Bhi03M000608 (mRNA) Wax gourd

Overview
NameBhi03M000608
TypemRNA
OrganismBenincasa hispida (Wax gourd)
DescriptionRibulose bisphosphate carboxylase large chain
Locationchr3 : 15133412 .. 15133816 (+)
Sequence length405
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTACTTCCATTGTCGATAATGTATTTGGATTCAAGGCTCTACATGCTCTACGTCTGGAGGATTTGCGAATCCCTATTGCTTATATTAAAACTTTCCAAGGCCCGCCTCATGGTATCCAGGTTGAAAGAGATAAATTGAACAAGTATGGTCGCCCTCTATTGGGATGTACTATTAAACCAAAATTGGGATTATTCGCTAAGAATTATGGTAGAGTAGTTTATGAATGTCTATGCGATGGACTTGATTGTACCAAAGATGATGAAAACGTGAATTCCCAACTATTTATGCGTTGGAGAGACCGTTTCCTATTTTGTGCGGAAGCTATTTATAAATCACAGGCTGAAACAGGTGAAATCAAGGGGCATTACTTGAATCCTACTCAGATACATGTGAAGAAATGA

mRNA sequence

ATGTTTACTTCCATTGTCGATAATGTATTTGGATTCAAGGCTCTACATGCTCTACGTCTGGAGGATTTGCGAATCCCTATTGCTTATATTAAAACTTTCCAAGGCCCGCCTCATGGTATCCAGGTTGAAAGAGATAAATTGAACAAGTATGGTCGCCCTCTATTGGGATGTACTATTAAACCAAAATTGGGATTATTCGCTAAGAATTATGGTAGAGTAGTTTATGAATGTCTATGCGATGGACTTGATTGTACCAAAGATGATGAAAACGTGAATTCCCAACTATTTATGCGTTGGAGAGACCGTTTCCTATTTTGTGCGGAAGCTATTTATAAATCACAGGCTGAAACAGGTGAAATCAAGGGGCATTACTTGAATCCTACTCAGATACATGTGAAGAAATGA

Coding sequence (CDS)

ATGTTTACTTCCATTGTCGATAATGTATTTGGATTCAAGGCTCTACATGCTCTACGTCTGGAGGATTTGCGAATCCCTATTGCTTATATTAAAACTTTCCAAGGCCCGCCTCATGGTATCCAGGTTGAAAGAGATAAATTGAACAAGTATGGTCGCCCTCTATTGGGATGTACTATTAAACCAAAATTGGGATTATTCGCTAAGAATTATGGTAGAGTAGTTTATGAATGTCTATGCGATGGACTTGATTGTACCAAAGATGATGAAAACGTGAATTCCCAACTATTTATGCGTTGGAGAGACCGTTTCCTATTTTGTGCGGAAGCTATTTATAAATCACAGGCTGAAACAGGTGAAATCAAGGGGCATTACTTGAATCCTACTCAGATACATGTGAAGAAATGA

Protein sequence

MFTSIVDNVFGFKALHALRLEDLRIPIAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLFAKNYGRVVYECLCDGLDCTKDDENVNSQLFMRWRDRFLFCAEAIYKSQAETGEIKGHYLNPTQIHVKK
Homology
[Close]
BLAST of Bhi03M000608 vs. Swiss-Prot
Match: sp|Q31809|RBL_ASPLA (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Asperula laevigata OX=29781 GN=rbcL PE=3 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.2e-65
Identity = 117/128 (91.41%), Postives = 119/128 (92.97%), Query Frame = 0 

Query: 1   MFTSIVDNVFGFKALHALRLEDLRIPIAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIK 60
           MFTSIV NVFGFKAL ALRLEDLRIP+AY+KTFQGPPHGIQVERDKLNKYGRPLLGCTIK
Sbjct: 116 MFTSIVGNVFGFKALRALRLEDLRIPVAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIK 175

