Bhi03G000757 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi03G000757
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Transmembrane protein
Location	chr3 : 19589137 .. 19589693 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTCTCGTCCATTCACGTTTTTCTCCTCCTCAGTTCTTTAAGAACTCCCTTCGACGAGGAAATTGCCGGCCATAGAACCCACGCGCAACAGCCGCCGCTCAGCACCAGTCGCCGCCGTCGTGCCTCCGCCTCGCCTTCGTCTAGGTGCAGACGGTGGGTTCCGTTTTTCTCTCTCTAACTTGTTTCTGCCGTTCCCCCCCGTGGGCCAGTCCAGTCTCCGTCGGTCCCGTCGTTCTCTCAGTCTGCAGACGTCGCTAATAGGAGAGATTGAGTGTACAAGTTTCTGTGGCTGAGTTGATTAATTGGTGCCCTAAAATCCCATTGTCGATCGTCTTTCCCTTGCGGTTAATTTCAGGCTCCGGCCAAAGAGAAGGACGCCGATGGGGTTTATCAGAAGTAGCTTCTCTTTTATAGCGGGAACGGTGATCGGGATTTACGTGGCTCAAAATTACAACGTTCCCAACATCAGGAAGCTCGCCAATACCGGGCTTGTGATGGCCAAGCACATCGAAGAGAATTACAGGAAGCCAAAGAAGAGGGAGGATGATGATTGA

mRNA sequence

ATGCTTCTCGAAATTGCCGGCCATAGAACCCACGCGCAACAGCCGCCGCTCAGCACCAGTCGCCGCCGTCGTGCCTCCGCCTCGCCTTCGTCTAGGTGCAGACGGTGGTCTCCGTCGGTCCCGTCGTTCTCTCAGTCTGCAGACAGAAGGACGCCGATGGGGTTTATCAGAAGTAGCTTCTCTTTTATAGCGGGAACGGTGATCGGGATTTACGTGGCTCAAAATTACAACGTTCCCAACATCAGGAAGCTCGCCAATACCGGGCTTGTGATGGCCAAGCACATCGAAGAGAATTACAGGAAGCCAAAGAAGAGGGAGGATGATGATTGA

Coding sequence (CDS)

ATGCTTCTCGAAATTGCCGGCCATAGAACCCACGCGCAACAGCCGCCGCTCAGCACCAGTCGCCGCCGTCGTGCCTCCGCCTCGCCTTCGTCTAGGTGCAGACGGTGGTCTCCGTCGGTCCCGTCGTTCTCTCAGTCTGCAGACAGAAGGACGCCGATGGGGTTTATCAGAAGTAGCTTCTCTTTTATAGCGGGAACGGTGATCGGGATTTACGTGGCTCAAAATTACAACGTTCCCAACATCAGGAAGCTCGCCAATACCGGGCTTGTGATGGCCAAGCACATCGAAGAGAATTACAGGAAGCCAAAGAAGAGGGAGGATGATGATTGA

Protein sequence

MLLEIAGHRTHAQQPPLSTSRRRRASASPSSRCRRWSPSVPSFSQSADRRTPMGFIRSSFSFIAGTVIGIYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD

Homology

[Close]

BLAST of Bhi03G000757 vs. TAIR10
Match: AT2G35736.1 (unknown protein)

HSP 1 Score: 90.9 bits (224), Expect = 5.3e-19
Identity = 41/52 (78.85%), Postives = 46/52 (88.46%), Query Frame = 0


Query: 53  MGFIRSSFSFIAGTVIGIYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKK 105
           MG  RS FSFI G+V G+Y+AQNYNVPNIRKL NTGLV+AKH+EENYRKPKK
Sbjct: 1   MGIFRSCFSFITGSVFGVYLAQNYNVPNIRKLTNTGLVVAKHVEENYRKPKK 52

[Close]

BLAST of Bhi03G000757 vs. TAIR10
Match: AT4G25225.1 (unknown protein)

HSP 1 Score: 81.3 bits (199), Expect = 4.2e-16
Identity = 38/55 (69.09%), Postives = 44/55 (80.00%), Query Frame = 0


Query: 53  MGFIRSSFSFIAGTVIGIYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKRED 108
           MG IRSSFSFI GTV GIY+AQ YNVPNI+KL +  + MAK +EE YRKPK R+D
Sbjct: 1   MGIIRSSFSFIMGTVCGIYIAQTYNVPNIKKLGHCAVSMAKQVEEKYRKPKSRDD 55

[Close]

