Bhi05G000938 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi05G000938
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr5 : 38864080 .. 38864418 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTATCTTCAAACCAAAGGCTTGGTTATCTGTTGCCACTGATCTAGACACGGCTAAACCTCGTTCTTATAAGGAAACTTTGTTGCATACTAAATGGCATCGTGTAATGCTTTATGAGTATGAGGCTTTTATTCGAAATCAAACATGGTCTTTAGTGCCCTTACCCTCCGATCGGAAAATCATTGGAAGCAAATGGGTCTTTCGACTTAAACACAAACAATCTAGTGAAGTTGATCAGTTTAAGGCCCGACTAGTTGCCCAAGGATTCAGCCAAGACTATGGTATTGATTATTTTGGCACCTTTAGTCCAGTTGTTAAACCTACTACAATCTGCATT

mRNA sequence

ATGGGTATCTTCAAACCAAAGGCTTGGTTATCTGTTGCCACTGATCTAGACACGGCTAAACCTCGTTCTTATAAGGAAACTTTGTTGCATACTAAATGGCATCGTGTAATGCTTTATGAGTATGAGGCTTTTATTCGAAATCAAACATGGTCTTTAGTGCCCTTACCCTCCGATCGGAAAATCATTGGAAGCAAATGGGTCTTTCGACTTAAACACAAACAATCTAGTGAAGTTGATCAGTTTAAGGCCCGACTAGTTGCCCAAGGATTCAGCCAAGACTATGGTATTGATTATTTTGGCACCTTTAGTCCAGTTGTTAAACCTACTACAATCTGCATT

Coding sequence (CDS)

ATGGGTATCTTCAAACCAAAGGCTTGGTTATCTGTTGCCACTGATCTAGACACGGCTAAACCTCGTTCTTATAAGGAAACTTTGTTGCATACTAAATGGCATCGTGTAATGCTTTATGAGTATGAGGCTTTTATTCGAAATCAAACATGGTCTTTAGTGCCCTTACCCTCCGATCGGAAAATCATTGGAAGCAAATGGGTCTTTCGACTTAAACACAAACAATCTAGTGAAGTTGATCAGTTTAAGGCCCGACTAGTTGCCCAAGGATTCAGCCAAGACTATGGTATTGATTATTTTGGCACCTTTAGTCCAGTTGTTAAACCTACTACAATCTGCATT

Protein sequence

MGIFKPKAWLSVATDLDTAKPRSYKETLLHTKWHRVMLYEYEAFIRNQTWSLVPLPSDRKIIGSKWVFRLKHKQSSEVDQFKARLVAQGFSQDYGIDYFGTFSPVVKPTTICI

Homology

[Close]

BLAST of Bhi05G000938 vs. Swiss-Prot
Match: sp|Q94HW2|POLR1_ARATH (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.3e-17
Identity = 48/114 (42.11%), Postives = 68/114 (59.65%), Query Frame = 0


Query: 2    GIFKPKAWLSVATDLDT-AKPRSYKETLLHTKWHRVMLYEYEAFIRNQTWSLV-PLPSDR 61
            GI KP    S+A  L   ++PR+  + L   +W   M  E  A I N TW LV P PS  
Sbjct: 936  GIIKPNPKYSLAVSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHV 995

Query: 62   KIIGSKWVFRLKHKQSSEVDQFKARLVAQGFSQDYGIDYFGTFSPVVKPTTICI 114
             I+G +W+F  K+     ++++KARLVA+G++Q  G+DY  TFSPV+K T+I I
Sbjct: 996  TIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRI 1049

[Close]

BLAST of Bhi05G000938 vs. Swiss-Prot
Match: sp|Q9ZT94|POLR2_ARATH (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 8.3e-17
Identity = 47/114 (41.23%), Postives = 67/114 (58.77%), Query Frame = 0


Query: 2    GIFKPKAWLSVATDL-DTAKPRSYKETLLHTKWHRVMLYEYEAFIRNQTWSLVPLPSDR- 61
            GI KP    S AT L   ++PR+  + +   +W + M  E  A I N TW LVP P    
Sbjct: 919  GIRKPNQKYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSV 978