Query: 61  PKLGLFAKNYGRVVYECLCDGLDCTKDDENVNSQLFMRWRDRFLFCAEAIYKSQAETGEI 120
           PKLGL AKNYGR VYECL  GLD TKDDENVNSQ FMRWRDRFLFCAEAIYKSQAETGEI
Sbjct: 176 PKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEI 235

Query: 121 KGHYLNPT 129
           KGHYLN T
Sbjct: 236 KGHYLNAT 243

[Close]
BLAST of Bhi03M000608 vs. Swiss-Prot
Match: sp|P28395|RBL_CRAMA (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Crassula marnierana OX=45093 GN=rbcL PE=3 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.2e-65
Identity = 117/128 (91.41%), Postives = 119/128 (92.97%), Query Frame = 0 

Query: 1   MFTSIVDNVFGFKALHALRLEDLRIPIAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIK 60
           MFTSIV NVFGFKAL ALRLEDLRIP+AY+KTFQGPPHGIQVERDKLNKYGRPLLGCTIK
Sbjct: 106 MFTSIVGNVFGFKALRALRLEDLRIPVAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIK 165

Query: 61  PKLGLFAKNYGRVVYECLCDGLDCTKDDENVNSQLFMRWRDRFLFCAEAIYKSQAETGEI 120
           PKLGL AKNYGR VYECL  GLD TKDDENVNSQ FMRWRDRFLFCAEAIYKSQAETGEI
Sbjct: 166 PKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEI 225

Query: 121 KGHYLNPT 129
           KGHYLN T
Sbjct: 226 KGHYLNAT 233

[Close]
BLAST of Bhi03M000608 vs. Swiss-Prot
Match: sp|Q31946|RBL_CRUAN (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Crucianella angustifolia OX=29784 GN=rbcL PE=3 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.2e-65
Identity = 117/128 (91.41%), Postives = 119/128 (92.97%), Query Frame = 0 

Query: 1   MFTSIVDNVFGFKALHALRLEDLRIPIAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIK 60
           MFTSIV NVFGFKAL ALRLEDLRIP+AY+KTFQGPPHGIQVERDKLNKYGRPLLGCTIK
Sbjct: 116 MFTSIVGNVFGFKALRALRLEDLRIPVAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIK 175

Query: 61  PKLGLFAKNYGRVVYECLCDGLDCTKDDENVNSQLFMRWRDRFLFCAEAIYKSQAETGEI 120
           PKLGL AKNYGR VYECL  GLD TKDDENVNSQ FMRWRDRFLFCAEAIYKSQAETGEI
Sbjct: 176 PKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEI 235

Query: 121 KGHYLNPT 129
           KGHYLN T
Sbjct: 236 KGHYLNAT 243

[Close]
BLAST of Bhi03M000608 vs. Swiss-Prot
Match: sp|Q31992|RBL_CRUGL (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Cruciata glabra OX=29785 GN=rbcL PE=3 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.2e-65
Identity = 117/128 (91.41%), Postives = 119/128 (92.97%), Query Frame = 0 

Query: 1   MFTSIVDNVFGFKALHALRLEDLRIPIAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIK 60
           MFTSIV NVFGFKAL ALRLEDLRIP+AY+KTFQGPPHGIQVERDKLNKYGRPLLGCTIK
Sbjct: 116 MFTSIVGNVFGFKALRALRLEDLRIPVAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIK 175

Query: 61  PKLGLFAKNYGRVVYECLCDGLDCTKDDENVNSQLFMRWRDRFLFCAEAIYKSQAETGEI 120
           PKLGL AKNYGR VYECL  GLD TKDDENVNSQ FMRWRDRFLFCAEAIYKSQAETGEI
Sbjct: 176 PKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEI 235

Query: 121 KGHYLNPT 129
           KGHYLN T
Sbjct: 236 KGHYLNAT 243

[Close]
BLAST of Bhi03M000608 vs. Swiss-Prot
Match: sp|Q32255|RBL_GALAL (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Galium album OX=29787 GN=rbcL PE=3 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.2e-65
Identity = 117/128 (91.41%), Postives = 119/128 (92.97%), Query Frame = 0 

