Bhi05M000938 (mRNA) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi05M000938
Type	mRNA
Organism	Benincasa hispida (Wax gourd)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr5 : 38864080 .. 38864418 (+)
Sequence length	339

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTATCTTCAAACCAAAGGCTTGGTTATCTGTTGCCACTGATCTAGACACGGCTAAACCTCGTTCTTATAAGGAAACTTTGTTGCATACTAAATGGCATCGTGTAATGCTTTATGAGTATGAGGCTTTTATTCGAAATCAAACATGGTCTTTAGTGCCCTTACCCTCCGATCGGAAAATCATTGGAAGCAAATGGGTCTTTCGACTTAAACACAAACAATCTAGTGAAGTTGATCAGTTTAAGGCCCGACTAGTTGCCCAAGGATTCAGCCAAGACTATGGTATTGATTATTTTGGCACCTTTAGTCCAGTTGTTAAACCTACTACAATCTGCATT

mRNA sequence

ATGGGTATCTTCAAACCAAAGGCTTGGTTATCTGTTGCCACTGATCTAGACACGGCTAAACCTCGTTCTTATAAGGAAACTTTGTTGCATACTAAATGGCATCGTGTAATGCTTTATGAGTATGAGGCTTTTATTCGAAATCAAACATGGTCTTTAGTGCCCTTACCCTCCGATCGGAAAATCATTGGAAGCAAATGGGTCTTTCGACTTAAACACAAACAATCTAGTGAAGTTGATCAGTTTAAGGCCCGACTAGTTGCCCAAGGATTCAGCCAAGACTATGGTATTGATTATTTTGGCACCTTTAGTCCAGTTGTTAAACCTACTACAATCTGCATT

Coding sequence (CDS)

ATGGGTATCTTCAAACCAAAGGCTTGGTTATCTGTTGCCACTGATCTAGACACGGCTAAACCTCGTTCTTATAAGGAAACTTTGTTGCATACTAAATGGCATCGTGTAATGCTTTATGAGTATGAGGCTTTTATTCGAAATCAAACATGGTCTTTAGTGCCCTTACCCTCCGATCGGAAAATCATTGGAAGCAAATGGGTCTTTCGACTTAAACACAAACAATCTAGTGAAGTTGATCAGTTTAAGGCCCGACTAGTTGCCCAAGGATTCAGCCAAGACTATGGTATTGATTATTTTGGCACCTTTAGTCCAGTTGTTAAACCTACTACAATCTGCATT

Protein sequence

MGIFKPKAWLSVATDLDTAKPRSYKETLLHTKWHRVMLYEYEAFIRNQTWSLVPLPSDRKIIGSKWVFRLKHKQSSEVDQFKARLVAQGFSQDYGIDYFGTFSPVVKPTTICI

Homology

[Close]

BLAST of Bhi05M000938 vs. Swiss-Prot
Match: sp|Q94HW2|POLR1_ARATH (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.3e-17
Identity = 48/114 (42.11%), Postives = 68/114 (59.65%), Query Frame = 0


Query: 2    GIFKPKAWLSVATDLDT-AKPRSYKETLLHTKWHRVMLYEYEAFIRNQTWSLV-PLPSDR 61
            GI KP    S+A  L   ++PR+  + L   +W   M  E  A I N TW LV P PS  
Sbjct: 936  GIIKPNPKYSLAVSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHV 995

Query: 62   KIIGSKWVFRLKHKQSSEVDQFKARLVAQGFSQDYGIDYFGTFSPVVKPTTICI 114
             I+G +W+F  K+     ++++KARLVA+G++Q  G+DY  TFSPV+K T+I I
Sbjct: 996  TIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRI 1049

[Close]

BLAST of Bhi05M000938 vs. Swiss-Prot
Match: sp|Q9ZT94|POLR2_ARATH (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 8.3e-17
Identity = 47/114 (41.23%), Postives = 67/114 (58.77%), Query Frame = 0


Query: 2    GIFKPKAWLSVATDL-DTAKPRSYKETLLHTKWHRVMLYEYEAFIRNQTWSLVPLPSDR- 61
            GI KP    S AT L   ++PR+  + +   +W + M  E  A I N TW LVP P    
Sbjct: 919  GIRKPNQKYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSV 978

Query: 62   KIIGSKWVFRLKHKQSSEVDQFKARLVAQGFSQDYGIDYFGTFSPVVKPTTICI 114
             I+G +W+F  K      ++++KARLVA+G++Q  G+DY  TFSPV+K T+I I
Sbjct: 979  TIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRI 1032