Query: 62   KIIGSKWVFRLKHKQSSEVDQFKARLVAQGFSQDYGIDYFGTFSPVVKPTTICI 114
             I+G +W+F  K      ++++KARLVA+G++Q  G+DY  TFSPV+K T+I I
Sbjct: 979  TIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRI 1032

[Close]

BLAST of Bhi05G000938 vs. Swiss-Prot
Match: sp|P92520|M820_ARATH (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.4e-16
Identity = 45/106 (42.45%), Postives = 64/106 (60.38%), Query Frame = 0


Query: 6   PKAWLSVATDLDTAKPRSYKETLLHTKWHRVMLYEYEAFIRNQTWSLVPLPSDRKIIGSK 65
           PK  L++ T +   +P+S    L    W + M  E +A  RN+TW LVP P ++ I+G K
Sbjct: 14  PKYSLTITTTI-KKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCK 73

Query: 66  WVFRLKHKQSSEVDQFKARLVAQGFSQDYGIDYFGTFSPVVKPTTI 112
           WVF+ K      +D+ KARLVA+GF Q+ GI +  T+SPVV+  TI
Sbjct: 74  WVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATI 118

[Close]

BLAST of Bhi05G000938 vs. Swiss-Prot
Match: sp|P10978|POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.5e-13
Identity = 41/98 (41.84%), Postives = 59/98 (60.20%), Query Frame = 0


Query: 17  DTAKPRSYKETLLHTKWH---RVMLYEYEAFIRNQTWSLVPLPSDRKIIGSKWVFRLKHK 76
           D  +P S KE L H + +   + M  E E+  +N T+ LV LP  ++ +  KWVF+LK  
Sbjct: 807 DDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKD 866

Query: 77  QSSEVDQFKARLVAQGFSQDYGIDYFGTFSPVVKPTTI 112
              ++ ++KARLV +GF Q  GID+   FSPVVK T+I
Sbjct: 867 GDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSI 904

[Close]

BLAST of Bhi05G000938 vs. Swiss-Prot
Match: sp|P04146|COPIA_DROME (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 69.7 bits (169), Expect = 2.3e-11
Identity = 30/77 (38.96%), Postives = 47/77 (61.04%), Query Frame = 0


Query: 31  TKWHRVMLYEYEAFIRNQTWSLVPLPSDRKIIGSKWVFRLKHKQSSEVDQFKARLVAQGF 90
           + W   +  E  A   N TW++   P ++ I+ S+WVF +K+ +     ++KARLVA+GF
Sbjct: 904 SSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGF 963

Query: 91  SQDYGIDYFGTFSPVVK 108
           +Q Y IDY  TF+PV +
Sbjct: 964 TQKYQIDYEETFAPVAR 980

[Close]

BLAST of Bhi05G000938 vs. TAIR10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase))

HSP 1 Score: 86.3 bits (212), Expect = 1.3e-17
Identity = 45/106 (42.45%), Postives = 64/106 (60.38%), Query Frame = 0


Query: 6   PKAWLSVATDLDTAKPRSYKETLLHTKWHRVMLYEYEAFIRNQTWSLVPLPSDRKIIGSK 65
           PK  L++ T +   +P+S    L    W + M  E +A  RN+TW LVP P ++ I+G K
Sbjct: 14  PKYSLTITTTI-KKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCK 73

Query: 66  WVFRLKHKQSSEVDQFKARLVAQGFSQDYGIDYFGTFSPVVKPTTI 112
           WVF+ K      +D+ KARLVA+GF Q+ GI +  T+SPVV+  TI
Sbjct: 74  WVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATI 118

[Close]

BLAST of Bhi05G000938 vs. TAIR10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8)

HSP 1 Score: 79.7 bits (195), Expect = 1.3e-15
Identity = 36/92 (39.13%), Postives = 55/92 (59.78%), Query Frame = 0


Query: 20  KPRSYKETLLHTKWHRVMLYEYEAFIRNQTWSLVPLPSDRKIIGSKWVFRLKHKQSSEVD 79
           +P +Y E      W   M  E  A     TW +  LP ++K IG KWV+++K+     ++
Sbjct: 85  EPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIE 144

Query: 80  QFKARLVAQGFSQDYGIDYFGTFSPVVKPTTI 112
           ++KARLVA+G++Q  GID+  TFSPV K T++
Sbjct: 145 RYKARLVAKGYTQQEGIDFIETFSPVCKLTSV 176

