Bhi03M000757 (mRNA) Wax gourd

NameBhi03M000757
TypemRNA
OrganismBenincasa hispida (Wax gourd)
DescriptionTransmembrane protein
Locationchr3 : 19589137 .. 19589693 (+)
Sequence length330
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTCTCGTCCATTCACGTTTTTCTCCTCCTCAGTTCTTTAAGAACTCCCTTCGACGAGGAAATTGCCGGCCATAGAACCCACGCGCAACAGCCGCCGCTCAGCACCAGTCGCCGCCGTCGTGCCTCCGCCTCGCCTTCGTCTAGGTGCAGACGGTGGGTTCCGTTTTTCTCTCTCTAACTTGTTTCTGCCGTTCCCCCCCGTGGGCCAGTCCAGTCTCCGTCGGTCCCGTCGTTCTCTCAGTCTGCAGACGTCGCTAATAGGAGAGATTGAGTGTACAAGTTTCTGTGGCTGAGTTGATTAATTGGTGCCCTAAAATCCCATTGTCGATCGTCTTTCCCTTGCGGTTAATTTCAGGCTCCGGCCAAAGAGAAGGACGCCGATGGGGTTTATCAGAAGTAGCTTCTCTTTTATAGCGGGAACGGTGATCGGGATTTACGTGGCTCAAAATTACAACGTTCCCAACATCAGGAAGCTCGCCAATACCGGGCTTGTGATGGCCAAGCACATCGAAGAGAATTACAGGAAGCCAAAGAAGAGGGAGGATGATGATTGA

mRNA sequence

ATGCTTCTCGAAATTGCCGGCCATAGAACCCACGCGCAACAGCCGCCGCTCAGCACCAGTCGCCGCCGTCGTGCCTCCGCCTCGCCTTCGTCTAGGTGCAGACGGTGGTCTCCGTCGGTCCCGTCGTTCTCTCAGTCTGCAGACAGAAGGACGCCGATGGGGTTTATCAGAAGTAGCTTCTCTTTTATAGCGGGAACGGTGATCGGGATTTACGTGGCTCAAAATTACAACGTTCCCAACATCAGGAAGCTCGCCAATACCGGGCTTGTGATGGCCAAGCACATCGAAGAGAATTACAGGAAGCCAAAGAAGAGGGAGGATGATGATTGA

Coding sequence (CDS)

ATGCTTCTCGAAATTGCCGGCCATAGAACCCACGCGCAACAGCCGCCGCTCAGCACCAGTCGCCGCCGTCGTGCCTCCGCCTCGCCTTCGTCTAGGTGCAGACGGTGGTCTCCGTCGGTCCCGTCGTTCTCTCAGTCTGCAGACAGAAGGACGCCGATGGGGTTTATCAGAAGTAGCTTCTCTTTTATAGCGGGAACGGTGATCGGGATTTACGTGGCTCAAAATTACAACGTTCCCAACATCAGGAAGCTCGCCAATACCGGGCTTGTGATGGCCAAGCACATCGAAGAGAATTACAGGAAGCCAAAGAAGAGGGAGGATGATGATTGA

Protein sequence

MLLEIAGHRTHAQQPPLSTSRRRRASASPSSRCRRWSPSVPSFSQSADRRTPMGFIRSSFSFIAGTVIGIYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD
BLAST of Bhi03M000757 vs. TAIR10
Match: AT2G35736.1 (unknown protein)

HSP 1 Score: 90.9 bits (224), Expect = 5.3e-19
Identity = 41/52 (78.85%), Postives = 46/52 (88.46%), Query Frame = 0

Query: 53  MGFIRSSFSFIAGTVIGIYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKK 105
           MG  RS FSFI G+V G+Y+AQNYNVPNIRKL NTGLV+AKH+EENYRKPKK
Sbjct: 1   MGIFRSCFSFITGSVFGVYLAQNYNVPNIRKLTNTGLVVAKHVEENYRKPKK 52

BLAST of Bhi03M000757 vs. TAIR10
Match: AT4G25225.1 (unknown protein)

HSP 1 Score: 81.3 bits (199), Expect = 4.2e-16
Identity = 38/55 (69.09%), Postives = 44/55 (80.00%), Query Frame = 0

Query: 53  MGFIRSSFSFIAGTVIGIYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKRED 108
           MG IRSSFSFI GTV GIY+AQ YNVPNI+KL +  + MAK +EE YRKPK R+D
Sbjct: 1   MGIIRSSFSFIMGTVCGIYIAQTYNVPNIKKLGHCAVSMAKQVEEKYRKPKSRDD 55

BLAST of Bhi03M000757 vs. TrEMBL
Match: tr|A0A1S3B1N0|A0A1S3B1N0_CUCME (uncharacterized protein LOC103484824 OS=Cucumis melo OX=3656 GN=LOC103484824 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.1e-21
Identity = 53/57 (92.98%), Postives = 55/57 (96.49%), Query Frame = 0