[Close]

BLAST of Bhi05M000938 vs. Swiss-Prot
Match: sp|P92520|M820_ARATH (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.4e-16
Identity = 45/106 (42.45%), Postives = 64/106 (60.38%), Query Frame = 0


Query: 6   PKAWLSVATDLDTAKPRSYKETLLHTKWHRVMLYEYEAFIRNQTWSLVPLPSDRKIIGSK 65
           PK  L++ T +   +P+S    L    W + M  E +A  RN+TW LVP P ++ I+G K
Sbjct: 14  PKYSLTITTTI-KKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCK 73

Query: 66  WVFRLKHKQSSEVDQFKARLVAQGFSQDYGIDYFGTFSPVVKPTTI 112
           WVF+ K      +D+ KARLVA+GF Q+ GI +  T+SPVV+  TI
Sbjct: 74  WVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATI 118

[Close]

BLAST of Bhi05M000938 vs. Swiss-Prot
Match: sp|P10978|POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.5e-13
Identity = 41/98 (41.84%), Postives = 59/98 (60.20%), Query Frame = 0


Query: 17  DTAKPRSYKETLLHTKWH---RVMLYEYEAFIRNQTWSLVPLPSDRKIIGSKWVFRLKHK 76
           D  +P S KE L H + +   + M  E E+  +N T+ LV LP  ++ +  KWVF+LK  
Sbjct: 807 DDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKD 866

Query: 77  QSSEVDQFKARLVAQGFSQDYGIDYFGTFSPVVKPTTI 112
              ++ ++KARLV +GF Q  GID+   FSPVVK T+I
Sbjct: 867 GDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSI 904

[Close]

BLAST of Bhi05M000938 vs. Swiss-Prot
Match: sp|P04146|COPIA_DROME (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 69.7 bits (169), Expect = 2.3e-11
Identity = 30/77 (38.96%), Postives = 47/77 (61.04%), Query Frame = 0


Query: 31  TKWHRVMLYEYEAFIRNQTWSLVPLPSDRKIIGSKWVFRLKHKQSSEVDQFKARLVAQGF 90
           + W   +  E  A   N TW++   P ++ I+ S+WVF +K+ +     ++KARLVA+GF
Sbjct: 904 SSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGF 963

Query: 91  SQDYGIDYFGTFSPVVK 108
           +Q Y IDY  TF+PV +
Sbjct: 964 TQKYQIDYEETFAPVAR 980

[Close]

BLAST of Bhi05M000938 vs. TAIR10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase))

HSP 1 Score: 86.3 bits (212), Expect = 1.3e-17
Identity = 45/106 (42.45%), Postives = 64/106 (60.38%), Query Frame = 0


Query: 6   PKAWLSVATDLDTAKPRSYKETLLHTKWHRVMLYEYEAFIRNQTWSLVPLPSDRKIIGSK 65
           PK  L++ T +   +P+S    L    W + M  E +A  RN+TW LVP P ++ I+G K
Sbjct: 14  PKYSLTITTTI-KKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCK 73

Query: 66  WVFRLKHKQSSEVDQFKARLVAQGFSQDYGIDYFGTFSPVVKPTTI 112
           WVF+ K      +D+ KARLVA+GF Q+ GI +  T+SPVV+  TI
Sbjct: 74  WVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATI 118

[Close]

BLAST of Bhi05M000938 vs. TAIR10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8)

HSP 1 Score: 79.7 bits (195), Expect = 1.3e-15
Identity = 36/92 (39.13%), Postives = 55/92 (59.78%), Query Frame = 0


Query: 20  KPRSYKETLLHTKWHRVMLYEYEAFIRNQTWSLVPLPSDRKIIGSKWVFRLKHKQSSEVD 79
           +P +Y E      W   M  E  A     TW +  LP ++K IG KWV+++K+     ++
Sbjct: 85  EPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIE 144

Query: 80  QFKARLVAQGFSQDYGIDYFGTFSPVVKPTTI 112
           ++KARLVA+G++Q  GID+  TFSPV K T++
Sbjct: 145 RYKARLVAKGYTQQEGIDFIETFSPVCKLTSV 176

[Close]

BLAST of Bhi05M000938 vs. TrEMBL
Match: tr|A5AXM3|A5AXM3_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_012673 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.3e-27
Identity = 61/112 (54.46%), Postives = 75/112 (66.96%), Query Frame = 0


