001631
TypemRNA
OrganismBenincasa hispida (Wax gourd)
DescriptionDDE_4 domain-containing protein
Locationchr5 : 59188932 .. 59189184 (-)
Sequence length154
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAACCAGAACCGATTACAAATACATGCACCGATGGAAGATGGAAGTGGTTTCAGGTACAAAAATTACTCAGTTTTTTATATGAATACGTCATAAATATGCATGCAACAATAGATTTTTTTTTTTAATTCATTCTGATCACTTGAGAGAAACAGAATTGTCTAGGTGCGCTAGACGGCACATACATTAAAGTGAATGTTAGTGTCGTCGATCAACCTCGATATAGGACGAGAAAGGGAGAGATTGCCACAAAC

mRNA sequence

AAAACCAGAACCGATTACAAATACATGCACCGATGGAAGATGGAAGTGGTTTCAGAATTGTCTAGGTGCGCTAGACGGCACATACATTAAAGTGAATGTTAGTGTCGTCGATCAACCTCGATATAGGACGAGAAAGGGAGAGATTGCCACAAAC

Coding sequence (CDS)

AAAACCAGAACCGATTACAAATACATGCACCGATGGAAGATGGAAGTGGTTTCAGAATTGTCTAGGTGCGCTAGACGGCACATACATTAAAGTGAATGTTAGTGTCGTCGATCAACCTCGATATAGGACGAGAAAGGGAGAGATTGCCACAAAC

Protein sequence

KPEPITNTCTDGRWKWFQNCLGALDGTYIKVNVSVVDQPRYRTRKGEIATN
BLAST of Bhi05M001631 vs. TAIR10
Match: AT5G28950.1 (unknown protein)

HSP 1 Score: 40.8 bits (94), Expect = 2.9e-04
Identity = 16/38 (42.11%), Postives = 26/38 (68.42%), Query Frame = 0

Query: 14 WKWFQNCLGALDGTYIKVNVSVVDQPRYRTRKGEIATN 52
          + +F++C+GA+D T+I   VS    P +R RKG+I+ N
Sbjct: 19 YPYFKDCVGAIDDTHIFAMVSQKKMPSFRNRKGDISQN 56

BLAST of Bhi05M001631 vs. TrEMBL
Match: tr|A0A1S3C1U8|A0A1S3C1U8_CUCME (putative nuclease HARBI1 OS=Cucumis melo OX=3656 GN=LOC103495887 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 3.5e-20
Identity = 42/51 (82.35%), Postives = 48/51 (94.12%), Query Frame = 0

Query: 1   KPEPITNTCTDGRWKWFQNCLGALDGTYIKVNVSVVDQPRYRTRKGEIATN 52
           KP+P+TN+CTD RWKWF+NCLGALDGTYIKVNVS  D+PRYRTRKGE+ATN
Sbjct: 79  KPQPVTNSCTDPRWKWFENCLGALDGTYIKVNVSATDRPRYRTRKGEVATN 129

BLAST of Bhi05M001631 vs. TrEMBL
Match: tr|A0A1S3C5E3|A0A1S3C5E3_CUCME (uncharacterized protein LOC103496660 OS=Cucumis melo OX=3656 GN=LOC103496660 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 4.3e-18
Identity = 39/51 (76.47%), Postives = 46/51 (90.20%), Query Frame = 0

Query: 1   KPEPITNTCTDGRWKWFQNCLGALDGTYIKVNVSVVDQPRYRTRKGEIATN 52
           K +P+TN+CTD RWKWF+NCLGALD TYIKVNVS  D+PRY+TRKGE+ATN
Sbjct: 79  KLQPVTNSCTDSRWKWFENCLGALDDTYIKVNVSATDRPRYKTRKGEVATN 129

BLAST of Bhi05M001631 vs. TrEMBL
Match: tr|A0A2H3X8X5|A0A2H3X8X5_PHODC (uncharacterized protein LOC103699964 OS=Phoenix dactylifera OX=42345 GN=LOC103699964 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.3e-17
Identity = 40/51 (78.43%), Postives = 44/51 (86.27%), Query Frame = 0

Query: 1   KPEPITNTCTDGRWKWFQNCLGALDGTYIKVNVSVVDQPRYRTRKGEIATN 52
           KPE +T  CTD RWKWF+NCLGALDGTYIKVNV   D+PRYR+RKGEIATN
Sbjct: 55  KPEAVTENCTDERWKWFKNCLGALDGTYIKVNVEEADKPRYRSRKGEIATN 105

BLAST of Bhi05M001631 vs. TrEMBL
Match: tr|A0A1S3C8Z4|A0A1S3C8Z4_CUCME (uncharacterized protein LOC103498331 OS=Cucumis melo OX=3656 GN=LOC103498331 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 3.6e-17
Identity = 38/51 (74.51%), Postives = 44/51 (86.27%), Query Frame = 0

Query: 1   KPEPITNTCTDGRWKWFQNCLGALDGTYIKVNVSVVDQPRYRTRKGEIATN 52
           KP+P+ N CTD RW+WF+NCLGALDGTYIKVNV   D+ RYRTRKGE+ATN
Sbjct: 246 KPQPVPNDCTDQRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATN 296

BLAST of Bhi05M001631 vs. TrEMBL
Match: tr|E5GCB5|E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 3.6e-17
Identity = 38/51 (74.51%), Postives = 44/51 (86.27%), Query Frame = 0

Query: 1   KPEPITNTCTDGRWKWFQNCLGALDGTYIKVNVSVVDQPRYRTRKGEIATN 52
           KP+P+ N CTD RW+WF+NCLGALDGTYIKVNV   D+ RYRTRKGE+ATN
Sbjct: 121 KPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATN 171