Query: 1   MFTSIVDNVFGFKALHALRLEDLRIPIAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIK 60
           MFTSIV NVFGFKAL ALRLEDLRIP+AY+KTFQGPPHGIQVERDKLNKYGRPLLGCTIK
Sbjct: 116 MFTSIVGNVFGFKALRALRLEDLRIPVAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIK 175

Query: 61  PKLGLFAKNYGRVVYECLCDGLDCTKDDENVNSQLFMRWRDRFLFCAEAIYKSQAETGEI 120
           PKLGL AKNYGR VYECL  GLD TKDDENVNSQ FMRWRDRFLFCAEAIYKSQAETGEI
Sbjct: 176 PKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEI 235

Query: 121 KGHYLNPT 129
           KGHYLN T
Sbjct: 236 KGHYLNAT 243

[Close]
BLAST of Bhi03M000608 vs. TAIR10
Match: ATCG00490.1 (ribulose-bisphosphate carboxylases)

HSP 1 Score: 245.7 bits (626), Expect = 1.6e-65
Identity = 117/128 (91.41%), Postives = 117/128 (91.41%), Query Frame = 0 

Query: 1   MFTSIVDNVFGFKALHALRLEDLRIPIAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIK 60
           MFTSIV NVFGFKAL ALRLEDLRIP AY KTFQGPPHGIQVERDKLNKYGRPLLGCTIK
Sbjct: 116 MFTSIVGNVFGFKALAALRLEDLRIPPAYTKTFQGPPHGIQVERDKLNKYGRPLLGCTIK 175

Query: 61  PKLGLFAKNYGRVVYECLCDGLDCTKDDENVNSQLFMRWRDRFLFCAEAIYKSQAETGEI 120
           PKLGL AKNYGR VYECL  GLD TKDDENVNSQ FMRWRDRFLFCAEAIYKSQAETGEI
Sbjct: 176 PKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEI 235

Query: 121 KGHYLNPT 129
           KGHYLN T
Sbjct: 236 KGHYLNAT 243

[Close]
BLAST of Bhi03M000608 vs. TAIR10
Match: AT2G07732.1 (Ribulose bisphosphate carboxylase large chain, catalytic domain)

HSP 1 Score: 114.8 bits (286), Expect = 4.2e-26
Identity = 52/62 (83.87%), Postives = 54/62 (87.10%), Query Frame = 0 

Query: 67  AKNYGRVVYECLCDGLDCTKDDENVNSQLFMRWRDRFLFCAEAIYKSQAETGEIKGHYLN 126
           AKNYGR VYECL  GL  TKDDENVNSQ FMRWRDRFLFCAEA+YK+QAETG IKGHYLN
Sbjct: 14  AKNYGRAVYECLRGGLYFTKDDENVNSQPFMRWRDRFLFCAEAVYKAQAETGGIKGHYLN 73

Query: 127 PT 129
            T
Sbjct: 74  AT 75

[Close]
BLAST of Bhi03M000608 vs. TAIR10
Match: ATMG00280.1 (Ribulose bisphosphate carboxylase large chain, catalytic domain)

HSP 1 Score: 114.8 bits (286), Expect = 4.2e-26
Identity = 52/62 (83.87%), Postives = 54/62 (87.10%), Query Frame = 0 

Query: 67  AKNYGRVVYECLCDGLDCTKDDENVNSQLFMRWRDRFLFCAEAIYKSQAETGEIKGHYLN 126
           AKNYGR VYECL  GL  TKDDENVNSQ FMRWRDRFLFCAEA+YK+QAETG IKGHYLN
Sbjct: 14  AKNYGRAVYECLRGGLYFTKDDENVNSQPFMRWRDRFLFCAEAVYKAQAETGGIKGHYLN 73

Query: 127 PT 129
            T
Sbjct: 74  AT 75

[Close]
BLAST of Bhi03M000608 vs. TrEMBL
Match: tr|G0WYL0|G0WYL0_9ASTR (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Gamochaeta pensylvanica OX=125697 GN=rbcL PE=3 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 8.0e-64
Identity = 118/128 (92.19%), Postives = 119/128 (92.97%), Query Frame = 0 

