Bhi02M000610 (mRNA) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi02M000610
Type	mRNA
Organism	Benincasa hispida (Wax gourd)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr2 : 16290236 .. 16290820 (-)
Sequence length	552

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

TATATTGACAGTGGAGCCTCAACACATGTAACCAACAGCCCAAACTTCTTTCAATCCTCCTCCAGCTACACAAGTAATGACAGAGTTGTTGTTGGTAATGGTACTCCTCTTAGCATATCTCAGTCAGGACACTCAAATCTACATACTAAGAATGGCATTCTGTCCCTATTAAATATACTTTATGTACCTGAAATCATAAAAAATTTAGTCAGTGTATCCAAGTTGACAAATGATAATAATGTTGTGGTTGAATTTCATGCTGCTTTTTGTGTGGTTAAGGACAAGGACTCAGGGGTGGCACTTCTGATCGAACGACTTAAAGATGGACTCTACCTTTTGGACAATGTCAACCAGCTGATAAATAAAGCACCCTCCACATCAGAACTCTCAGTTGCTCATTTGACAAATTGGTCCAACCAGTTTTCCTCACACGCTGCTCTTGCAACCAGTACCACCATCTCCAAACTACTTCTCCATAGGCGATTAGGCCATCCATCCCCTGAAATTTTGTCTACTTATTCTGTGTTAATCAAATATAACCAATCCACTAAGCTACCAAGGGGACCTTATGAACTTGTGGCTTGA

mRNA sequence

TATATTGACAGTGGAGCCTCAACACATGTAACCAACAGCCCAAACTTCTTTCAATCCTCCTCCAGCTACACAAGTAATGACAGAGTTGTTGTTGGTAATGGTACTCCTCTTAGCATATCTCAGTCAGGACACTCAAATCTACATACTAAGAATGGCATTCTGTCCCTATTAAATATACTTTATGTACCTGAAATCATAAAAAATTTAGTCAGTGTATCCAAGTTGACAAATGATAATAATGTTGTGGACAAGGACTCAGGGGTGGCACTTCTGATCGAACGACTTAAAGATGGACTCTACCTTTTGGACAATGTCAACCAGCTGATAAATAAAGCACCCTCCACATCAGAACTCTCAGTTGCTCATTTGACAAATTGGTCCAACCAGTTTTCCTCACACGCTGCTCTTGCAACCAGTACCACCATCTCCAAACTACTTCTCCATAGGCGATTAGGCCATCCATCCCCTGAAATTTTGTCTACTTATTCTGTGTTAATCAAATATAACCAATCCACTAAGCTACCAAGGGGACCTTATGAACTTGTGGCTTGA

Coding sequence (CDS)

TATATTGACAGTGGAGCCTCAACACATGTAACCAACAGCCCAAACTTCTTTCAATCCTCCTCCAGCTACACAAGTAATGACAGAGTTGTTGTTGGTAATGGTACTCCTCTTAGCATATCTCAGTCAGGACACTCAAATCTACATACTAAGAATGGCATTCTGTCCCTATTAAATATACTTTATGTACCTGAAATCATAAAAAATTTAGTCAGTGTATCCAAGTTGACAAATGATAATAATGTTGTGGACAAGGACTCAGGGGTGGCACTTCTGATCGAACGACTTAAAGATGGACTCTACCTTTTGGACAATGTCAACCAGCTGATAAATAAAGCACCCTCCACATCAGAACTCTCAGTTGCTCATTTGACAAATTGGTCCAACCAGTTTTCCTCACACGCTGCTCTTGCAACCAGTACCACCATCTCCAAACTACTTCTCCATAGGCGATTAGGCCATCCATCCCCTGAAATTTTGTCTACTTATTCTGTGTTAATCAAATATAACCAATCCACTAAGCTACCAAGGGGACCTTATGAACTTGTGGCTTGA

Protein sequence

YIDSGASTHVTNSPNFFQSSSSYTSNDRVVVGNGTPLSISQSGHSNLHTKNGILSLLNILYVPEIIKNLVSVSKLTNDNNVVDKDSGVALLIERLKDGLYLLDNVNQLINKAPSTSELSVAHLTNWSNQFSSHAALATSTTISKLLLHRRLGHPSPEILSTYSVLIKYNQSTKLPRGPYELVA

