Bhi02G000610 (gene) Wax gourd

Overview
NameBhi02G000610
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Locationchr2 : 16290236 .. 16290820 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
TATATTGACAGTGGAGCCTCAACACATGTAACCAACAGCCCAAACTTCTTTCAATCCTCCTCCAGCTACACAAGTAATGACAGAGTTGTTGTTGGTAATGGTACTCCTCTTAGCATATCTCAGTCAGGACACTCAAATCTACATACTAAGAATGGCATTCTGTCCCTATTAAATATACTTTATGTACCTGAAATCATAAAAAATTTAGTCAGTGTATCCAAGTTGACAAATGATAATAATGTTGTGGTTGAATTTCATGCTGCTTTTTGTGTGGTTAAGGACAAGGACTCAGGGGTGGCACTTCTGATCGAACGACTTAAAGATGGACTCTACCTTTTGGACAATGTCAACCAGCTGATAAATAAAGCACCCTCCACATCAGAACTCTCAGTTGCTCATTTGACAAATTGGTCCAACCAGTTTTCCTCACACGCTGCTCTTGCAACCAGTACCACCATCTCCAAACTACTTCTCCATAGGCGATTAGGCCATCCATCCCCTGAAATTTTGTCTACTTATTCTGTGTTAATCAAATATAACCAATCCACTAAGCTACCAAGGGGACCTTATGAACTTGTGGCTTGA

mRNA sequence

TATATTGACAGTGGAGCCTCAACACATGTAACCAACAGCCCAAACTTCTTTCAATCCTCCTCCAGCTACACAAGTAATGACAGAGTTGTTGTTGGTAATGGTACTCCTCTTAGCATATCTCAGTCAGGACACTCAAATCTACATACTAAGAATGGCATTCTGTCCCTATTAAATATACTTTATGTACCTGAAATCATAAAAAATTTAGTCAGTGTATCCAAGTTGACAAATGATAATAATGTTGTGGACAAGGACTCAGGGGTGGCACTTCTGATCGAACGACTTAAAGATGGACTCTACCTTTTGGACAATGTCAACCAGCTGATAAATAAAGCACCCTCCACATCAGAACTCTCAGTTGCTCATTTGACAAATTGGTCCAACCAGTTTTCCTCACACGCTGCTCTTGCAACCAGTACCACCATCTCCAAACTACTTCTCCATAGGCGATTAGGCCATCCATCCCCTGAAATTTTGTCTACTTATTCTGTGTTAATCAAATATAACCAATCCACTAAGCTACCAAGGGGACCTTATGAACTTGTGGCTTGA

Coding sequence (CDS)

TATATTGACAGTGGAGCCTCAACACATGTAACCAACAGCCCAAACTTCTTTCAATCCTCCTCCAGCTACACAAGTAATGACAGAGTTGTTGTTGGTAATGGTACTCCTCTTAGCATATCTCAGTCAGGACACTCAAATCTACATACTAAGAATGGCATTCTGTCCCTATTAAATATACTTTATGTACCTGAAATCATAAAAAATTTAGTCAGTGTATCCAAGTTGACAAATGATAATAATGTTGTGGACAAGGACTCAGGGGTGGCACTTCTGATCGAACGACTTAAAGATGGACTCTACCTTTTGGACAATGTCAACCAGCTGATAAATAAAGCACCCTCCACATCAGAACTCTCAGTTGCTCATTTGACAAATTGGTCCAACCAGTTTTCCTCACACGCTGCTCTTGCAACCAGTACCACCATCTCCAAACTACTTCTCCATAGGCGATTAGGCCATCCATCCCCTGAAATTTTGTCTACTTATTCTGTGTTAATCAAATATAACCAATCCACTAAGCTACCAAGGGGACCTTATGAACTTGTGGCTTGA

Protein sequence

YIDSGASTHVTNSPNFFQSSSSYTSNDRVVVGNGTPLSISQSGHSNLHTKNGILSLLNILYVPEIIKNLVSVSKLTNDNNVVDKDSGVALLIERLKDGLYLLDNVNQLINKAPSTSELSVAHLTNWSNQFSSHAALATSTTISKLLLHRRLGHPSPEILSTYSVLIKYNQSTKLPRGPYELVA
Homology
[Close]
BLAST of Bhi02G000610 vs. Swiss-Prot
Match: sp|Q94HW2|POLR1_ARATH (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.3e-14
Identity = 67/185 (36.22%), Postives = 96/185 (51.89%), Query Frame = 0 