Query: 2   GIFKPKAWLSVATDLDTAKPRSYKETLLHTKWHRVMLYEYEAFIRNQTWSLVPLPSDRKI 61
           GIFKPK   S+       +P S+KE +LH  W   M  EY  F+ N TW LVP P +++I
Sbjct: 572 GIFKPKKIFSLVVQTIVVEPSSFKEAMLHXDWQAAMKIEYVVFLTNSTWKLVPKPVNKRI 631

Query: 62  IGSKWVFRLKHKQSSEVDQFKARLVAQGFSQDYGIDYFGTFSPVVKPTTICI 114
           IG KW+++LK K    VD+FKARLVA+GF+Q YGIDYF TF  VVKPTTI I
Sbjct: 632 IGCKWIYKLKLKADGLVDRFKARLVAKGFNQTYGIDYFETFCLVVKPTTIRI 683

[Close]

BLAST of Bhi05M000938 vs. TrEMBL
Match: tr|A5AQ04|A5AQ04_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_034738 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.0e-27
Identity = 65/110 (59.09%), Postives = 79/110 (71.82%), Query Frame = 0


Query: 2   GIFKPKAWLSVATDLDTAKPRSYKETLLHTKWHRVMLYEYEAFIRNQTWSLVPLPSDRKI 61
           GI K K +L   T L T +PR+ K+ L    W   M  EY+A ++NQTWSLVP PS+ KI
Sbjct: 784 GICKKKTYL---TSL-TIEPRTVKQALQDPNWKVAMEQEYQALLKNQTWSLVPPPSNAKI 843

Query: 62  IGSKWVFRLKHKQSSEVDQFKARLVAQGFSQDYGIDYFGTFSPVVKPTTI 112
           IG KWVF+LKHK +  +D++KARLVAQGF Q YGID+F TFSPVVKP TI
Sbjct: 844 IGCKWVFKLKHKPNGSIDRYKARLVAQGFHQTYGIDFFETFSPVVKPCTI 889

[Close]

BLAST of Bhi05M000938 vs. TrEMBL
Match: tr|A5CAE5|A5CAE5_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_020209 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 5.1e-27
Identity = 65/110 (59.09%), Postives = 79/110 (71.82%), Query Frame = 0


Query: 2   GIFKPKAWLSVATDLDTAKPRSYKETLLHTKWHRVMLYEYEAFIRNQTWSLVPLPSDRKI 61
           GI K K +L   T L T +PR+ K+TL    W   M  EY+A ++NQTWSLVP PS+ KI
Sbjct: 530 GICKKKTYL---TSL-TIEPRTVKQTLQDPNWKLAMEQEYQALLKNQTWSLVPPPSNAKI 589

Query: 62  IGSKWVFRLKHKQSSEVDQFKARLVAQGFSQDYGIDYFGTFSPVVKPTTI 112
           I  KWVF+LKHK +  +D++KARLVAQGF Q YGID+F TFSPVVKP TI
Sbjct: 590 IRCKWVFKLKHKPNGSIDRYKARLVAQGFHQTYGIDFFETFSPVVKPCTI 635

[Close]

BLAST of Bhi05M000938 vs. TrEMBL
Match: tr|A5ATX2|A5ATX2_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_036649 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.1e-25
Identity = 63/110 (57.27%), Postives = 76/110 (69.09%), Query Frame = 0


Query: 2   GIFKPKAWLSVATDLDTAKPRSYKETLLHTKWHRVMLYEYEAFIRNQTWSLVPLPSDRKI 61
           GI K K +L   T L  A+P + K+ L    W   M  EY+A ++NQTWSLVP PS+ KI
Sbjct: 399 GICKKKTYL---TSL-IAEPHTVKQALQDPNWKLAMEXEYQALLKNQTWSLVPPPSNVKI 458

Query: 62  IGSKWVFRLKHKQSSEVDQFKARLVAQGFSQDYGIDYFGTFSPVVKPTTI 112
           IG KWVF+LKHK    +D++KARLVAQGF Q YGID+F TFS VVKP TI
Sbjct: 459 IGCKWVFKLKHKXDGNIDRYKARLVAQGFHQTYGIDFFETFSXVVKPCTI 504

[Close]

BLAST of Bhi05M000938 vs. TrEMBL
Match: tr|A0A2N9GHZ2|A0A2N9GHZ2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29989 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.1e-24
Identity = 52/110 (47.27%), Postives = 72/110 (65.45%), Query Frame = 0


Query: 2   GIFKPKAWLSVATDLDTAKPRSYKETLLHTKWHRVMLYEYEAFIRNQTWSLVPLPSDRKI 61
           GIFKPK   +   D  T +P SY     HT W   M  E++A  +  TWSLVP+P+++ +
Sbjct: 865 GIFKPKVTYAAQVDYTTTEPASYTPASKHTHWCTAMDEEFQALQKQGTWSLVPMPANKNV 924