Homology

[Close]

BLAST of Bhi02M000610 vs. Swiss-Prot
Match: sp|Q94HW2|POLR1_ARATH (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.3e-14
Identity = 67/185 (36.22%), Postives = 96/185 (51.89%), Query Frame = 0


Query: 2   IDSGASTHVTNSPNFFQSSSSYTSNDRVVVGNGTPLSISQSGHSNLHTKNGILSLLNILY 61
           +DSGA+ H+T+  N       YT  D V+V +G+ + IS +G ++L TK+  L+L NILY
Sbjct: 333 LDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLNLHNILY 392

Query: 62  VPEIIKNLVSVSKLTNDN-----------NVVDKDSGVALLIERLKDGLYLLDNVNQLIN 121
           VP I KNL+SV +L N N            V D ++GV LL  + KD LY          
Sbjct: 393 VPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELY---------- 452

Query: 122 KAPSTSELSVAHLTNWSNQFSSHAALATSTTISKLLLHRRLGHPSPEILSTYSVLIKYNQ 176
           + P  S   V       + F+S ++ AT ++      H RLGHP+P IL+  SV+  Y+ 
Sbjct: 453 EWPIASSQPV-------SLFASPSSKATHSS-----WHARLGHPAPSILN--SVISNYSL 493

[Close]

BLAST of Bhi02M000610 vs. Swiss-Prot
Match: sp|Q9ZT94|POLR2_ARATH (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.7e-11
Identity = 57/171 (33.33%), Postives = 86/171 (50.29%), Query Frame = 0


Query: 2   IDSGASTHVTNSPNFFQSSSSYTSNDRVVVGNGTPLSISQSGHSNLHTKNGILSLLNILY 61
           +DSGA+ H+T+  N       YT  D V++ +G+ + I+ +G ++L T +  L L  +LY
Sbjct: 312 LDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLY 371

Query: 62  VPEIIKNLVSVSKLTNDN-----------NVVDKDSGVALLIERLKDGLYLLDNVNQLIN 121
           VP I KNL+SV +L N N            V D ++GV LL  + KD LY          
Sbjct: 372 VPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELY---------- 431

Query: 122 KAPSTSELSVAHLTNWSNQFSSHAALATSTTISKLLLHRRLGHPSPEILST 162
           + P  S  +V       + F+S  + AT ++      H RLGHPS  IL++
Sbjct: 432 EWPIASSQAV-------SMFASPCSKATHSS-----WHSRLGHPSLAILNS 460

[Close]

BLAST of Bhi02M000610 vs. TrEMBL
Match: tr|A0A2K3LJ49|A0A2K3LJ49_TRIPR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Trifolium pratense OX=57577 GN=L195_g034552 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 8.5e-16
Identity = 70/170 (41.18%), Postives = 90/170 (52.94%), Query Frame = 0


Query: 1   YIDSGASTHVTNSPNFFQSSSSYTSNDRVVVGNGTPLSISQSGHSNLHTKNGILSLLNIL 60
           Y DSGAS HVT+  + FQ  +  +  + ++VGNG  L I  SG S L  KN  L+L ++L
Sbjct: 315 YFDSGASNHVTHQADKFQELTENSGKNSLIVGNGAKLKIDASGSSKL--KN--LNLHDVL 374

Query: 61  YVPEIIKNLVSVSKLTNDNNVV-----------DKDSGVALLIERLKDGLYLLDNVNQLI 120
           YVP+I KNL+SVSKLT+DNN++           DK +G  LL   LKDGLY L N +   
Sbjct: 375 YVPQITKNLLSVSKLTSDNNIIVEFDNDCCFVKDKLTGKVLLRGILKDGLYQLSNGSSQT 434