Query: 2   IDSGASTHVTNSPNFFQSSSSYTSNDRVVVGNGTPLSISQSGHSNLHTKNGILSLLNILY 61
           +DSGA+ H+T+  N       YT  D V+V +G+ + IS +G ++L TK+  L+L NILY
Sbjct: 333 LDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLNLHNILY 392

Query: 62  VPEIIKNLVSVSKLTNDN-----------NVVDKDSGVALLIERLKDGLYLLDNVNQLIN 121
           VP I KNL+SV +L N N            V D ++GV LL  + KD LY          
Sbjct: 393 VPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELY---------- 452

Query: 122 KAPSTSELSVAHLTNWSNQFSSHAALATSTTISKLLLHRRLGHPSPEILSTYSVLIKYNQ 176
           + P  S   V       + F+S ++ AT ++      H RLGHP+P IL+  SV+  Y+ 
Sbjct: 453 EWPIASSQPV-------SLFASPSSKATHSS-----WHARLGHPAPSILN--SVISNYSL 493

[Close]
BLAST of Bhi02G000610 vs. Swiss-Prot
Match: sp|Q9ZT94|POLR2_ARATH (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.7e-11
Identity = 57/171 (33.33%), Postives = 86/171 (50.29%), Query Frame = 0 

Query: 2   IDSGASTHVTNSPNFFQSSSSYTSNDRVVVGNGTPLSISQSGHSNLHTKNGILSLLNILY 61
           +DSGA+ H+T+  N       YT  D V++ +G+ + I+ +G ++L T +  L L  +LY
Sbjct: 312 LDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLY 371

Query: 62  VPEIIKNLVSVSKLTNDN-----------NVVDKDSGVALLIERLKDGLYLLDNVNQLIN 121
           VP I KNL+SV +L N N            V D ++GV LL  + KD LY          
Sbjct: 372 VPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELY---------- 431

Query: 122 KAPSTSELSVAHLTNWSNQFSSHAALATSTTISKLLLHRRLGHPSPEILST 162
           + P  S  +V       + F+S  + AT ++      H RLGHPS  IL++
Sbjct: 432 EWPIASSQAV-------SMFASPCSKATHSS-----WHSRLGHPSLAILNS 460

[Close]
BLAST of Bhi02G000610 vs. TrEMBL
Match: tr|A0A2K3LJ49|A0A2K3LJ49_TRIPR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Trifolium pratense OX=57577 GN=L195_g034552 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 8.5e-16
Identity = 70/170 (41.18%), Postives = 90/170 (52.94%), Query Frame = 0 

Query: 1   YIDSGASTHVTNSPNFFQSSSSYTSNDRVVVGNGTPLSISQSGHSNLHTKNGILSLLNIL 60
           Y DSGAS HVT+  + FQ  +  +  + ++VGNG  L I  SG S L  KN  L+L ++L
Sbjct: 315 YFDSGASNHVTHQADKFQELTENSGKNSLIVGNGAKLKIDASGSSKL--KN--LNLHDVL 374

Query: 61  YVPEIIKNLVSVSKLTNDNNVV-----------DKDSGVALLIERLKDGLYLLDNVNQLI 120
           YVP+I KNL+SVSKLT+DNN++           DK +G  LL   LKDGLY L N +   
Sbjct: 375 YVPQITKNLLSVSKLTSDNNIIVEFDNDCCFVKDKLTGKVLLRGILKDGLYQLSNGSSQT 434

Query: 121 NKAPSTSELSVAHLTNWSNQFSSHAALATSTTISKLLLHRRLGHPSPEIL 160
           NK P    LSV    +W                     HR+LGHPS  +L
Sbjct: 435 NKDPCV-YLSVKE--SW---------------------HRKLGHPSNNVL 456

[Close]
BLAST of Bhi02G000610 vs. TrEMBL
Match: tr|A0A2K3NEN7|A0A2K3NEN7_TRIPR (Copia-like polyprotein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g024786 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.4e-15
Identity = 68/170 (40.00%), Postives = 91/170 (53.53%), Query Frame = 0 

Query: 1   YIDSGASTHVTNSPNFFQSSSSYTSNDRVVVGNGTPLSISQSGHSNLHTKNGILSLLNIL 60
           Y DSGAS HVT+  + FQ  + +   + ++VGNG  L I  SG + L+T    L+L ++L
Sbjct: 313 YFDSGASNHVTHQTDKFQGFNEHNGKNSLMVGNGEKLKIVASGSTKLNT----LNLHDVL 372