BLAST of Bhi03G000757 vs. TrEMBL
Match: tr|A0A1S3B1N0|A0A1S3B1N0_CUCME (uncharacterized protein LOC103484824 OS=Cucumis melo OX=3656 GN=LOC103484824 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.1e-21
Identity = 53/57 (92.98%), Postives = 55/57 (96.49%), Query Frame = 0


Query: 53  MGFIRSSFSFIAGTVIGIYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD 110
           MGFIRSSFSFIAG+V GIYVAQNYNVPNIRKLANTGL MAKHIEENYRKPKKR+DDD
Sbjct: 1   MGFIRSSFSFIAGSVFGIYVAQNYNVPNIRKLANTGLAMAKHIEENYRKPKKRDDDD 57

[Close]

BLAST of Bhi03G000757 vs. TrEMBL
Match: tr|A0A2C9WCZ4|A0A2C9WCZ4_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G038600 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 6.4e-19
Identity = 48/57 (84.21%), Postives = 53/57 (92.98%), Query Frame = 0


Query: 53  MGFIRSSFSFIAGTVIGIYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD 110
           MG IRS FSFIAGTV GIYVAQNYNVPNIRKL NTGL++AKH+EENYRKPKKR+DD+
Sbjct: 1   MGIIRSGFSFIAGTVFGIYVAQNYNVPNIRKLTNTGLLIAKHMEENYRKPKKRDDDE 57

[Close]

BLAST of Bhi03G000757 vs. TrEMBL
Match: tr|F6I385|F6I385_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0048g00610 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 8.3e-19
Identity = 47/57 (82.46%), Postives = 51/57 (89.47%), Query Frame = 0


Query: 53  MGFIRSSFSFIAGTVIGIYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD 110
           MG IRSSF F+ GTV G+Y+AQNYNVPN+RKLANTGLVMAKHIEENYRKPKK  DDD
Sbjct: 1   MGIIRSSFMFMVGTVCGVYIAQNYNVPNVRKLANTGLVMAKHIEENYRKPKKNRDDD 57

[Close]

BLAST of Bhi03G000757 vs. TrEMBL
Match: tr|A0A2I0IC64|A0A2I0IC64_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_038083 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.4e-18
Identity = 45/57 (78.95%), Postives = 52/57 (91.23%), Query Frame = 0


Query: 53  MGFIRSSFSFIAGTVIGIYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD 110
           MGFIRS+FSF+ GT  G+Y AQNYNVPN+RKL +TGLVMAKHIEENYRKPK+R+DDD
Sbjct: 1   MGFIRSTFSFLLGTAFGVYAAQNYNVPNVRKLIDTGLVMAKHIEENYRKPKRRDDDD 57

[Close]

BLAST of Bhi03G000757 vs. TrEMBL
Match: tr|A0A1S8ACQ0|A0A1S8ACQ0_CITLI (Uncharacterized protein OS=Citrus limon OX=2708 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.2e-18
Identity = 46/57 (80.70%), Postives = 52/57 (91.23%), Query Frame = 0


Query: 53  MGFIRSSFSFIAGTVIGIYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD 110
           MG IRSSFSFI GTV G+Y+AQNYNVPNI+KLANTGL MAKHIEE YRKPK+++DDD
Sbjct: 1   MGIIRSSFSFIMGTVCGVYIAQNYNVPNIKKLANTGLYMAKHIEEKYRKPKRKDDDD 57

[Close]

BLAST of Bhi03G000757 vs. NCBI nr
Match: XP_022132505.1 (uncharacterized protein LOC111005345 [Momordica charantia])

HSP 1 Score: 112.5 bits (280), Expect = 9.3e-22
Identity = 54/57 (94.74%), Postives = 57/57 (100.00%), Query Frame = 0


Query: 53  MGFIRSSFSFIAGTVIGIYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD 110
           MGFIRSSFSFIAGTV+GIYVAQNYNVPNIRKLANTGLV+AKHIEENYRKPKKR+DDD
Sbjct: 1   MGFIRSSFSFIAGTVLGIYVAQNYNVPNIRKLANTGLVVAKHIEENYRKPKKRDDDD 57

[Close]

BLAST of Bhi03G000757 vs. NCBI nr
Match: XP_008440344.1 (PREDICTED: uncharacterized protein LOC103484824 [Cucumis melo])

HSP 1 Score: 110.2 bits (274), Expect = 4.6e-21
Identity = 53/57 (92.98%), Postives = 55/57 (96.49%), Query Frame = 0