Query: 121 NKAPSTSELSVAHLTNWSNQFSSHAALATSTTISKLLLHRRLGHPSPEIL 160
           NK P    LSV    +W                     HR+LGHPS  +L
Sbjct: 435 NKDPCV-YLSVKE--SW---------------------HRKLGHPSNNVL 456

[Close]

BLAST of Bhi02M000610 vs. TrEMBL
Match: tr|A0A2K3NEN7|A0A2K3NEN7_TRIPR (Copia-like polyprotein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g024786 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.4e-15
Identity = 68/170 (40.00%), Postives = 91/170 (53.53%), Query Frame = 0


Query: 1   YIDSGASTHVTNSPNFFQSSSSYTSNDRVVVGNGTPLSISQSGHSNLHTKNGILSLLNIL 60
           Y DSGAS HVT+  + FQ  + +   + ++VGNG  L I  SG + L+T    L+L ++L
Sbjct: 313 YFDSGASNHVTHQTDKFQGFNEHNGKNSLMVGNGEKLKIVASGSTKLNT----LNLHDVL 372

Query: 61  YVPEIIKNLVSVSKLTNDNN-----------VVDKDSGVALLIERLKDGLYLLDNVNQLI 120
           YVP+I KNL+SVSKLT DNN           V DK +G  LL  RLKDGLY L +V+   
Sbjct: 373 YVPQITKNLLSVSKLTADNNIFVEFDANCCSVKDKLTGQTLLKGRLKDGLYQLSDVSPQS 432

Query: 121 NKAPSTSELSVAHLTNWSNQFSSHAALATSTTISKLLLHRRLGHPSPEIL 160
           NK P    +SV    +W                     HR+LGHP+ ++L
Sbjct: 433 NKDPCV-YMSVKE--SW---------------------HRKLGHPNNKVL 454

[Close]

BLAST of Bhi02M000610 vs. TrEMBL
Match: tr|A0A2K3NIC3|A0A2K3NIC3_TRIPR (Copia protein (Gag-int-pol protein) (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g026116 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.4e-15
Identity = 68/170 (40.00%), Postives = 93/170 (54.71%), Query Frame = 0


Query: 1   YIDSGASTHVTNSPNFFQSSSSYTSNDRVVVGNGTPLSISQSGHSNLHTKNGILSLLNIL 60
           Y DSGAS HVT+  + FQ  + +   + ++VGNG  L I  SG + L  KN  L+L ++L
Sbjct: 38  YFDSGASNHVTHQTDKFQDLTGHNGKNSLMVGNGEKLKIVASGSTKL--KN--LNLYDVL 97

Query: 61  YVPEIIKNLVSVSKLTNDNNVV-----------DKDSGVALLIERLKDGLYLLDNVNQLI 120
           YVPEI KNL+SVSKLT DNN++           DK +G ALL  +LK+GLY + NV+   
Sbjct: 98  YVPEITKNLLSVSKLTADNNIIVEFDADCCSVKDKLTGKALLKGKLKEGLYQVSNVSSQS 157

Query: 121 NKAPSTSELSVAHLTNWSNQFSSHAALATSTTISKLLLHRRLGHPSPEIL 160
           NK   T  +SV    +W                     HR+LGHP+ ++L
Sbjct: 158 NKDACT-YMSVKE--SW---------------------HRKLGHPNNKVL 179

[Close]

BLAST of Bhi02M000610 vs. TrEMBL
Match: tr|A0A2K3LRE0|A0A2K3LRE0_TRIPR (Glutamate receptor OS=Trifolium pratense OX=57577 GN=L195_g037121 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 3.2e-15
Identity = 66/170 (38.82%), Postives = 90/170 (52.94%), Query Frame = 0


Query: 1   YIDSGASTHVTNSPNFFQSSSSYTSNDRVVVGNGTPLSISQSGHSNLHTKNGILSLLNIL 60
           Y DSGAS HVT+  + F+  + +T  + ++VGNG  L I  SG S ++T N    L N+L
Sbjct: 316 YFDSGASNHVTHQADRFEDLTEHTGKNSLMVGNGEKLKIVASGSSKINTVN----LHNVL 375