Query: 61  YVPEIIKNLVSVSKLTNDNN-----------VVDKDSGVALLIERLKDGLYLLDNVNQLI 120
           YVP+I KNL+SVSKLT DNN           V DK +G  LL  RLKDGLY L +V+   
Sbjct: 373 YVPQITKNLLSVSKLTADNNIFVEFDANCCSVKDKLTGQTLLKGRLKDGLYQLSDVSPQS 432

Query: 121 NKAPSTSELSVAHLTNWSNQFSSHAALATSTTISKLLLHRRLGHPSPEIL 160
           NK P    +SV    +W                     HR+LGHP+ ++L
Sbjct: 433 NKDPCV-YMSVKE--SW---------------------HRKLGHPNNKVL 454

[Close]
BLAST of Bhi02G000610 vs. TrEMBL
Match: tr|A0A2K3NIC3|A0A2K3NIC3_TRIPR (Copia protein (Gag-int-pol protein) (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g026116 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.4e-15
Identity = 68/170 (40.00%), Postives = 93/170 (54.71%), Query Frame = 0 

Query: 1   YIDSGASTHVTNSPNFFQSSSSYTSNDRVVVGNGTPLSISQSGHSNLHTKNGILSLLNIL 60
           Y DSGAS HVT+  + FQ  + +   + ++VGNG  L I  SG + L  KN  L+L ++L
Sbjct: 38  YFDSGASNHVTHQTDKFQDLTGHNGKNSLMVGNGEKLKIVASGSTKL--KN--LNLYDVL 97

Query: 61  YVPEIIKNLVSVSKLTNDNNVV-----------DKDSGVALLIERLKDGLYLLDNVNQLI 120
           YVPEI KNL+SVSKLT DNN++           DK +G ALL  +LK+GLY + NV+   
Sbjct: 98  YVPEITKNLLSVSKLTADNNIIVEFDADCCSVKDKLTGKALLKGKLKEGLYQVSNVSSQS 157

Query: 121 NKAPSTSELSVAHLTNWSNQFSSHAALATSTTISKLLLHRRLGHPSPEIL 160
           NK   T  +SV    +W                     HR+LGHP+ ++L
Sbjct: 158 NKDACT-YMSVKE--SW---------------------HRKLGHPNNKVL 179

[Close]
BLAST of Bhi02G000610 vs. TrEMBL
Match: tr|A0A2K3LRE0|A0A2K3LRE0_TRIPR (Glutamate receptor OS=Trifolium pratense OX=57577 GN=L195_g037121 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 3.2e-15
Identity = 66/170 (38.82%), Postives = 90/170 (52.94%), Query Frame = 0 

Query: 1   YIDSGASTHVTNSPNFFQSSSSYTSNDRVVVGNGTPLSISQSGHSNLHTKNGILSLLNIL 60
           Y DSGAS HVT+  + F+  + +T  + ++VGNG  L I  SG S ++T N    L N+L
Sbjct: 316 YFDSGASNHVTHQADRFEDLTEHTGKNSLMVGNGEKLKIVASGSSKINTVN----LHNVL 375

Query: 61  YVPEIIKNLVSVSKLTNDNNVV-----------DKDSGVALLIERLKDGLYLLDNVNQLI 120
           YVP+I KNL+SVSKLT+DNN +           DK +G  LL  RLKDGLY L +  Q  
Sbjct: 376 YVPQITKNLLSVSKLTSDNNAIVEFDHDYCYVKDKVTGKVLLKGRLKDGLYQLSDATQ-- 435

Query: 121 NKAPSTSELSVAHLTNWSNQFSSHAALATSTTISKLLLHRRLGHPSPEIL 160
                T++ S  +L+                   K   HR+LGHP+ + L
Sbjct: 436 -----TNKDSCVYLS------------------VKESWHRKLGHPNNKAL 456

[Close]
BLAST of Bhi02G000610 vs. TrEMBL
Match: tr|A0A2K3MUJ9|A0A2K3MUJ9_TRIPR (Putative retrotransposon Ty1-copia subclass protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g017679 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 5.5e-15
Identity = 68/170 (40.00%), Postives = 88/170 (51.76%), Query Frame = 0 