BLAST of Bhi05M001631 vs. NCBI nr
Match: XP_008455792.1 (PREDICTED: putative nuclease HARBI1 [Cucumis melo])

HSP 1 Score: 105.5 bits (262), Expect = 5.3e-20
Identity = 42/51 (82.35%), Postives = 48/51 (94.12%), Query Frame = 0

Query: 1   KPEPITNTCTDGRWKWFQNCLGALDGTYIKVNVSVVDQPRYRTRKGEIATN 52
           KP+P+TN+CTD RWKWF+NCLGALDGTYIKVNVS  D+PRYRTRKGE+ATN
Sbjct: 79  KPQPVTNSCTDPRWKWFENCLGALDGTYIKVNVSATDRPRYRTRKGEVATN 129

BLAST of Bhi05M001631 vs. NCBI nr
Match: XP_008456821.1 (PREDICTED: uncharacterized protein LOC103496660 [Cucumis melo])

HSP 1 Score: 98.6 bits (244), Expect = 6.5e-18
Identity = 39/51 (76.47%), Postives = 46/51 (90.20%), Query Frame = 0

Query: 1   KPEPITNTCTDGRWKWFQNCLGALDGTYIKVNVSVVDQPRYRTRKGEIATN 52
           K +P+TN+CTD RWKWF+NCLGALD TYIKVNVS  D+PRY+TRKGE+ATN
Sbjct: 79  KLQPVTNSCTDSRWKWFENCLGALDDTYIKVNVSATDRPRYKTRKGEVATN 129

BLAST of Bhi05M001631 vs. NCBI nr
Match: XP_008780171.1 (PREDICTED: uncharacterized protein LOC103699964, partial [Phoenix dactylifera])

HSP 1 Score: 97.1 bits (240), Expect = 1.9e-17
Identity = 40/51 (78.43%), Postives = 44/51 (86.27%), Query Frame = 0

Query: 1   KPEPITNTCTDGRWKWFQNCLGALDGTYIKVNVSVVDQPRYRTRKGEIATN 52
           KPE +T  CTD RWKWF+NCLGALDGTYIKVNV   D+PRYR+RKGEIATN
Sbjct: 55  KPEAVTENCTDERWKWFKNCLGALDGTYIKVNVEEADKPRYRSRKGEIATN 105

BLAST of Bhi05M001631 vs. NCBI nr
Match: XP_024045039.1 (protein ALP1-like [Citrus clementina])

HSP 1 Score: 95.9 bits (237), Expect = 4.2e-17
Identity = 41/51 (80.39%), Postives = 44/51 (86.27%), Query Frame = 0

Query: 1   KPEPITNTCTDGRWKWFQNCLGALDGTYIKVNVSVVDQPRYRTRKGEIATN 52
           KPEPITN  TD +WKWF NCLGALDGTYIKV+VS  D+PRYRTRK EIATN
Sbjct: 114 KPEPITNNSTDPKWKWFTNCLGALDGTYIKVHVSEADKPRYRTRKNEIATN 164

BLAST of Bhi05M001631 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 95.5 bits (236), Expect = 5.5e-17
Identity = 38/51 (74.51%), Postives = 44/51 (86.27%), Query Frame = 0

Query: 1   KPEPITNTCTDGRWKWFQNCLGALDGTYIKVNVSVVDQPRYRTRKGEIATN 52
           KP+P+ N CTD RW+WF+NCLGALDGTYIKVNV   D+ RYRTRKGE+ATN
Sbjct: 121 KPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATN 171

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
AT5G28950.12.9e-0442.11unknown protein[more]
Match NameE-valueIdentityDescription
tr|A0A1S3C1U8|A0A1S3C1U8_CUCME3.5e-2082.35putative nuclease HARBI1 OS=Cucumis melo OX=3656 GN=LOC103495887 PE=4 SV=1[more]
tr|A0A1S3C5E3|A0A1S3C5E3_CUCME4.3e-1876.47uncharacterized protein LOC103496660 OS=Cucumis melo OX=3656 GN=LOC103496660 PE=... [more]
tr|A0A2H3X8X5|A0A2H3X8X5_PHODC1.3e-1778.43uncharacterized protein LOC103699964 OS=Phoenix dactylifera OX=42345 GN=LOC10369... [more]
tr|A0A1S3C8Z4|A0A1S3C8Z4_CUCME3.6e-1774.51uncharacterized protein LOC103498331 OS=Cucumis melo OX=3656 GN=LOC103498331 PE=... [more]
tr|E5GCB5|E5GCB5_CUCME3.6e-1774.51Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_008455792.15.3e-2082.35PREDICTED: putative nuclease HARBI1 [Cucumis melo][more]
XP_008456821.16.5e-1876.47PREDICTED: uncharacterized protein LOC103496660 [Cucumis melo][more]
XP_008780171.11.9e-1778.43PREDICTED: uncharacterized protein LOC103699964, partial [Phoenix dactylifera][more]
XP_024045039.14.2e-1780.39protein ALP1-like [Citrus clementina][more]
ADN34114.15.5e-1774.51retrotransposon protein [Cucumis melo subsp. melo][more]
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Bhi05G001631Bhi05G001631gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi05M001631.exon2Bhi05M001631.exon2exon
Bhi05M001631.exon1Bhi05M001631.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Bhi05M001631cds.Bhi05M001631CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Bhi05M001631Bhi05M001631-proteinpolypeptide


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR22930:SF112SUBFAMILY NOT NAMEDcoord: 2..51
NoneNo IPR availablePANTHERPTHR22930UNCHARACTERIZEDcoord: 2..51