Query: 53  MGFIRSSFSFIAGTVIGIYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD 110
           MGFIRSSFSFIAG+V GIYVAQNYNVPNIRKLANTGL MAKHIEENYRKPKKR+DDD
Sbjct: 1   MGFIRSSFSFIAGSVFGIYVAQNYNVPNIRKLANTGLAMAKHIEENYRKPKKRDDDD 57

[Close]

BLAST of Bhi03G000757 vs. NCBI nr
Match: XP_022963418.1 (uncharacterized protein LOC111463630 [Cucurbita moschata] >XP_022963419.1 uncharacterized protein LOC111463630 [Cucurbita moschata] >XP_023003118.1 uncharacterized protein LOC111496825 [Cucurbita maxima] >XP_023003120.1 uncharacterized protein LOC111496825 [Cucurbita maxima])

HSP 1 Score: 109.0 bits (271), Expect = 1.0e-20
Identity = 52/57 (91.23%), Postives = 55/57 (96.49%), Query Frame = 0


Query: 53  MGFIRSSFSFIAGTVIGIYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD 110
           MGFIRSSFSFI GTV GIYVAQNY+VPNIRKLANTG++MAKHIEENYRKPKKREDDD
Sbjct: 1   MGFIRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD 57

[Close]

BLAST of Bhi03G000757 vs. NCBI nr
Match: XP_011657883.1 (PREDICTED: uncharacterized protein LOC101209935 [Cucumis sativus])

HSP 1 Score: 108.6 bits (270), Expect = 1.3e-20
Identity = 52/57 (91.23%), Postives = 55/57 (96.49%), Query Frame = 0


Query: 53  MGFIRSSFSFIAGTVIGIYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD 110
           MGFIRSSFSFIAG+V GIYVAQNYNVPNIRKLANTGL MAKHIEENYRKPKKR+DD+
Sbjct: 1   MGFIRSSFSFIAGSVFGIYVAQNYNVPNIRKLANTGLAMAKHIEENYRKPKKRDDDE 57

[Close]

BLAST of Bhi03G000757 vs. NCBI nr
Match: XP_022949611.1 (uncharacterized protein LOC111452953 [Cucurbita moschata] >XP_022949613.1 uncharacterized protein LOC111452953 [Cucurbita moschata] >XP_022978971.1 uncharacterized protein LOC111478763 [Cucurbita maxima] >XP_022978972.1 uncharacterized protein LOC111478763 [Cucurbita maxima] >XP_023543115.1 uncharacterized protein LOC111803077 [Cucurbita pepo subsp. pepo] >XP_023543116.1 uncharacterized protein LOC111803077 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 108.6 bits (270), Expect = 1.3e-20
Identity = 52/57 (91.23%), Postives = 54/57 (94.74%), Query Frame = 0


Query: 53  MGFIRSSFSFIAGTVIGIYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD 110
           MG IRS FS IAGTV+GIY+AQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD
Sbjct: 1   MGIIRSGFSLIAGTVLGIYIAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD 57

The following BLAST results are available for this feature:

BLAST of Bhi03G000757 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi03G000757 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G35736.1	5.3e-19	78.85	unknown protein	[more]
AT4G25225.1	4.2e-16	69.09	unknown protein	[more]

BLAST of Bhi03G000757 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B1N0\|A0A1S3B1N0_CUCME	3.1e-21	92.98	uncharacterized protein LOC103484824 OS=Cucumis melo OX=3656 GN=LOC103484824 PE=...	[more]
tr\|A0A2C9WCZ4\|A0A2C9WCZ4_MANES	6.4e-19	84.21	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G038600 PE=4 SV=...	[more]
tr\|F6I385\|F6I385_VITVI	8.3e-19	82.46	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0048g00610 PE=4 SV=...	[more]
tr\|A0A2I0IC64\|A0A2I0IC64_PUNGR	2.4e-18	78.95	Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_038083 PE=4 SV=1	[more]
tr\|A0A1S8ACQ0\|A0A1S8ACQ0_CITLI	3.2e-18	80.70	Uncharacterized protein OS=Citrus limon OX=2708 PE=4 SV=1	[more]