Query: 1   MFTSIVDNVFGFKALHALRLEDLRIPIAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIK 60
           MFTSIV NVFGFKAL ALRLEDLRIP AY+KTFQGPPHGIQVERDKLNKYGRPLLGCTIK
Sbjct: 101 MFTSIVGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIK 160

Query: 61  PKLGLFAKNYGRVVYECLCDGLDCTKDDENVNSQLFMRWRDRFLFCAEAIYKSQAETGEI 120
           PKLGLFAKNYGR VYECL  GLD TKDDENVNSQ FMRWRDRFLFCAEAIYKSQAETGEI
Sbjct: 161 PKLGLFAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEI 220

Query: 121 KGHYLNPT 129
           KGHYLN T
Sbjct: 221 KGHYLNAT 228

[Close]
BLAST of Bhi03M000608 vs. TrEMBL
Match: tr|W5XN02|W5XN02_9ASTE (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Heliotropium erosum OX=244098 GN=rbcL PE=3 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.0e-63
Identity = 118/131 (90.08%), Postives = 120/131 (91.60%), Query Frame = 0 

Query: 1   MFTSIVDNVFGFKALHALRLEDLRIPIAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIK 60
           MFTSIV NVFGFKAL ALRLEDLRIP+AY+KTFQGPPHGIQVERDKLNKYGRPLLGCTIK
Sbjct: 110 MFTSIVGNVFGFKALRALRLEDLRIPVAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIK 169

Query: 61  PKLGLFAKNYGRVVYECLCDGLDCTKDDENVNSQLFMRWRDRFLFCAEAIYKSQAETGEI 120
           PKLGL AKNYGR VYECL  GLD TKDDENVNSQ FMRWRDRFLFCAEAIYKSQAETGEI
Sbjct: 170 PKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEI 229

Query: 121 KGHYLNPTQIH 132
           KGHYLN T  H
Sbjct: 230 KGHYLNATAGH 240

[Close]
BLAST of Bhi03M000608 vs. TrEMBL
Match: tr|A0A1B2YKT6|A0A1B2YKT6_9ASTE (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Heliotropium crispum OX=1891217 GN=rbcL PE=3 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.0e-63
Identity = 118/131 (90.08%), Postives = 120/131 (91.60%), Query Frame = 0 

Query: 1   MFTSIVDNVFGFKALHALRLEDLRIPIAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIK 60
           MFTSIV NVFGFKAL ALRLEDLRIP+AY+KTFQGPPHGIQVERDKLNKYGRPLLGCTIK
Sbjct: 9   MFTSIVGNVFGFKALRALRLEDLRIPVAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIK 68

Query: 61  PKLGLFAKNYGRVVYECLCDGLDCTKDDENVNSQLFMRWRDRFLFCAEAIYKSQAETGEI 120
           PKLGL AKNYGR VYECL  GLD TKDDENVNSQ FMRWRDRFLFCAEAIYKSQAETGEI
Sbjct: 69  PKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEI 128

Query: 121 KGHYLNPTQIH 132
           KGHYLN T  H
Sbjct: 129 KGHYLNATAGH 139

[Close]
BLAST of Bhi03M000608 vs. TrEMBL
Match: tr|A0A288QNM3|A0A288QNM3_9ASTE (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Heliotropium bacciferum OX=244092 PE=3 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.0e-63
Identity = 118/131 (90.08%), Postives = 120/131 (91.60%), Query Frame = 0 

Query: 1   MFTSIVDNVFGFKALHALRLEDLRIPIAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIK 60
           MFTSIV NVFGFKAL ALRLEDLRIP+AY+KTFQGPPHGIQVERDKLNKYGRPLLGCTIK
Sbjct: 51  MFTSIVGNVFGFKALRALRLEDLRIPVAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIK 110

