Bhi03M002325 (mRNA) Wax gourd
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGCTAATGCACTCGAAGTTGCAAAAAATTCGAGCGCTAAGCCATAGACGCGCTACAAAACTGATCTTCCTTTTTTCATTCCGGGCCCTAATTCGCTTTCATCCCTCTAGTCTCTGTTTAACTCTTTCCAATTCCTACAGGTTTTTCTTCTCCCTTTTCAATCTATTCCATGCTTTCGATTTCTTTGCCTGTAATTTTCTCTTGATTTTCGGAGGATCTGCGTAGTCTGTACAACTCTTTGTGATTGAAACTTCATTGCACGCAAGTTGTTTGATAAAATTCCCAAGAATCGATGCCCAGGTCTTGTGCAGGGCTTTCTGTTTTTCATTTTTTTTTTTAAACTTCATTCAACGGCTGAGTAAACGATTTTTATGTTATTTTTCAGTGGAGGAGGAAGTAAACTAGTTGTGCAGAAAAATGCTTCCAAAACGGATGAAGATGGCCATTACAGATAACCCAAAGAAGCTTGCCAACTTGATTGATCTCGTAAATCTTCCTTCAACTCTCAGGGAGTTTGTGGGCCAGTCCCAAATTTCTCGTCTAGGCTGTTTCAAGTGTGTGTGGTCATATATCAAAACCAACAATCTTCAGGTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTAGATGCATATTGATTTTGCTGCTATCAACCTGACAGAGACCTCCCTTATTTAATCTACTTCCAAATATCTGTTGTAGATTCTACGTTTTGTGCTGGTTAAATTATAGATTAAAAATGGGGAACAGGGTAGGAGAAGATTGATCATATGTTTGAATACTCAAGATGAAAGTTATGAGAAACTGATGGTGGGTCAAGGTCGAAGACAAAATACACTCAATAGAACCATCTTTTTGCAAGGTAAAATTGTATGAGAAAGAGGTTACAAAGAGAGTCTGATAGAACCCAAATAGAACTAGAATGATACTGAAACGTAAAAGAGAGAACAGTTACAAGATAACTCAAGTATTCAAGGTACTTGGAAGTTTGGAACGTCGTCCCCGACTCAAGTCAAAACCATAGAAACTATCTGAGCAATTCTCTACTTTCATCCTTTAGCACTCACCTTATCTGTAACTAATCCCCCCAACAGTATGTTCTAATAATATTCCTAACTACTCCTTGTTGCATTGCTATAGAAGATGAGATCCTCTGAACAATTTTTCAACCATAGGGTCACACCCGTATGAACCCATCTCTCAAGCTTGTCTGCCTTACCACAAATGCCAATAACAAATATTTTTTCTTATTAAATAAGACCAAACCTATGAAGTCCTATTAAGGCTCCCAAAGGACAACCTCTCCTTATGCATAAGGAAATACTTAAATTGTATTATAAACTAAAAATGAGTAAGATGGACGATTTTTGTCCCTCCCAGCAAGCAACCCTTCTACTAAACCTTTATCCATGCCTCTCAAAAAAAAAAAAAAAATAGTTCTTGATTTTACTTGTAAAATAGCCTTTTGATTTTTGCACCAGTTTGCGGTACACTTTATGACTCTCCAAATGTCATATGATATGATCTTGGGAAGCTAGAAGTACTTGAAACTTTAATGAAGGAGCACTTCTTTTGACTTAAGTGTTATAAATATGTTTCTGCTGATCTATAAGTAGCTTTCTTTATTCTGATAAAAGGTCATGGATATGTATTTTTCTTGTCTAGGATCCTACCAACAAGAATGTGGTCATTTGTGATGAGAAGTTAAAGAGTATATTGCTAGGCAAGCCCAAGGTTGAGTTAGCCGAACTTCCTGCACTGATTAAATTACATTTTCCCAAAAATCCCAAGTGAGTTATACTTGTAGTTTAACCTCTGGCAGCTCCAGAGTGACATCTTCACATCGCCAATGCTTAGAATGTTTAGCCTCAATTTTGTATAACTGTCCTACTAGGTCTCTTTCTCAAATATTGTCGGGAAATTATTTGACTTAACTCTCTTTTTGTGCCTCATGTCCTTTTGTATATTATATTTGGCTTCACTTGACATTTTATAATTTTTAAATTTTTGTGCATTGTTCTCAATTAACATGGAATTGATTGGAACTTTTGTACACATATGATGGAACTTTAACAAAAGTTCGAACTTGATCCAAAACTTTTATAATGGAAACAAAAGAGAAGCAGCAAAGCGAATGAGGTGAAACATAATTAAACAATGTTCATCCAATCTTTGGTTCCTATGCATCATATCGTTTCACTCTCATTTGCAATCTCTTCTTTGTTCCCTCTCACTACTGCTCTGTACTGCTATACTGCAATTCATCAATATCATATGGAGCTGTAATTAGCTCGTTGAAAGGAAAATAATTACATTTCAATTGCCAAAATCATTTGGAATTGAACACGGTTTATTTGACTTTTGCTACAAACAATGTTTGATACATTTGTGTGTTCTGC TGCTAATGCACTCGAAGTTGCAAAAAATTCGAGCGCTAAGCCATAGACGCGCTACAAAACTGATCTTCCTTTTTTCATTCCGGGCCCTAATTCGCTTTCATCCCTCTAGTCTCTGTTTAACTCTTTCCAATTCCTACAGGTTTTTCTTCTCCCTTTTCAATCTATTCCATGCTTTCGATTTCTTTGCCTGTAATTTTCTCTTGATTTTCGGAGGATCTGCGTAGTCTGTACAACTCTTTGTGATTGAAACTTCATTGCACGCAAGTTGTTTGATAAAATTCCCAAGAATCGATGCCCAGTGGAGGAGGAAGTAAACTAGTTGTGCAGAAAAATGCTTCCAAAACGGATGAAGATGGCCATTACAGATAACCCAAAGAAGCTTGCCAACTTGATTGATCTCGTAAATCTTCCTTCAACTCTCAGGGAGTTTGTGGGCCAGTCCCAAATTTCTCGTCTAGGCTGTTTCAAGTGTGTGTGGTCATATATCAAAACCAACAATCTTCAGGATCCTACCAACAAGAATGTGGTCATTTGTGATGAGAAGTTAAAGAGTATATTGCTAGGCAAGCCCAAGGTTGAGTTAGCCGAACTTCCTGCACTGATTAAATTACATTTTCCCAAAAATCCCAAGTGAGTTATACTTGTAGTTTAACCTCTGGCAGCTCCAGAGTGACATCTTCACATCGCCAATGCTTAGAATGTTTAGCCTCAATTTTGTATAACTGTCCTACTAGGTCTCTTTCTCAAATATTGTCGGGAAATTATTTGACTTAACTCTCTTTTTGTGCCTCATGTCCTTTTGTATATTATATTTGGCTTCACTTGACATTTTATAATTTTTAAATTTTTGTGCATTGTTCTCAATTAACATGGAATTGATTGGAACTTTTGTACACATATGATGGAACTTTAACAAAAGTTCGAACTTGATCCAAAACTTTTATAATGGAAACAAAAGAGAAGCAGCAAAGCGAATGAGGTGAAACATAATTAAACAATGTTCATCCAATCTTTGGTTCCTATGCATCATATCGTTTCACTCTCATTTGCAATCTCTTCTTTGTTCCCTCTCACTACTGCTCTGTACTGCTATACTGCAATTCATCAATATCATATGGAGCTGTAATTAGCTCGTTGAAAGGAAAATAATTACATTTCAATTGCCAAAATCATTTGGAATTGAACACGGTTTATTTGACTTTTGCTACAAACAATGTTTGATACATTTGTGTGTTCTGC ATGCTTCCAAAACGGATGAAGATGGCCATTACAGATAACCCAAAGAAGCTTGCCAACTTGATTGATCTCGTAAATCTTCCTTCAACTCTCAGGGAGTTTGTGGGCCAGTCCCAAATTTCTCGTCTAGGCTGTTTCAAGTGTGTGTGGTCATATATCAAAACCAACAATCTTCAGGATCCTACCAACAAGAATGTGGTCATTTGTGATGAGAAGTTAAAGAGTATATTGCTAGGCAAGCCCAAGGTTGAGTTAGCCGAACTTCCTGCACTGATTAAATTACATTTTCCCAAAAATCCCAAGTGA MLPKRMKMAITDNPKKLANLIDLVNLPSTLREFVGQSQISRLGCFKCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK
BLAST of Bhi03M002325 vs. Swiss-Prot
Match: sp|O74503|UAF30_SCHPO (Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=spp27 PE=1 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 5.3e-07 Identity = 22/44 (50.00%), Postives = 32/44 (72.73%), Query Frame = 0
BLAST of Bhi03M002325 vs. Swiss-Prot
Match: sp|Q08747|UAF30_YEAST (Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UAF30 PE=1 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 5.3e-07 Identity = 26/77 (33.77%), Postives = 47/77 (61.04%), Query Frame = 0
BLAST of Bhi03M002325 vs. Swiss-Prot
Match: sp|Q05024|TRI1_YEAST (Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TRI1 PE=1 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 1.3e-05 Identity = 24/71 (33.80%), Postives = 44/71 (61.97%), Query Frame = 0
BLAST of Bhi03M002325 vs. TAIR10
Match: AT4G26810.1 (SWIB/MDM2 domain superfamily protein) HSP 1 Score: 173.3 bits (438), Expect = 7.4e-44 Identity = 85/100 (85.00%), Postives = 90/100 (90.00%), Query Frame = 0
BLAST of Bhi03M002325 vs. TAIR10
Match: AT2G35605.1 (SWIB/MDM2 domain superfamily protein) HSP 1 Score: 77.8 bits (190), Expect = 4.2e-15 Identity = 33/79 (41.77%), Postives = 51/79 (64.56%), Query Frame = 0
BLAST of Bhi03M002325 vs. TAIR10
Match: AT1G31760.1 (SWIB/MDM2 domain superfamily protein) HSP 1 Score: 70.9 bits (172), Expect = 5.2e-13 Identity = 31/69 (44.93%), Postives = 45/69 (65.22%), Query Frame = 0
BLAST of Bhi03M002325 vs. TAIR10
Match: AT4G34290.1 (SWIB/MDM2 domain superfamily protein) HSP 1 Score: 65.5 bits (158), Expect = 2.2e-11 Identity = 30/66 (45.45%), Postives = 42/66 (63.64%), Query Frame = 0
BLAST of Bhi03M002325 vs. TAIR10
Match: AT3G03590.1 (SWIB/MDM2 domain superfamily protein) HSP 1 Score: 63.9 bits (154), Expect = 6.3e-11 Identity = 29/68 (42.65%), Postives = 42/68 (61.76%), Query Frame = 0