Query: 61  YVPEIIKNLVSVSKLTNDNNVV-----------DKDSGVALLIERLKDGLYLLDNVNQLI 120
           YVP+I KNL+SVSKLT+DNN +           DK +G  LL  RLKDGLY L +  Q  
Sbjct: 376 YVPQITKNLLSVSKLTSDNNAIVEFDHDYCYVKDKVTGKVLLKGRLKDGLYQLSDATQ-- 435

Query: 121 NKAPSTSELSVAHLTNWSNQFSSHAALATSTTISKLLLHRRLGHPSPEIL 160
                T++ S  +L+                   K   HR+LGHP+ + L
Sbjct: 436 -----TNKDSCVYLS------------------VKESWHRKLGHPNNKAL 456

[Close]

BLAST of Bhi02M000610 vs. TrEMBL
Match: tr|A0A2K3MUJ9|A0A2K3MUJ9_TRIPR (Putative retrotransposon Ty1-copia subclass protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g017679 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 5.5e-15
Identity = 68/170 (40.00%), Postives = 88/170 (51.76%), Query Frame = 0


Query: 1   YIDSGASTHVTNSPNFFQSSSSYTSNDRVVVGNGTPLSISQSGHSNLHTKNGILSLLNIL 60
           Y DSGAS HVT+     Q  +     + ++VGNG  L I  SG + L+  N    L N+L
Sbjct: 313 YFDSGASNHVTHQSGQLQDLNENNGKNSLLVGNGEKLKILASGSTKLNDVN----LRNVL 372

Query: 61  YVPEIIKNLVSVSKLTNDNN-----------VVDKDSGVALLIERLKDGLYLLDNVNQLI 120
           YVPEI KNL+SVSKLT DNN           V DK +G ALL  RLKDGLY L       
Sbjct: 373 YVPEITKNLLSVSKLTIDNNALVEFDENYCYVKDKLTGKALLKGRLKDGLYQLS-----A 432

Query: 121 NKAPSTSELSVAHLTNWSNQFSSHAALATSTTISKLLLHRRLGHPSPEIL 160
           NK P T++   A+++                   K + HR+LGHP+ ++L
Sbjct: 433 NKEPPTNKDPCAYIS------------------LKEIWHRKLGHPNNKVL 455

[Close]

BLAST of Bhi02M000610 vs. NCBI nr
Match: PNX78574.1 (retrovirus-related Pol polyprotein from transposon TNT 1-94 [Trifolium pratense])

HSP 1 Score: 92.8 bits (229), Expect = 1.3e-15
Identity = 70/170 (41.18%), Postives = 90/170 (52.94%), Query Frame = 0


Query: 1   YIDSGASTHVTNSPNFFQSSSSYTSNDRVVVGNGTPLSISQSGHSNLHTKNGILSLLNIL 60
           Y DSGAS HVT+  + FQ  +  +  + ++VGNG  L I  SG S L  KN  L+L ++L
Sbjct: 315 YFDSGASNHVTHQADKFQELTENSGKNSLIVGNGAKLKIDASGSSKL--KN--LNLHDVL 374

Query: 61  YVPEIIKNLVSVSKLTNDNNVV-----------DKDSGVALLIERLKDGLYLLDNVNQLI 120
           YVP+I KNL+SVSKLT+DNN++           DK +G  LL   LKDGLY L N +   
Sbjct: 375 YVPQITKNLLSVSKLTSDNNIIVEFDNDCCFVKDKLTGKVLLRGILKDGLYQLSNGSSQT 434

Query: 121 NKAPSTSELSVAHLTNWSNQFSSHAALATSTTISKLLLHRRLGHPSPEIL 160
           NK P    LSV    +W                     HR+LGHPS  +L
Sbjct: 435 NKDPCV-YLSVKE--SW---------------------HRKLGHPSNNVL 456

[Close]

BLAST of Bhi02M000610 vs. NCBI nr
Match: PNY01489.1 (copia-like polyprotein, partial [Trifolium pratense])

HSP 1 Score: 92.0 bits (227), Expect = 2.2e-15
Identity = 68/170 (40.00%), Postives = 91/170 (53.53%), Query Frame = 0