Query: 53  MGFIRSSFSFIAGTVIGIYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD 110
           MGFIRSSFSFIAG+V GIYVAQNYNVPNIRKLANTGL MAKHIEENYRKPKKR+DDD
Sbjct: 1   MGFIRSSFSFIAGSVFGIYVAQNYNVPNIRKLANTGLAMAKHIEENYRKPKKRDDDD 57

BLAST of Bhi03M000757 vs. TrEMBL
Match: tr|A0A2C9WCZ4|A0A2C9WCZ4_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G038600 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 6.4e-19
Identity = 48/57 (84.21%), Postives = 53/57 (92.98%), Query Frame = 0

Query: 53  MGFIRSSFSFIAGTVIGIYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD 110
           MG IRS FSFIAGTV GIYVAQNYNVPNIRKL NTGL++AKH+EENYRKPKKR+DD+
Sbjct: 1   MGIIRSGFSFIAGTVFGIYVAQNYNVPNIRKLTNTGLLIAKHMEENYRKPKKRDDDE 57

BLAST of Bhi03M000757 vs. TrEMBL
Match: tr|F6I385|F6I385_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0048g00610 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 8.3e-19
Identity = 47/57 (82.46%), Postives = 51/57 (89.47%), Query Frame = 0

Query: 53  MGFIRSSFSFIAGTVIGIYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD 110
           MG IRSSF F+ GTV G+Y+AQNYNVPN+RKLANTGLVMAKHIEENYRKPKK  DDD
Sbjct: 1   MGIIRSSFMFMVGTVCGVYIAQNYNVPNVRKLANTGLVMAKHIEENYRKPKKNRDDD 57

BLAST of Bhi03M000757 vs. TrEMBL
Match: tr|A0A2I0IC64|A0A2I0IC64_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_038083 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.4e-18
Identity = 45/57 (78.95%), Postives = 52/57 (91.23%), Query Frame = 0

Query: 53  MGFIRSSFSFIAGTVIGIYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD 110
           MGFIRS+FSF+ GT  G+Y AQNYNVPN+RKL +TGLVMAKHIEENYRKPK+R+DDD
Sbjct: 1   MGFIRSTFSFLLGTAFGVYAAQNYNVPNVRKLIDTGLVMAKHIEENYRKPKRRDDDD 57

BLAST of Bhi03M000757 vs. TrEMBL
Match: tr|A0A1S8ACQ0|A0A1S8ACQ0_CITLI (Uncharacterized protein OS=Citrus limon OX=2708 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.2e-18
Identity = 46/57 (80.70%), Postives = 52/57 (91.23%), Query Frame = 0

Query: 53  MGFIRSSFSFIAGTVIGIYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD 110
           MG IRSSFSFI GTV G+Y+AQNYNVPNI+KLANTGL MAKHIEE YRKPK+++DDD
Sbjct: 1   MGIIRSSFSFIMGTVCGVYIAQNYNVPNIKKLANTGLYMAKHIEEKYRKPKRKDDDD 57

BLAST of Bhi03M000757 vs. NCBI nr
Match: XP_022132505.1 (uncharacterized protein LOC111005345 [Momordica charantia])

HSP 1 Score: 112.5 bits (280), Expect = 9.3e-22
Identity = 54/57 (94.74%), Postives = 57/57 (100.00%), Query Frame = 0

Query: 53  MGFIRSSFSFIAGTVIGIYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD 110
           MGFIRSSFSFIAGTV+GIYVAQNYNVPNIRKLANTGLV+AKHIEENYRKPKKR+DDD
Sbjct: 1   MGFIRSSFSFIAGTVLGIYVAQNYNVPNIRKLANTGLVVAKHIEENYRKPKKRDDDD 57

BLAST of Bhi03M000757 vs. NCBI nr
Match: XP_008440344.1 (PREDICTED: uncharacterized protein LOC103484824 [Cucumis melo])

HSP 1 Score: 110.2 bits (274), Expect = 4.6e-21
Identity = 53/57 (92.98%), Postives = 55/57 (96.49%), Query Frame = 0

Query: 53  MGFIRSSFSFIAGTVIGIYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD 110
           MGFIRSSFSFIAG+V GIYVAQNYNVPNIRKLANTGL MAKHIEENYRKPKKR+DDD
Sbjct: 1   MGFIRSSFSFIAGSVFGIYVAQNYNVPNIRKLANTGLAMAKHIEENYRKPKKRDDDD 57

BLAST of Bhi03M000757 vs. NCBI nr
Match: XP_022963418.1 (uncharacterized protein LOC111463630 [Cucurbita moschata] >XP_022963419.1 uncharacterized protein LOC111463630 [Cucurbita moschata] >XP_023003118.1 uncharacterized protein LOC111496825 [Cucurbita maxima] >XP_023003120.1 uncharacterized protein LOC111496825 [Cucurbita maxima])