Query: 61  PKLGLFAKNYGRVVYECLCDGLDCTKDDENVNSQLFMRWRDRFLFCAEAIYKSQAETGEI 120
           PKLGL AKNYGR VYECL  GLD TKDDENVNSQ FMRWRDRFLFCAEAIYKSQAETGEI
Sbjct: 111 PKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEI 170

Query: 121 KGHYLNPTQIH 132
           KGHYLN T  H
Sbjct: 171 KGHYLNATAGH 181

[Close]
BLAST of Bhi03M000608 vs. TrEMBL
Match: tr|A0A288Q0C1|A0A288Q0C1_9ASTE (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Heliotropium bacciferum OX=244092 PE=3 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.0e-63
Identity = 118/131 (90.08%), Postives = 120/131 (91.60%), Query Frame = 0 

Query: 1   MFTSIVDNVFGFKALHALRLEDLRIPIAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIK 60
           MFTSIV NVFGFKAL ALRLEDLRIP+AY+KTFQGPPHGIQVERDKLNKYGRPLLGCTIK
Sbjct: 51  MFTSIVGNVFGFKALRALRLEDLRIPVAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIK 110

Query: 61  PKLGLFAKNYGRVVYECLCDGLDCTKDDENVNSQLFMRWRDRFLFCAEAIYKSQAETGEI 120
           PKLGL AKNYGR VYECL  GLD TKDDENVNSQ FMRWRDRFLFCAEAIYKSQAETGEI
Sbjct: 111 PKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEI 170

Query: 121 KGHYLNPTQIH 132
           KGHYLN T  H
Sbjct: 171 KGHYLNATAGH 181

[Close]
BLAST of Bhi03M000608 vs. NCBI nr
Match: AEK34134.1 (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloroplast) [Gamochaeta pensylvanica])

HSP 1 Score: 251.9 bits (642), Expect = 1.2e-63
Identity = 118/128 (92.19%), Postives = 119/128 (92.97%), Query Frame = 0 

Query: 1   MFTSIVDNVFGFKALHALRLEDLRIPIAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIK 60
           MFTSIV NVFGFKAL ALRLEDLRIP AY+KTFQGPPHGIQVERDKLNKYGRPLLGCTIK
Sbjct: 101 MFTSIVGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIK 160

Query: 61  PKLGLFAKNYGRVVYECLCDGLDCTKDDENVNSQLFMRWRDRFLFCAEAIYKSQAETGEI 120
           PKLGLFAKNYGR VYECL  GLD TKDDENVNSQ FMRWRDRFLFCAEAIYKSQAETGEI
Sbjct: 161 PKLGLFAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEI 220

Query: 121 KGHYLNPT 129
           KGHYLN T
Sbjct: 221 KGHYLNAT 228

[Close]
BLAST of Bhi03M000608 vs. NCBI nr
Match: AOD75003.1 (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloroplast) [Heliotropium crispum])

HSP 1 Score: 251.5 bits (641), Expect = 1.6e-63
Identity = 118/131 (90.08%), Postives = 120/131 (91.60%), Query Frame = 0 

Query: 1   MFTSIVDNVFGFKALHALRLEDLRIPIAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIK 60
           MFTSIV NVFGFKAL ALRLEDLRIP+AY+KTFQGPPHGIQVERDKLNKYGRPLLGCTIK
Sbjct: 9   MFTSIVGNVFGFKALRALRLEDLRIPVAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIK 68

Query: 61  PKLGLFAKNYGRVVYECLCDGLDCTKDDENVNSQLFMRWRDRFLFCAEAIYKSQAETGEI 120
           PKLGL AKNYGR VYECL  GLD TKDDENVNSQ FMRWRDRFLFCAEAIYKSQAETGEI
Sbjct: 69  PKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEI 128

Query: 121 KGHYLNPTQIH 132
           KGHYLN T  H
Sbjct: 129 KGHYLNATAGH 139

[Close]
BLAST of Bhi03M000608 vs. NCBI nr
Match: AOS58437.1 (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloroplast) [Heliotropium bacciferum])