Query: 1   YIDSGASTHVTNSPNFFQSSSSYTSNDRVVVGNGTPLSISQSGHSNLHTKNGILSLLNIL 60
           Y DSGAS HVT+  + FQ  + +   + ++VGNG  L I  SG + L+T    L+L ++L
Sbjct: 313 YFDSGASNHVTHQTDKFQGFNEHNGKNSLMVGNGEKLKIVASGSTKLNT----LNLHDVL 372

Query: 61  YVPEIIKNLVSVSKLTNDNN-----------VVDKDSGVALLIERLKDGLYLLDNVNQLI 120
           YVP+I KNL+SVSKLT DNN           V DK +G  LL  RLKDGLY L +V+   
Sbjct: 373 YVPQITKNLLSVSKLTADNNIFVEFDANCCSVKDKLTGQTLLKGRLKDGLYQLSDVSPQS 432

Query: 121 NKAPSTSELSVAHLTNWSNQFSSHAALATSTTISKLLLHRRLGHPSPEIL 160
           NK P    +SV    +W                     HR+LGHP+ ++L
Sbjct: 433 NKDPCV-YMSVKE--SW---------------------HRKLGHPNNKVL 454

[Close]

BLAST of Bhi02M000610 vs. NCBI nr
Match: PNY02796.1 (copia protein (gag-int-pol protein), partial [Trifolium pratense])

HSP 1 Score: 92.0 bits (227), Expect = 2.2e-15
Identity = 68/170 (40.00%), Postives = 93/170 (54.71%), Query Frame = 0


Query: 1   YIDSGASTHVTNSPNFFQSSSSYTSNDRVVVGNGTPLSISQSGHSNLHTKNGILSLLNIL 60
           Y DSGAS HVT+  + FQ  + +   + ++VGNG  L I  SG + L  KN  L+L ++L
Sbjct: 38  YFDSGASNHVTHQTDKFQDLTGHNGKNSLMVGNGEKLKIVASGSTKL--KN--LNLYDVL 97

Query: 61  YVPEIIKNLVSVSKLTNDNNVV-----------DKDSGVALLIERLKDGLYLLDNVNQLI 120
           YVPEI KNL+SVSKLT DNN++           DK +G ALL  +LK+GLY + NV+   
Sbjct: 98  YVPEITKNLLSVSKLTADNNIIVEFDADCCSVKDKLTGKALLKGKLKEGLYQVSNVSSQS 157

Query: 121 NKAPSTSELSVAHLTNWSNQFSSHAALATSTTISKLLLHRRLGHPSPEIL 160
           NK   T  +SV    +W                     HR+LGHP+ ++L
Sbjct: 158 NKDACT-YMSVKE--SW---------------------HRKLGHPNNKVL 179

[Close]

BLAST of Bhi02M000610 vs. NCBI nr
Match: PNX81106.1 (glutamate receptor [Trifolium pratense])

HSP 1 Score: 90.9 bits (224), Expect = 4.9e-15
Identity = 66/170 (38.82%), Postives = 90/170 (52.94%), Query Frame = 0


Query: 1   YIDSGASTHVTNSPNFFQSSSSYTSNDRVVVGNGTPLSISQSGHSNLHTKNGILSLLNIL 60
           Y DSGAS HVT+  + F+  + +T  + ++VGNG  L I  SG S ++T N    L N+L
Sbjct: 316 YFDSGASNHVTHQADRFEDLTEHTGKNSLMVGNGEKLKIVASGSSKINTVN----LHNVL 375

Query: 61  YVPEIIKNLVSVSKLTNDNNVV-----------DKDSGVALLIERLKDGLYLLDNVNQLI 120
           YVP+I KNL+SVSKLT+DNN +           DK +G  LL  RLKDGLY L +  Q  
Sbjct: 376 YVPQITKNLLSVSKLTSDNNAIVEFDHDYCYVKDKVTGKVLLKGRLKDGLYQLSDATQ-- 435