BLAST of Bhi03G000757 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022132505.1	9.3e-22	94.74	uncharacterized protein LOC111005345 [Momordica charantia]	[more]
XP_008440344.1	4.6e-21	92.98	PREDICTED: uncharacterized protein LOC103484824 [Cucumis melo]	[more]
XP_022963418.1	1.0e-20	91.23	uncharacterized protein LOC111463630 [Cucurbita moschata] >XP_022963419.1 unchar...	[more]
XP_011657883.1	1.3e-20	91.23	PREDICTED: uncharacterized protein LOC101209935 [Cucumis sativus]	[more]
XP_022949611.1	1.3e-20	91.23	uncharacterized protein LOC111452953 [Cucurbita moschata] >XP_022949613.1 unchar...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR027854	STMP1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi03M000757	Bhi03M000757	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027854	Short transmembrane mitochondrial protein 1	PFAM	PF15054	DUF4535	coord: 58..102 e-value: 5.5E-24 score: 83.5
IPR027854	Short transmembrane mitochondrial protein 1	PANTHER	PTHR33528	FAMILY NOT NAMED	coord: 53..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49
None	No IPR available	PANTHER	PTHR33528:SF1	SUBFAMILY NOT NAMED	coord: 53..109

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi03G000757	Cucurbita maxima (Rimu)	cmawgoB0798
Bhi03G000757	Wax gourd	wgowgoB078
Bhi03G000757	Cucumber (Gy14) v1	cgywgoB151
Bhi03G000757	Cucumber (Gy14) v1	cgywgoB786
Bhi03G000757	Cucumber (Gy14) v2	cgybwgoB182
Bhi03G000757	Cucumber (Gy14) v2	cgybwgoB591
Bhi03G000757	Cucurbita maxima (Rimu)	cmawgoB0217
Bhi03G000757	Cucurbita maxima (Rimu)	cmawgoB0446
Bhi03G000757	Cucurbita maxima (Rimu)	cmawgoB0700
Bhi03G000757	Cucurbita maxima (Rimu)	cmawgoB0768
Bhi03G000757	Cucurbita maxima (Rimu)	cmawgoB0884
Bhi03G000757	Cucurbita maxima (Rimu)	cmawgoB0955
Bhi03G000757	Cucurbita maxima (Rimu)	cmawgoB1070
Bhi03G000757	Cucurbita moschata (Rifu)	cmowgoB0444
Bhi03G000757	Cucurbita moschata (Rifu)	cmowgoB0695
Bhi03G000757	Cucurbita moschata (Rifu)	cmowgoB0759
Bhi03G000757	Cucurbita moschata (Rifu)	cmowgoB0792
Bhi03G000757	Cucurbita moschata (Rifu)	cmowgoB0880
Bhi03G000757	Cucurbita moschata (Rifu)	cmowgoB0955
Bhi03G000757	Cucurbita moschata (Rifu)	cmowgoB1063
Bhi03G000757	Cucurbita pepo (Zucchini)	cpewgoB0084
Bhi03G000757	Cucurbita pepo (Zucchini)	cpewgoB0152
Bhi03G000757	Cucurbita pepo (Zucchini)	cpewgoB0304
Bhi03G000757	Cucurbita pepo (Zucchini)	cpewgoB0370
Bhi03G000757	Cucurbita pepo (Zucchini)	cpewgoB0547
Bhi03G000757	Cucurbita pepo (Zucchini)	cpewgoB0596
Bhi03G000757	Wild cucumber (PI 183967)	cpiwgoB188
Bhi03G000757	Wild cucumber (PI 183967)	cpiwgoB626
Bhi03G000757	Cucumber (Chinese Long) v3	cucwgoB194
Bhi03G000757	Cucumber (Chinese Long) v3	cucwgoB642
Bhi03G000757	Cucumber (Chinese Long) v2	cuwgoB189
Bhi03G000757	Cucumber (Chinese Long) v2	cuwgoB621
Bhi03G000757	Bottle gourd (USVL1VR-Ls)	lsiwgoB180
Bhi03G000757	Bottle gourd (USVL1VR-Ls)	lsiwgoB613
Bhi03G000757	Melon (DHL92) v3.6.1	medwgoB354
Bhi03G000757	Melon (DHL92) v3.6.1	medwgoB643
Bhi03G000757	Melon (DHL92) v3.5.1	mewgoB354
Bhi03G000757	Melon (DHL92) v3.5.1	mewgoB636
Bhi03G000757	Watermelon (Charleston Gray)	wcgwgoB223
Bhi03G000757	Watermelon (Charleston Gray)	wcgwgoB640
Bhi03G000757	Watermelon (97103) v2	wgowmbB397
Bhi03G000757	Watermelon (97103) v2	wgowmbB444
Bhi03G000757	Watermelon (97103) v1	wgowmB414
Bhi03G000757	Watermelon (97103) v1	wgowmB426
Bhi03G000757	Silver-seed gourd	carwgoB0003
Bhi03G000757	Silver-seed gourd	carwgoB0233
Bhi03G000757	Silver-seed gourd	carwgoB0464
Bhi03G000757	Silver-seed gourd	carwgoB0491