BLAST of Bhi03M002325 vs. TrEMBL
Match: tr|A0A1S3BL41|A0A1S3BL41_CUCME (upstream activation factor subunit spp27 OS=Cucumis melo OX=3656 GN=LOC103491221 PE=4 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 3.9e-47 Identity = 95/100 (95.00%), Postives = 98/100 (98.00%), Query Frame = 0
BLAST of Bhi03M002325 vs. TrEMBL
Match: tr|A0A0A0L2E1|A0A0A0L2E1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G493210 PE=4 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 1.1e-46 Identity = 96/100 (96.00%), Postives = 96/100 (96.00%), Query Frame = 0
BLAST of Bhi03M002325 vs. TrEMBL
Match: tr|A0A151SBL4|A0A151SBL4_CAJCA (Upstream activation factor subunit UAF30 OS=Cajanus cajan OX=3821 GN=KK1_025905 PE=4 SV=1) HSP 1 Score: 189.9 bits (481), Expect = 2.8e-45 Identity = 91/100 (91.00%), Postives = 96/100 (96.00%), Query Frame = 0
BLAST of Bhi03M002325 vs. TrEMBL
Match: tr|C6T3J2|C6T3J2_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100527179 PE=2 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 1.1e-44 Identity = 91/100 (91.00%), Postives = 95/100 (95.00%), Query Frame = 0
BLAST of Bhi03M002325 vs. TrEMBL
Match: tr|I1N0J4|I1N0J4_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100775234 PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 4.0e-44 Identity = 91/100 (91.00%), Postives = 94/100 (94.00%), Query Frame = 0
BLAST of Bhi03M002325 vs. NCBI nr
Match: XP_008449303.1 (PREDICTED: upstream activation factor subunit spp27 [Cucumis melo] >XP_008449304.1 PREDICTED: upstream activation factor subunit spp27 [Cucumis melo] >XP_008449305.1 PREDICTED: upstream activation factor subunit spp27 [Cucumis melo]) HSP 1 Score: 196.1 bits (497), Expect = 5.9e-47 Identity = 95/100 (95.00%), Postives = 98/100 (98.00%), Query Frame = 0
BLAST of Bhi03M002325 vs. NCBI nr
Match: XP_011653889.1 (PREDICTED: upstream activation factor subunit spp27 [Cucumis sativus]) HSP 1 Score: 194.5 bits (493), Expect = 1.7e-46 Identity = 96/100 (96.00%), Postives = 96/100 (96.00%), Query Frame = 0
BLAST of Bhi03M002325 vs. NCBI nr
Match: KGN54777.1 (hypothetical protein Csa_4G493210 [Cucumis sativus]) HSP 1 Score: 194.5 bits (493), Expect = 1.7e-46 Identity = 96/100 (96.00%), Postives = 96/100 (96.00%), Query Frame = 0
BLAST of Bhi03M002325 vs. NCBI nr
Match: XP_022928748.1 (upstream activation factor subunit UAF30 [Cucurbita moschata] >XP_022928749.1 upstream activation factor subunit UAF30 [Cucurbita moschata]) HSP 1 Score: 193.0 bits (489), Expect = 5.0e-46 Identity = 95/100 (95.00%), Postives = 97/100 (97.00%), Query Frame = 0
BLAST of Bhi03M002325 vs. NCBI nr
Match: XP_022967913.1 (protein TRI1 isoform X1 [Cucurbita maxima]) HSP 1 Score: 192.2 bits (487), Expect = 8.5e-46 Identity = 95/100 (95.00%), Postives = 97/100 (97.00%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
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