[Close]

BLAST of Bhi05G000938 vs. TrEMBL
Match: tr|A5AXM3|A5AXM3_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_012673 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.3e-27
Identity = 61/112 (54.46%), Postives = 75/112 (66.96%), Query Frame = 0


Query: 2   GIFKPKAWLSVATDLDTAKPRSYKETLLHTKWHRVMLYEYEAFIRNQTWSLVPLPSDRKI 61
           GIFKPK   S+       +P S+KE +LH  W   M  EY  F+ N TW LVP P +++I
Sbjct: 572 GIFKPKKIFSLVVQTIVVEPSSFKEAMLHXDWQAAMKIEYVVFLTNSTWKLVPKPVNKRI 631

Query: 62  IGSKWVFRLKHKQSSEVDQFKARLVAQGFSQDYGIDYFGTFSPVVKPTTICI 114
           IG KW+++LK K    VD+FKARLVA+GF+Q YGIDYF TF  VVKPTTI I
Sbjct: 632 IGCKWIYKLKLKADGLVDRFKARLVAKGFNQTYGIDYFETFCLVVKPTTIRI 683

[Close]

BLAST of Bhi05G000938 vs. TrEMBL
Match: tr|A5AQ04|A5AQ04_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_034738 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.0e-27
Identity = 65/110 (59.09%), Postives = 79/110 (71.82%), Query Frame = 0


Query: 2   GIFKPKAWLSVATDLDTAKPRSYKETLLHTKWHRVMLYEYEAFIRNQTWSLVPLPSDRKI 61
           GI K K +L   T L T +PR+ K+ L    W   M  EY+A ++NQTWSLVP PS+ KI
Sbjct: 784 GICKKKTYL---TSL-TIEPRTVKQALQDPNWKVAMEQEYQALLKNQTWSLVPPPSNAKI 843

Query: 62  IGSKWVFRLKHKQSSEVDQFKARLVAQGFSQDYGIDYFGTFSPVVKPTTI 112
           IG KWVF+LKHK +  +D++KARLVAQGF Q YGID+F TFSPVVKP TI
Sbjct: 844 IGCKWVFKLKHKPNGSIDRYKARLVAQGFHQTYGIDFFETFSPVVKPCTI 889

[Close]

BLAST of Bhi05G000938 vs. TrEMBL
Match: tr|A5CAE5|A5CAE5_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_020209 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 5.1e-27
Identity = 65/110 (59.09%), Postives = 79/110 (71.82%), Query Frame = 0


Query: 2   GIFKPKAWLSVATDLDTAKPRSYKETLLHTKWHRVMLYEYEAFIRNQTWSLVPLPSDRKI 61
           GI K K +L   T L T +PR+ K+TL    W   M  EY+A ++NQTWSLVP PS+ KI
Sbjct: 530 GICKKKTYL---TSL-TIEPRTVKQTLQDPNWKLAMEQEYQALLKNQTWSLVPPPSNAKI 589

Query: 62  IGSKWVFRLKHKQSSEVDQFKARLVAQGFSQDYGIDYFGTFSPVVKPTTI 112
           I  KWVF+LKHK +  +D++KARLVAQGF Q YGID+F TFSPVVKP TI
Sbjct: 590 IRCKWVFKLKHKPNGSIDRYKARLVAQGFHQTYGIDFFETFSPVVKPCTI 635

[Close]

BLAST of Bhi05G000938 vs. TrEMBL
Match: tr|A5ATX2|A5ATX2_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_036649 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.1e-25
Identity = 63/110 (57.27%), Postives = 76/110 (69.09%), Query Frame = 0


Query: 2   GIFKPKAWLSVATDLDTAKPRSYKETLLHTKWHRVMLYEYEAFIRNQTWSLVPLPSDRKI 61
           GI K K +L   T L  A+P + K+ L    W   M  EY+A ++NQTWSLVP PS+ KI
Sbjct: 399 GICKKKTYL---TSL-IAEPHTVKQALQDPNWKLAMEXEYQALLKNQTWSLVPPPSNVKI 458

Query: 62  IGSKWVFRLKHKQSSEVDQFKARLVAQGFSQDYGIDYFGTFSPVVKPTTI 112
           IG KWVF+LKHK    +D++KARLVAQGF Q YGID+F TFS VVKP TI
Sbjct: 459 IGCKWVFKLKHKXDGNIDRYKARLVAQGFHQTYGIDFFETFSXVVKPCTI 504