Query: 1   YIDSGASTHVTNSPNFFQSSSSYTSNDRVVVGNGTPLSISQSGHSNLHTKNGILSLLNIL 60
           Y DSGAS HVT+     Q  +     + ++VGNG  L I  SG + L+  N    L N+L
Sbjct: 313 YFDSGASNHVTHQSGQLQDLNENNGKNSLLVGNGEKLKILASGSTKLNDVN----LRNVL 372

Query: 61  YVPEIIKNLVSVSKLTNDNN-----------VVDKDSGVALLIERLKDGLYLLDNVNQLI 120
           YVPEI KNL+SVSKLT DNN           V DK +G ALL  RLKDGLY L       
Sbjct: 373 YVPEITKNLLSVSKLTIDNNALVEFDENYCYVKDKLTGKALLKGRLKDGLYQLS-----A 432

Query: 121 NKAPSTSELSVAHLTNWSNQFSSHAALATSTTISKLLLHRRLGHPSPEIL 160
           NK P T++   A+++                   K + HR+LGHP+ ++L
Sbjct: 433 NKEPPTNKDPCAYIS------------------LKEIWHRKLGHPNNKVL 455

[Close]
BLAST of Bhi02G000610 vs. NCBI nr
Match: PNX78574.1 (retrovirus-related Pol polyprotein from transposon TNT 1-94 [Trifolium pratense])

HSP 1 Score: 92.8 bits (229), Expect = 1.3e-15
Identity = 70/170 (41.18%), Postives = 90/170 (52.94%), Query Frame = 0 

Query: 1   YIDSGASTHVTNSPNFFQSSSSYTSNDRVVVGNGTPLSISQSGHSNLHTKNGILSLLNIL 60
           Y DSGAS HVT+  + FQ  +  +  + ++VGNG  L I  SG S L  KN  L+L ++L
Sbjct: 315 YFDSGASNHVTHQADKFQELTENSGKNSLIVGNGAKLKIDASGSSKL--KN--LNLHDVL 374

Query: 61  YVPEIIKNLVSVSKLTNDNNVV-----------DKDSGVALLIERLKDGLYLLDNVNQLI 120
           YVP+I KNL+SVSKLT+DNN++           DK +G  LL   LKDGLY L N +   
Sbjct: 375 YVPQITKNLLSVSKLTSDNNIIVEFDNDCCFVKDKLTGKVLLRGILKDGLYQLSNGSSQT 434

Query: 121 NKAPSTSELSVAHLTNWSNQFSSHAALATSTTISKLLLHRRLGHPSPEIL 160
           NK P    LSV    +W                     HR+LGHPS  +L
Sbjct: 435 NKDPCV-YLSVKE--SW---------------------HRKLGHPSNNVL 456

[Close]
BLAST of Bhi02G000610 vs. NCBI nr
Match: PNY01489.1 (copia-like polyprotein, partial [Trifolium pratense])

HSP 1 Score: 92.0 bits (227), Expect = 2.2e-15
Identity = 68/170 (40.00%), Postives = 91/170 (53.53%), Query Frame = 0 

Query: 1   YIDSGASTHVTNSPNFFQSSSSYTSNDRVVVGNGTPLSISQSGHSNLHTKNGILSLLNIL 60
           Y DSGAS HVT+  + FQ  + +   + ++VGNG  L I  SG + L+T    L+L ++L
Sbjct: 313 YFDSGASNHVTHQTDKFQGFNEHNGKNSLMVGNGEKLKIVASGSTKLNT----LNLHDVL 372

Query: 61  YVPEIIKNLVSVSKLTNDNN-----------VVDKDSGVALLIERLKDGLYLLDNVNQLI 120
           YVP+I KNL+SVSKLT DNN           V DK +G  LL  RLKDGLY L +V+   
Sbjct: 373 YVPQITKNLLSVSKLTADNNIFVEFDANCCSVKDKLTGQTLLKGRLKDGLYQLSDVSPQS 432

Query: 121 NKAPSTSELSVAHLTNWSNQFSSHAALATSTTISKLLLHRRLGHPSPEIL 160
           NK P    +SV    +W                     HR+LGHP+ ++L
Sbjct: 433 NKDPCV-YMSVKE--SW---------------------HRKLGHPNNKVL 454

[Close]
BLAST of Bhi02G000610 vs. NCBI nr
Match: PNY02796.1 (copia protein (gag-int-pol protein), partial [Trifolium pratense])

HSP 1 Score: 92.0 bits (227), Expect = 2.2e-15
Identity = 68/170 (40.00%), Postives = 93/170 (54.71%), Query Frame = 0 