Query: 62  IGSKWVFRLKHKQSSEVDQFKARLVAQGFSQDYGIDYFGTFSPVVKPTTI 112
           +G KWV++LKH     + ++KARLVA+GF Q YGID+  TFSPV+KP T+
Sbjct: 925 VGCKWVYKLKHNSDGTIARYKARLVAKGFHQQYGIDFAETFSPVIKPPTV 974

[Close]

BLAST of Bhi05M000938 vs. NCBI nr
Match: CAN76151.1 (hypothetical protein VITISV_012673 [Vitis vinifera])

HSP 1 Score: 130.6 bits (327), Expect = 3.4e-27
Identity = 61/112 (54.46%), Postives = 75/112 (66.96%), Query Frame = 0


Query: 2   GIFKPKAWLSVATDLDTAKPRSYKETLLHTKWHRVMLYEYEAFIRNQTWSLVPLPSDRKI 61
           GIFKPK   S+       +P S+KE +LH  W   M  EY  F+ N TW LVP P +++I
Sbjct: 572 GIFKPKKIFSLVVQTIVVEPSSFKEAMLHXDWQAAMKIEYVVFLTNSTWKLVPKPVNKRI 631

Query: 62  IGSKWVFRLKHKQSSEVDQFKARLVAQGFSQDYGIDYFGTFSPVVKPTTICI 114
           IG KW+++LK K    VD+FKARLVA+GF+Q YGIDYF TF  VVKPTTI I
Sbjct: 632 IGCKWIYKLKLKADGLVDRFKARLVAKGFNQTYGIDYFETFCLVVKPTTIRI 683

[Close]

BLAST of Bhi05M000938 vs. NCBI nr
Match: CAN71553.1 (hypothetical protein VITISV_034738 [Vitis vinifera])

HSP 1 Score: 130.2 bits (326), Expect = 4.5e-27
Identity = 65/110 (59.09%), Postives = 79/110 (71.82%), Query Frame = 0


Query: 2   GIFKPKAWLSVATDLDTAKPRSYKETLLHTKWHRVMLYEYEAFIRNQTWSLVPLPSDRKI 61
           GI K K +L   T L T +PR+ K+ L    W   M  EY+A ++NQTWSLVP PS+ KI
Sbjct: 784 GICKKKTYL---TSL-TIEPRTVKQALQDPNWKVAMEQEYQALLKNQTWSLVPPPSNAKI 843

Query: 62  IGSKWVFRLKHKQSSEVDQFKARLVAQGFSQDYGIDYFGTFSPVVKPTTI 112
           IG KWVF+LKHK +  +D++KARLVAQGF Q YGID+F TFSPVVKP TI
Sbjct: 844 IGCKWVFKLKHKPNGSIDRYKARLVAQGFHQTYGIDFFETFSPVVKPCTI 889

[Close]

BLAST of Bhi05M000938 vs. NCBI nr
Match: CAN75478.1 (hypothetical protein VITISV_020209 [Vitis vinifera])

HSP 1 Score: 129.4 bits (324), Expect = 7.6e-27
Identity = 65/110 (59.09%), Postives = 79/110 (71.82%), Query Frame = 0


Query: 2   GIFKPKAWLSVATDLDTAKPRSYKETLLHTKWHRVMLYEYEAFIRNQTWSLVPLPSDRKI 61
           GI K K +L   T L T +PR+ K+TL    W   M  EY+A ++NQTWSLVP PS+ KI
Sbjct: 530 GICKKKTYL---TSL-TIEPRTVKQTLQDPNWKLAMEQEYQALLKNQTWSLVPPPSNAKI 589

Query: 62  IGSKWVFRLKHKQSSEVDQFKARLVAQGFSQDYGIDYFGTFSPVVKPTTI 112
           I  KWVF+LKHK +  +D++KARLVAQGF Q YGID+F TFSPVVKP TI
Sbjct: 590 IRCKWVFKLKHKPNGSIDRYKARLVAQGFHQTYGIDFFETFSPVVKPCTI 635

[Close]

BLAST of Bhi05M000938 vs. NCBI nr
Match: CAN73795.1 (hypothetical protein VITISV_036649 [Vitis vinifera])

HSP 1 Score: 124.0 bits (310), Expect = 3.2e-25
Identity = 63/110 (57.27%), Postives = 76/110 (69.09%), Query Frame = 0