[Close]

BLAST of Bhi05G000938 vs. TrEMBL
Match: tr|A0A2N9GHZ2|A0A2N9GHZ2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29989 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.1e-24
Identity = 52/110 (47.27%), Postives = 72/110 (65.45%), Query Frame = 0


Query: 2   GIFKPKAWLSVATDLDTAKPRSYKETLLHTKWHRVMLYEYEAFIRNQTWSLVPLPSDRKI 61
           GIFKPK   +   D  T +P SY     HT W   M  E++A  +  TWSLVP+P+++ +
Sbjct: 865 GIFKPKVTYAAQVDYTTTEPASYTPASKHTHWCTAMDEEFQALQKQGTWSLVPMPANKNV 924

Query: 62  IGSKWVFRLKHKQSSEVDQFKARLVAQGFSQDYGIDYFGTFSPVVKPTTI 112
           +G KWV++LKH     + ++KARLVA+GF Q YGID+  TFSPV+KP T+
Sbjct: 925 VGCKWVYKLKHNSDGTIARYKARLVAKGFHQQYGIDFAETFSPVIKPPTV 974

[Close]

BLAST of Bhi05G000938 vs. NCBI nr
Match: CAN76151.1 (hypothetical protein VITISV_012673 [Vitis vinifera])

HSP 1 Score: 130.6 bits (327), Expect = 3.4e-27
Identity = 61/112 (54.46%), Postives = 75/112 (66.96%), Query Frame = 0


Query: 2   GIFKPKAWLSVATDLDTAKPRSYKETLLHTKWHRVMLYEYEAFIRNQTWSLVPLPSDRKI 61
           GIFKPK   S+       +P S+KE +LH  W   M  EY  F+ N TW LVP P +++I
Sbjct: 572 GIFKPKKIFSLVVQTIVVEPSSFKEAMLHXDWQAAMKIEYVVFLTNSTWKLVPKPVNKRI 631

Query: 62  IGSKWVFRLKHKQSSEVDQFKARLVAQGFSQDYGIDYFGTFSPVVKPTTICI 114
           IG KW+++LK K    VD+FKARLVA+GF+Q YGIDYF TF  VVKPTTI I
Sbjct: 632 IGCKWIYKLKLKADGLVDRFKARLVAKGFNQTYGIDYFETFCLVVKPTTIRI 683

[Close]

BLAST of Bhi05G000938 vs. NCBI nr
Match: CAN71553.1 (hypothetical protein VITISV_034738 [Vitis vinifera])

HSP 1 Score: 130.2 bits (326), Expect = 4.5e-27
Identity = 65/110 (59.09%), Postives = 79/110 (71.82%), Query Frame = 0


Query: 2   GIFKPKAWLSVATDLDTAKPRSYKETLLHTKWHRVMLYEYEAFIRNQTWSLVPLPSDRKI 61
           GI K K +L   T L T +PR+ K+ L    W   M  EY+A ++NQTWSLVP PS+ KI
Sbjct: 784 GICKKKTYL---TSL-TIEPRTVKQALQDPNWKVAMEQEYQALLKNQTWSLVPPPSNAKI 843

Query: 62  IGSKWVFRLKHKQSSEVDQFKARLVAQGFSQDYGIDYFGTFSPVVKPTTI 112
           IG KWVF+LKHK +  +D++KARLVAQGF Q YGID+F TFSPVVKP TI
Sbjct: 844 IGCKWVFKLKHKPNGSIDRYKARLVAQGFHQTYGIDFFETFSPVVKPCTI 889

[Close]

BLAST of Bhi05G000938 vs. NCBI nr
Match: CAN75478.1 (hypothetical protein VITISV_020209 [Vitis vinifera])

HSP 1 Score: 129.4 bits (324), Expect = 7.6e-27
Identity = 65/110 (59.09%), Postives = 79/110 (71.82%), Query Frame = 0


Query: 2   GIFKPKAWLSVATDLDTAKPRSYKETLLHTKWHRVMLYEYEAFIRNQTWSLVPLPSDRKI 61
           GI K K +L   T L T +PR+ K+TL    W   M  EY+A ++NQTWSLVP PS+ KI
Sbjct: 530 GICKKKTYL---TSL-TIEPRTVKQTLQDPNWKLAMEQEYQALLKNQTWSLVPPPSNAKI 589

Query: 62  IGSKWVFRLKHKQSSEVDQFKARLVAQGFSQDYGIDYFGTFSPVVKPTTI 112
           I  KWVF+LKHK +  +D++KARLVAQGF Q YGID+F TFSPVVKP TI
Sbjct: 590 IRCKWVFKLKHKPNGSIDRYKARLVAQGFHQTYGIDFFETFSPVVKPCTI 635

[Close]

BLAST of Bhi05G000938 vs. NCBI nr
Match: CAN73795.1 (hypothetical protein VITISV_036649 [Vitis vinifera])

HSP 1 Score: 124.0 bits (310), Expect = 3.2e-25
Identity = 63/110 (57.27%), Postives = 76/110 (69.09%), Query Frame = 0


Query: 2   GIFKPKAWLSVATDLDTAKPRSYKETLLHTKWHRVMLYEYEAFIRNQTWSLVPLPSDRKI 61
           GI K K +L   T L  A+P + K+ L    W   M  EY+A ++NQTWSLVP PS+ KI
Sbjct: 399 GICKKKTYL---TSL-IAEPHTVKQALQDPNWKLAMEXEYQALLKNQTWSLVPPPSNVKI 458

Query: 62  IGSKWVFRLKHKQSSEVDQFKARLVAQGFSQDYGIDYFGTFSPVVKPTTI 112
           IG KWVF+LKHK    +D++KARLVAQGF Q YGID+F TFS VVKP TI
Sbjct: 459 IGCKWVFKLKHKXDGNIDRYKARLVAQGFHQTYGIDFFETFSXVVKPCTI 504

[Close]

BLAST of Bhi05G000938 vs. NCBI nr
Match: XP_020978287.1 (uncharacterized protein LOC110271621 [Arachis ipaensis])

HSP 1 Score: 120.9 bits (302), Expect = 2.7e-24
Identity = 60/110 (54.55%), Postives = 72/110 (65.45%), Query Frame = 0


Query: 2   GIFKPKAWLSVATDLDTAKPRSYKETLLHTKWHRVMLYEYEAFIRNQTWSLVPLPSDRKI 61
           GIFKPKA  +      T +PRS KE L H +W R +  EYE  +RN TW LVPLP   + 
Sbjct: 8   GIFKPKALQA------TVEPRSVKEALSHPEWKRAIDNEYEELMRNSTWKLVPLPQGGEA 67

Query: 62  IGSKWVFRLKHKQSSEVDQFKARLVAQGFSQDYGIDYFGTFSPVVKPTTI 112
           IGSKW+FR K+     + + KARLVAQGFSQ  G D+  TFSPVVKPT+I
Sbjct: 68  IGSKWIFRAKYNADGSLQKHKARLVAQGFSQKPGFDFIETFSPVVKPTSI 111

The following BLAST results are available for this feature:

BLAST of Bhi05G000938 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q94HW2\|POLR1_ARATH	1.3e-17	42.11	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
sp\|Q9ZT94\|POLR2_ARATH	8.3e-17	41.23	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
sp\|P92520\|M820_ARATH	2.4e-16	42.45	Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|P10978\|POLX_TOBAC	2.5e-13	41.84	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
sp\|P04146\|COPIA_DROME	2.3e-11	38.96	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]

BLAST of Bhi05G000938 vs. TAIR10


Match Name	E-value	Identity	Description
ATMG00820.1	1.3e-17	42.45	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
AT4G23160.1	1.3e-15	39.13	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]

BLAST of Bhi05G000938 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A5AXM3\|A5AXM3_VITVI	2.3e-27	54.46	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_012673 PE=4 SV=1	[more]
tr\|A5AQ04\|A5AQ04_VITVI	3.0e-27	59.09	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_034738 PE=4 SV=1	[more]
tr\|A5CAE5\|A5CAE5_VITVI	5.1e-27	59.09	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_020209 PE=4 SV=1	[more]
tr\|A5ATX2\|A5ATX2_VITVI	2.1e-25	57.27	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_036649 PE=4 SV=1	[more]
tr\|A0A2N9GHZ2\|A0A2N9GHZ2_FAGSY	1.1e-24	47.27	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29989 PE=4 SV=1	[more]