Query: 1   YIDSGASTHVTNSPNFFQSSSSYTSNDRVVVGNGTPLSISQSGHSNLHTKNGILSLLNIL 60
           Y DSGAS HVT+  + FQ  + +   + ++VGNG  L I  SG + L  KN  L+L ++L
Sbjct: 38  YFDSGASNHVTHQTDKFQDLTGHNGKNSLMVGNGEKLKIVASGSTKL--KN--LNLYDVL 97

Query: 61  YVPEIIKNLVSVSKLTNDNNVV-----------DKDSGVALLIERLKDGLYLLDNVNQLI 120
           YVPEI KNL+SVSKLT DNN++           DK +G ALL  +LK+GLY + NV+   
Sbjct: 98  YVPEITKNLLSVSKLTADNNIIVEFDADCCSVKDKLTGKALLKGKLKEGLYQVSNVSSQS 157

Query: 121 NKAPSTSELSVAHLTNWSNQFSSHAALATSTTISKLLLHRRLGHPSPEIL 160
           NK   T  +SV    +W                     HR+LGHP+ ++L
Sbjct: 158 NKDACT-YMSVKE--SW---------------------HRKLGHPNNKVL 179

[Close]
BLAST of Bhi02G000610 vs. NCBI nr
Match: PNX81106.1 (glutamate receptor [Trifolium pratense])

HSP 1 Score: 90.9 bits (224), Expect = 4.9e-15
Identity = 66/170 (38.82%), Postives = 90/170 (52.94%), Query Frame = 0 

Query: 1   YIDSGASTHVTNSPNFFQSSSSYTSNDRVVVGNGTPLSISQSGHSNLHTKNGILSLLNIL 60
           Y DSGAS HVT+  + F+  + +T  + ++VGNG  L I  SG S ++T N    L N+L
Sbjct: 316 YFDSGASNHVTHQADRFEDLTEHTGKNSLMVGNGEKLKIVASGSSKINTVN----LHNVL 375

Query: 61  YVPEIIKNLVSVSKLTNDNNVV-----------DKDSGVALLIERLKDGLYLLDNVNQLI 120
           YVP+I KNL+SVSKLT+DNN +           DK +G  LL  RLKDGLY L +  Q  
Sbjct: 376 YVPQITKNLLSVSKLTSDNNAIVEFDHDYCYVKDKVTGKVLLKGRLKDGLYQLSDATQ-- 435

Query: 121 NKAPSTSELSVAHLTNWSNQFSSHAALATSTTISKLLLHRRLGHPSPEIL 160
                T++ S  +L+                   K   HR+LGHP+ + L
Sbjct: 436 -----TNKDSCVYLS------------------VKESWHRKLGHPNNKAL 456

[Close]
BLAST of Bhi02G000610 vs. NCBI nr
Match: XP_022151683.1 (uncharacterized protein LOC111019598 [Momordica charantia])

HSP 1 Score: 90.5 bits (223), Expect = 6.4e-15
Identity = 64/176 (36.36%), Postives = 89/176 (50.57%), Query Frame = 0 

Query: 1   YIDSGASTHVTNSPNFFQSSSSYTSNDRVVVGNGTPLSISQSGHSNLHTKNGILSLLNIL 60
           Y DSGA++HVT +PN  +    Y+  + V+V NG  LSIS  G +N+H   G L L ++L
Sbjct: 339 YADSGATSHVTANPNNVEQKVDYSGTENVIVANGNKLSISHIGSTNIHASGGSLKLKDVL 398

Query: 61  YVPEIIKNLVSVSKLTNDNNVVDKDSGVALLIERLKDGLYLLDNVNQLINKAPSTSELSV 120
            VP+I KNL             DK SG  LL   LKD LY LD  ++     P+ +    
Sbjct: 399 RVPDIAKNL-------------DKASGRTLLKGTLKDNLYRLDRSHRSPPATPTLTAPLF 458

Query: 121 AH-LTNWSNQ------------FSSHAALATSTTISKLLLHRRLGHPSPEILSTYS 164
           AH + + SN             F+ H  +  STT+     H+RLGHPS ++L+  S
Sbjct: 459 AHTVVSLSNNTLSSEKPTPSFPFAEHINVVVSTTV----WHKRLGHPSIQVLTLQS 497