Query: 2   GIFKPKAWLSVATDLDTAKPRSYKETLLHTKWHRVMLYEYEAFIRNQTWSLVPLPSDRKI 61
           GI K K +L   T L  A+P + K+ L    W   M  EY+A ++NQTWSLVP PS+ KI
Sbjct: 399 GICKKKTYL---TSL-IAEPHTVKQALQDPNWKLAMEXEYQALLKNQTWSLVPPPSNVKI 458

Query: 62  IGSKWVFRLKHKQSSEVDQFKARLVAQGFSQDYGIDYFGTFSPVVKPTTI 112
           IG KWVF+LKHK    +D++KARLVAQGF Q YGID+F TFS VVKP TI
Sbjct: 459 IGCKWVFKLKHKXDGNIDRYKARLVAQGFHQTYGIDFFETFSXVVKPCTI 504

[Close]

BLAST of Bhi05M000938 vs. NCBI nr
Match: XP_020978287.1 (uncharacterized protein LOC110271621 [Arachis ipaensis])

HSP 1 Score: 120.9 bits (302), Expect = 2.7e-24
Identity = 60/110 (54.55%), Postives = 72/110 (65.45%), Query Frame = 0


Query: 2   GIFKPKAWLSVATDLDTAKPRSYKETLLHTKWHRVMLYEYEAFIRNQTWSLVPLPSDRKI 61
           GIFKPKA  +      T +PRS KE L H +W R +  EYE  +RN TW LVPLP   + 
Sbjct: 8   GIFKPKALQA------TVEPRSVKEALSHPEWKRAIDNEYEELMRNSTWKLVPLPQGGEA 67

Query: 62  IGSKWVFRLKHKQSSEVDQFKARLVAQGFSQDYGIDYFGTFSPVVKPTTI 112
           IGSKW+FR K+     + + KARLVAQGFSQ  G D+  TFSPVVKPT+I
Sbjct: 68  IGSKWIFRAKYNADGSLQKHKARLVAQGFSQKPGFDFIETFSPVVKPTSI 111

The following BLAST results are available for this feature:

BLAST of Bhi05M000938 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q94HW2\|POLR1_ARATH	1.3e-17	42.11	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
sp\|Q9ZT94\|POLR2_ARATH	8.3e-17	41.23	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
sp\|P92520\|M820_ARATH	2.4e-16	42.45	Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|P10978\|POLX_TOBAC	2.5e-13	41.84	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
sp\|P04146\|COPIA_DROME	2.3e-11	38.96	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]

BLAST of Bhi05M000938 vs. TAIR10


Match Name	E-value	Identity	Description
ATMG00820.1	1.3e-17	42.45	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
AT4G23160.1	1.3e-15	39.13	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]

BLAST of Bhi05M000938 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A5AXM3\|A5AXM3_VITVI	2.3e-27	54.46	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_012673 PE=4 SV=1	[more]
tr\|A5AQ04\|A5AQ04_VITVI	3.0e-27	59.09	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_034738 PE=4 SV=1	[more]
tr\|A5CAE5\|A5CAE5_VITVI	5.1e-27	59.09	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_020209 PE=4 SV=1	[more]
tr\|A5ATX2\|A5ATX2_VITVI	2.1e-25	57.27	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_036649 PE=4 SV=1	[more]
tr\|A0A2N9GHZ2\|A0A2N9GHZ2_FAGSY	1.1e-24	47.27	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29989 PE=4 SV=1	[more]

BLAST of Bhi05M000938 vs. NCBI nr


Match Name	E-value	Identity	Description
CAN76151.1	3.4e-27	54.46	hypothetical protein VITISV_012673 [Vitis vinifera]	[more]
CAN71553.1	4.5e-27	59.09	hypothetical protein VITISV_034738 [Vitis vinifera]	[more]
CAN75478.1	7.6e-27	59.09	hypothetical protein VITISV_020209 [Vitis vinifera]	[more]
CAN73795.1	3.2e-25	57.27	hypothetical protein VITISV_036649 [Vitis vinifera]	[more]
XP_020978287.1	2.7e-24	54.55	uncharacterized protein LOC110271621 [Arachis ipaensis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR013103	RVT_2

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi05G000938	Bhi05G000938	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi05M000938.exon1	Bhi05M000938.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi05M000938	cds.Bhi05M000938	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi05M000938	Bhi05M000938-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 47..111 e-value: 1.4E-17 score: 64.1
None	No IPR available	PANTHER	PTHR11439:SF204	SUBFAMILY NOT NAMED	coord: 18..112
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 18..112