HSP 1 Score: 109.0 bits (271), Expect = 1.0e-20
Identity = 52/57 (91.23%), Postives = 55/57 (96.49%), Query Frame = 0

Query: 53  MGFIRSSFSFIAGTVIGIYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD 110
           MGFIRSSFSFI GTV GIYVAQNY+VPNIRKLANTG++MAKHIEENYRKPKKREDDD
Sbjct: 1   MGFIRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD 57

BLAST of Bhi03M000757 vs. NCBI nr
Match: XP_011657883.1 (PREDICTED: uncharacterized protein LOC101209935 [Cucumis sativus])

HSP 1 Score: 108.6 bits (270), Expect = 1.3e-20
Identity = 52/57 (91.23%), Postives = 55/57 (96.49%), Query Frame = 0

Query: 53  MGFIRSSFSFIAGTVIGIYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD 110
           MGFIRSSFSFIAG+V GIYVAQNYNVPNIRKLANTGL MAKHIEENYRKPKKR+DD+
Sbjct: 1   MGFIRSSFSFIAGSVFGIYVAQNYNVPNIRKLANTGLAMAKHIEENYRKPKKRDDDE 57

BLAST of Bhi03M000757 vs. NCBI nr
Match: XP_022949611.1 (uncharacterized protein LOC111452953 [Cucurbita moschata] >XP_022949613.1 uncharacterized protein LOC111452953 [Cucurbita moschata] >XP_022978971.1 uncharacterized protein LOC111478763 [Cucurbita maxima] >XP_022978972.1 uncharacterized protein LOC111478763 [Cucurbita maxima] >XP_023543115.1 uncharacterized protein LOC111803077 [Cucurbita pepo subsp. pepo] >XP_023543116.1 uncharacterized protein LOC111803077 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 108.6 bits (270), Expect = 1.3e-20
Identity = 52/57 (91.23%), Postives = 54/57 (94.74%), Query Frame = 0

Query: 53  MGFIRSSFSFIAGTVIGIYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD 110
           MG IRS FS IAGTV+GIY+AQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD
Sbjct: 1   MGIIRSGFSLIAGTVLGIYIAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD 57

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
AT2G35736.15.3e-1978.85unknown protein[more]
AT4G25225.14.2e-1669.09unknown protein[more]
Match NameE-valueIdentityDescription
tr|A0A1S3B1N0|A0A1S3B1N0_CUCME3.1e-2192.98uncharacterized protein LOC103484824 OS=Cucumis melo OX=3656 GN=LOC103484824 PE=... [more]
tr|A0A2C9WCZ4|A0A2C9WCZ4_MANES6.4e-1984.21Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G038600 PE=4 SV=... [more]
tr|F6I385|F6I385_VITVI8.3e-1982.46Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0048g00610 PE=4 SV=... [more]
tr|A0A2I0IC64|A0A2I0IC64_PUNGR2.4e-1878.95Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_038083 PE=4 SV=1[more]
tr|A0A1S8ACQ0|A0A1S8ACQ0_CITLI3.2e-1880.70Uncharacterized protein OS=Citrus limon OX=2708 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_022132505.19.3e-2294.74uncharacterized protein LOC111005345 [Momordica charantia][more]
XP_008440344.14.6e-2192.98PREDICTED: uncharacterized protein LOC103484824 [Cucumis melo][more]
XP_022963418.11.0e-2091.23uncharacterized protein LOC111463630 [Cucurbita moschata] >XP_022963419.1 unchar... [more]
XP_011657883.11.3e-2091.23PREDICTED: uncharacterized protein LOC101209935 [Cucumis sativus][more]
XP_022949611.11.3e-2091.23uncharacterized protein LOC111452953 [Cucurbita moschata] >XP_022949613.1 unchar... [more]
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR027854STMP1

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Bhi03G000757Bhi03G000757gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi03M000757.exon1Bhi03M000757.exon1exon
Bhi03M000757.exon2Bhi03M000757.exon2exon
Bhi03M000757.exon3Bhi03M000757.exon3exon
Bhi03M000757.exon4Bhi03M000757.exon4exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Bhi03M000757cds.Bhi03M000757CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Bhi03M000757Bhi03M000757-proteinpolypeptide


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027854Short transmembrane mitochondrial protein 1PFAMPF15054DUF4535coord: 58..102
e-value: 5.5E-24
score: 83.5
IPR027854Short transmembrane mitochondrial protein 1PANTHERPTHR33528FAMILY NOT NAMEDcoord: 53..109
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..49
NoneNo IPR availablePANTHERPTHR33528:SF1SUBFAMILY NOT NAMEDcoord: 53..109