Query: 121 NKAPSTSELSVAHLTNWSNQFSSHAALATSTTISKLLLHRRLGHPSPEIL 160
                T++ S  +L+                   K   HR+LGHP+ + L
Sbjct: 436 -----TNKDSCVYLS------------------VKESWHRKLGHPNNKAL 456

[Close]

BLAST of Bhi02M000610 vs. NCBI nr
Match: XP_022151683.1 (uncharacterized protein LOC111019598 [Momordica charantia])

HSP 1 Score: 90.5 bits (223), Expect = 6.4e-15
Identity = 64/176 (36.36%), Postives = 89/176 (50.57%), Query Frame = 0


Query: 1   YIDSGASTHVTNSPNFFQSSSSYTSNDRVVVGNGTPLSISQSGHSNLHTKNGILSLLNIL 60
           Y DSGA++HVT +PN  +    Y+  + V+V NG  LSIS  G +N+H   G L L ++L
Sbjct: 339 YADSGATSHVTANPNNVEQKVDYSGTENVIVANGNKLSISHIGSTNIHASGGSLKLKDVL 398

Query: 61  YVPEIIKNLVSVSKLTNDNNVVDKDSGVALLIERLKDGLYLLDNVNQLINKAPSTSELSV 120
            VP+I KNL             DK SG  LL   LKD LY LD  ++     P+ +    
Sbjct: 399 RVPDIAKNL-------------DKASGRTLLKGTLKDNLYRLDRSHRSPPATPTLTAPLF 458

Query: 121 AH-LTNWSNQ------------FSSHAALATSTTISKLLLHRRLGHPSPEILSTYS 164
           AH + + SN             F+ H  +  STT+     H+RLGHPS ++L+  S
Sbjct: 459 AHTVVSLSNNTLSSEKPTPSFPFAEHINVVVSTTV----WHKRLGHPSIQVLTLQS 497

The following BLAST results are available for this feature:

BLAST of Bhi02M000610 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q94HW2\|POLR1_ARATH	1.3e-14	36.22	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
sp\|Q9ZT94\|POLR2_ARATH	1.7e-11	33.33	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]

BLAST of Bhi02M000610 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi02M000610 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2K3LJ49\|A0A2K3LJ49_TRIPR	8.5e-16	41.18	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Trifolium pratens...	[more]
tr\|A0A2K3NEN7\|A0A2K3NEN7_TRIPR	1.4e-15	40.00	Copia-like polyprotein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g024786...	[more]
tr\|A0A2K3NIC3\|A0A2K3NIC3_TRIPR	1.4e-15	40.00	Copia protein (Gag-int-pol protein) (Fragment) OS=Trifolium pratense OX=57577 GN...	[more]
tr\|A0A2K3LRE0\|A0A2K3LRE0_TRIPR	3.2e-15	38.82	Glutamate receptor OS=Trifolium pratense OX=57577 GN=L195_g037121 PE=4 SV=1	[more]
tr\|A0A2K3MUJ9\|A0A2K3MUJ9_TRIPR	5.5e-15	40.00	Putative retrotransposon Ty1-copia subclass protein (Fragment) OS=Trifolium prat...	[more]

BLAST of Bhi02M000610 vs. NCBI nr


Match Name	E-value	Identity	Description
PNX78574.1	1.3e-15	41.18	retrovirus-related Pol polyprotein from transposon TNT 1-94 [Trifolium pratense]	[more]
PNY01489.1	2.2e-15	40.00	copia-like polyprotein, partial [Trifolium pratense]	[more]
PNY02796.1	2.2e-15	40.00	copia protein (gag-int-pol protein), partial [Trifolium pratense]	[more]
PNX81106.1	4.9e-15	38.82	glutamate receptor [Trifolium pratense]	[more]
XP_022151683.1	6.4e-15	36.36	uncharacterized protein LOC111019598 [Momordica charantia]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi02G000610	Bhi02G000610	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi02M000610.exon2	Bhi02M000610.exon2	exon
Bhi02M000610.exon1	Bhi02M000610.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi02M000610	cds.Bhi02M000610	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi02M000610	Bhi02M000610-protein	polypeptide