BLAST of Bhi05G000938 vs. NCBI nr


Match Name	E-value	Identity	Description
CAN76151.1	3.4e-27	54.46	hypothetical protein VITISV_012673 [Vitis vinifera]	[more]
CAN71553.1	4.5e-27	59.09	hypothetical protein VITISV_034738 [Vitis vinifera]	[more]
CAN75478.1	7.6e-27	59.09	hypothetical protein VITISV_020209 [Vitis vinifera]	[more]
CAN73795.1	3.2e-25	57.27	hypothetical protein VITISV_036649 [Vitis vinifera]	[more]
XP_020978287.1	2.7e-24	54.55	uncharacterized protein LOC110271621 [Arachis ipaensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013103	RVT_2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi05M000938	Bhi05M000938	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 47..111 e-value: 1.4E-17 score: 64.1
None	No IPR available	PANTHER	PTHR11439:SF204	SUBFAMILY NOT NAMED	coord: 18..112
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 18..112

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi05G000938	Wax gourd	wgowgoB056
Bhi05G000938	Cucumber (Gy14) v1	cgywgoB448
Bhi05G000938	Cucumber (Gy14) v1	cgywgoB494
Bhi05G000938	Cucumber (Gy14) v2	cgybwgoB298
Bhi05G000938	Cucumber (Gy14) v2	cgybwgoB643
Bhi05G000938	Cucurbita maxima (Rimu)	cmawgoB0122
Bhi05G000938	Cucurbita maxima (Rimu)	cmawgoB0445
Bhi05G000938	Cucurbita maxima (Rimu)	cmawgoB0642
Bhi05G000938	Cucurbita maxima (Rimu)	cmawgoB0656
Bhi05G000938	Cucurbita maxima (Rimu)	cmawgoB0859
Bhi05G000938	Cucurbita moschata (Rifu)	cmowgoB0110
Bhi05G000938	Cucurbita moschata (Rifu)	cmowgoB0442
Bhi05G000938	Cucurbita moschata (Rifu)	cmowgoB0657
Bhi05G000938	Cucurbita moschata (Rifu)	cmowgoB0856
Bhi05G000938	Cucurbita pepo (Zucchini)	cpewgoB0302
Bhi05G000938	Cucurbita pepo (Zucchini)	cpewgoB0330
Bhi05G000938	Cucurbita pepo (Zucchini)	cpewgoB0524
Bhi05G000938	Cucurbita pepo (Zucchini)	cpewgoB0845
Bhi05G000938	Cucumber (Chinese Long) v3	cucwgoB313
Bhi05G000938	Wild cucumber (PI 183967)	cpiwgoB311
Bhi05G000938	Wild cucumber (PI 183967)	cpiwgoB683
Bhi05G000938	Cucumber (Chinese Long) v3	cucwgoB697
Bhi05G000938	Cucumber (Chinese Long) v2	cuwgoB308
Bhi05G000938	Cucumber (Chinese Long) v2	cuwgoB672
Bhi05G000938	Bottle gourd (USVL1VR-Ls)	lsiwgoB316
Bhi05G000938	Bottle gourd (USVL1VR-Ls)	lsiwgoB458
Bhi05G000938	Melon (DHL92) v3.6.1	medwgoB215
Bhi05G000938	Melon (DHL92) v3.6.1	medwgoB558
Bhi05G000938	Melon (DHL92) v3.5.1	mewgoB215
Bhi05G000938	Melon (DHL92) v3.5.1	mewgoB553
Bhi05G000938	Watermelon (Charleston Gray)	wcgwgoB267
Bhi05G000938	Watermelon (Charleston Gray)	wcgwgoB448
Bhi05G000938	Watermelon (97103) v2	wgowmbB242
Bhi05G000938	Watermelon (97103) v2	wgowmbB258
Bhi05G000938	Watermelon (97103) v1	wgowmB271
Bhi05G000938	Watermelon (97103) v1	wgowmB273
Bhi05G000938	Silver-seed gourd	carwgoB0259
Bhi05G000938	Silver-seed gourd	carwgoB0462
Bhi05G000938	Silver-seed gourd	carwgoB0937