HSP 1 Score: 251.5 bits (641), Expect = 1.6e-63
Identity = 118/131 (90.08%), Postives = 120/131 (91.60%), Query Frame = 0 

Query: 1   MFTSIVDNVFGFKALHALRLEDLRIPIAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIK 60
           MFTSIV NVFGFKAL ALRLEDLRIP+AY+KTFQGPPHGIQVERDKLNKYGRPLLGCTIK
Sbjct: 51  MFTSIVGNVFGFKALRALRLEDLRIPVAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIK 110

Query: 61  PKLGLFAKNYGRVVYECLCDGLDCTKDDENVNSQLFMRWRDRFLFCAEAIYKSQAETGEI 120
           PKLGL AKNYGR VYECL  GLD TKDDENVNSQ FMRWRDRFLFCAEAIYKSQAETGEI
Sbjct: 111 PKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEI 170

Query: 121 KGHYLNPTQIH 132
           KGHYLN T  H
Sbjct: 171 KGHYLNATAGH 181

[Close]
BLAST of Bhi03M000608 vs. NCBI nr
Match: AOS58438.1 (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloroplast) [Heliotropium bacciferum])

HSP 1 Score: 251.5 bits (641), Expect = 1.6e-63
Identity = 118/131 (90.08%), Postives = 120/131 (91.60%), Query Frame = 0 

Query: 1   MFTSIVDNVFGFKALHALRLEDLRIPIAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIK 60
           MFTSIV NVFGFKAL ALRLEDLRIP+AY+KTFQGPPHGIQVERDKLNKYGRPLLGCTIK
Sbjct: 51  MFTSIVGNVFGFKALRALRLEDLRIPVAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIK 110

Query: 61  PKLGLFAKNYGRVVYECLCDGLDCTKDDENVNSQLFMRWRDRFLFCAEAIYKSQAETGEI 120
           PKLGL AKNYGR VYECL  GLD TKDDENVNSQ FMRWRDRFLFCAEAIYKSQAETGEI
Sbjct: 111 PKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEI 170

Query: 121 KGHYLNPTQIH 132
           KGHYLN T  H
Sbjct: 171 KGHYLNATAGH 181

[Close]
BLAST of Bhi03M000608 vs. NCBI nr
Match: AHI17658.1 (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloroplast) [Heliotropium erosum])

HSP 1 Score: 251.5 bits (641), Expect = 1.6e-63
Identity = 118/131 (90.08%), Postives = 120/131 (91.60%), Query Frame = 0 

Query: 1   MFTSIVDNVFGFKALHALRLEDLRIPIAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIK 60
           MFTSIV NVFGFKAL ALRLEDLRIP+AY+KTFQGPPHGIQVERDKLNKYGRPLLGCTIK
Sbjct: 110 MFTSIVGNVFGFKALRALRLEDLRIPVAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIK 169

Query: 61  PKLGLFAKNYGRVVYECLCDGLDCTKDDENVNSQLFMRWRDRFLFCAEAIYKSQAETGEI 120
           PKLGL AKNYGR VYECL  GLD TKDDENVNSQ FMRWRDRFLFCAEAIYKSQAETGEI
Sbjct: 170 PKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEI 229