The following BLAST results are available for this feature:
BLAST of Bhi02G000610 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q94HW2|POLR1_ARATH1.3e-1436.22Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
sp|Q9ZT94|POLR2_ARATH1.7e-1133.33Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
BLAST of Bhi02G000610 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi02G000610 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A2K3LJ49|A0A2K3LJ49_TRIPR8.5e-1641.18Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Trifolium pratens... [more]
tr|A0A2K3NEN7|A0A2K3NEN7_TRIPR1.4e-1540.00Copia-like polyprotein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g024786... [more]
tr|A0A2K3NIC3|A0A2K3NIC3_TRIPR1.4e-1540.00Copia protein (Gag-int-pol protein) (Fragment) OS=Trifolium pratense OX=57577 GN... [more]
tr|A0A2K3LRE0|A0A2K3LRE0_TRIPR3.2e-1538.82Glutamate receptor OS=Trifolium pratense OX=57577 GN=L195_g037121 PE=4 SV=1[more]
tr|A0A2K3MUJ9|A0A2K3MUJ9_TRIPR5.5e-1540.00Putative retrotransposon Ty1-copia subclass protein (Fragment) OS=Trifolium prat... [more]
BLAST of Bhi02G000610 vs. NCBI nr
Match NameE-valueIdentityDescription
PNX78574.11.3e-1541.18retrovirus-related Pol polyprotein from transposon TNT 1-94 [Trifolium pratense][more]
PNY01489.12.2e-1540.00copia-like polyprotein, partial [Trifolium pratense][more]
PNY02796.12.2e-1540.00copia protein (gag-int-pol protein), partial [Trifolium pratense][more]
PNX81106.14.9e-1538.82glutamate receptor [Trifolium pratense][more]
XP_022151683.16.4e-1536.36uncharacterized protein LOC111019598 [Momordica charantia][more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi02M000610Bhi02M000610mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi02G000610Cucurbita pepo (Zucchini)cpewgoB0466
Bhi02G000610Wax gourdwgowgoB047
Bhi02G000610Wax gourdwgowgoB052
Bhi02G000610Cucumber (Gy14) v1cgywgoB119
Bhi02G000610Cucumber (Gy14) v1cgywgoB120
Bhi02G000610Cucumber (Gy14) v1cgywgoB123
Bhi02G000610Cucumber (Gy14) v2cgybwgoB095
Bhi02G000610Cucumber (Gy14) v2cgybwgoB204
Bhi02G000610Cucumber (Gy14) v2cgybwgoB207
Bhi02G000610Cucurbita maxima (Rimu)cmawgoB0076
Bhi02G000610Cucurbita maxima (Rimu)cmawgoB0150
Bhi02G000610Cucurbita moschata (Rifu)cmowgoB0070
Bhi02G000610Cucurbita moschata (Rifu)cmowgoB0145
Bhi02G000610Cucurbita pepo (Zucchini)cpewgoB0896
Bhi02G000610Wild cucumber (PI 183967)cpiwgoB101
Bhi02G000610Wild cucumber (PI 183967)cpiwgoB212
Bhi02G000610Wild cucumber (PI 183967)cpiwgoB216
Bhi02G000610Cucumber (Chinese Long) v3cucwgoB106
Bhi02G000610Cucumber (Chinese Long) v3cucwgoB218
Bhi02G000610Cucumber (Chinese Long) v3cucwgoB221
Bhi02G000610Cucumber (Chinese Long) v2cuwgoB097
Bhi02G000610Cucumber (Chinese Long) v2cuwgoB212
Bhi02G000610Cucumber (Chinese Long) v2cuwgoB216
Bhi02G000610Bottle gourd (USVL1VR-Ls)lsiwgoB141
Bhi02G000610Bottle gourd (USVL1VR-Ls)lsiwgoB145
Bhi02G000610Bottle gourd (USVL1VR-Ls)lsiwgoB523
Bhi02G000610Melon (DHL92) v3.6.1medwgoB306
Bhi02G000610Melon (DHL92) v3.6.1medwgoB494
Bhi02G000610Melon (DHL92) v3.5.1mewgoB307
Bhi02G000610Melon (DHL92) v3.5.1mewgoB493
Bhi02G000610Watermelon (Charleston Gray)wcgwgoB547
Bhi02G000610Watermelon (97103) v2wgowmbB628
Bhi02G000610Watermelon (97103) v2wgowmbB655
Bhi02G000610Watermelon (97103) v1wgowmB677
Bhi02G000610Watermelon (97103) v1wgowmB684
Bhi02G000610Silver-seed gourdcarwgoB0925