Query: 121 KGHYLNPTQIH 132
           KGHYLN T  H
Sbjct: 230 KGHYLNATAGH 240

The following BLAST results are available for this feature:
BLAST of Bhi03M000608 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q31809|RBL_ASPLA1.2e-6591.41Ribulose bisphosphate carboxylase large chain (Fragment) OS=Asperula laevigata O... [more]
sp|P28395|RBL_CRAMA1.2e-6591.41Ribulose bisphosphate carboxylase large chain (Fragment) OS=Crassula marnierana ... [more]
sp|Q31946|RBL_CRUAN1.2e-6591.41Ribulose bisphosphate carboxylase large chain (Fragment) OS=Crucianella angustif... [more]
sp|Q31992|RBL_CRUGL1.2e-6591.41Ribulose bisphosphate carboxylase large chain (Fragment) OS=Cruciata glabra OX=2... [more]
sp|Q32255|RBL_GALAL1.2e-6591.41Ribulose bisphosphate carboxylase large chain (Fragment) OS=Galium album OX=2978... [more]
BLAST of Bhi03M000608 vs. TAIR10
Match NameE-valueIdentityDescription
ATCG00490.11.6e-6591.41ribulose-bisphosphate carboxylases[more]
AT2G07732.14.2e-2683.87Ribulose bisphosphate carboxylase large chain, catalytic domain[more]
ATMG00280.14.2e-2683.87Ribulose bisphosphate carboxylase large chain, catalytic domain[more]
BLAST of Bhi03M000608 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|G0WYL0|G0WYL0_9ASTR8.0e-6492.19Ribulose bisphosphate carboxylase large chain (Fragment) OS=Gamochaeta pensylvan... [more]
tr|W5XN02|W5XN02_9ASTE1.0e-6390.08Ribulose bisphosphate carboxylase large chain (Fragment) OS=Heliotropium erosum ... [more]
tr|A0A1B2YKT6|A0A1B2YKT6_9ASTE1.0e-6390.08Ribulose bisphosphate carboxylase large chain (Fragment) OS=Heliotropium crispum... [more]
tr|A0A288QNM3|A0A288QNM3_9ASTE1.0e-6390.08Ribulose bisphosphate carboxylase large chain (Fragment) OS=Heliotropium baccife... [more]
tr|A0A288Q0C1|A0A288Q0C1_9ASTE1.0e-6390.08Ribulose bisphosphate carboxylase large chain (Fragment) OS=Heliotropium baccife... [more]
BLAST of Bhi03M000608 vs. NCBI nr
Match NameE-valueIdentityDescription
AEK34134.11.2e-6392.19ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloropl... [more]
AOD75003.11.6e-6390.08ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloropl... [more]
AOS58437.11.6e-6390.08ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloropl... [more]
AOS58438.11.6e-6390.08ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloropl... [more]
AHI17658.11.6e-6390.08ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (chloropl... [more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0000287magnesium ion binding
GO:0016984ribulose-bisphosphate carboxylase activity
Vocabulary: Biological Process
TermDefinition
GO:0015977carbon fixation
Vocabulary: INTERPRO
TermDefinition
IPR036422RuBisCO_lsu_N_sf
IPR036376RuBisCO_lsu_C_sf
IPR000685RuBisCO_lsu_C
IPR017443RuBisCO_lsu_fd_N
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015977 carbon fixation
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009853 photorespiration
biological_process GO:0019253 reductive pentose-phosphate cycle
cellular_component GO:0009507 chloroplast
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0016984 ribulose-bisphosphate carboxylase activity
molecular_function GO:0004497 monooxygenase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Bhi03G000608Bhi03G000608gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi03M000608.exon1Bhi03M000608.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Bhi03M000608cds.Bhi03M000608CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Bhi03M000608Bhi03M000608-proteinpolypeptide


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017443Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminalPFAMPF02788RuBisCO_large_Ncoord: 1..29
e-value: 3.5E-5
score: 23.8
IPR000685Ribulose bisphosphate carboxylase, large subunit, C-terminalPFAMPF00016RuBisCO_largecoord: 39..129
e-value: 3.6E-36
score: 124.8
IPR036376Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamilyGENE3DG3DSA:3.20.20.110coord: 34..132
e-value: 6.3E-38
score: 132.3
IPR036376Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamilySUPERFAMILYSSF51649RuBisCo, C-terminal domaincoord: 33..128
IPR036422RuBisCO large subunit, N-terminal domain superfamilyGENE3DG3DSA:3.30.70.150coord: 1..33
e-value: 3.0E-8
score: 35.5
IPR036422RuBisCO large subunit, N-terminal domain superfamilySUPERFAMILYSSF54966RuBisCO, large subunit, small (N-terminal) domaincoord: 1..34
NoneNo IPR availablePANTHERPTHR42704FAMILY NOT NAMEDcoord: 1..128
NoneNo IPR availablePANTHERPTHR42704:SF2RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAINcoord: 1..128