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| Name | Bhi01M002197 |
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| Type | mRNA |
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| Organism | Benincasa hispida (Wax gourd) |
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| Description | Unknown protein |
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| Location | chr1 : 69815260 .. 69815679 (-) |
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| Sequence length | 420 |
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The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. ATGGATGTCAATGAAAATAATCTGAATGGAACAATTCCATCAAGTTTGGTAAATTGCACCGTTCTCACCTATATTAATTTCTCAAACAACAAGCTTACAGGTCATATACCAAATGAGTTGGGAAATCTTTTGAATCTTCAAAGTTTGAACTTGTCTCACAACCTCTTGGAAGGAGGGCCTTTGCCATATTCCCTGTCAAATTGTACCAAAATGGATGGGTTTGATGTAGGATTTAATTTATTGAATGGTTCTATACCTCATAGTCTGGCCAGGTGGAAAGTTATATCCACGTTGATATTAAAAGAGAACCGATTTACTGGAGGCCTACCAAATGTAATATCAGAGGTTCAAAACCTTTTACTGCTAGATCTTGGTGGCAATTTGTTTGGAGGTGAATTCCTTCATCTATTGGAGCTTTGA mRNA sequence ATGGATGTCAATGAAAATAATCTGAATGGAACAATTCCATCAAGTTTGGTAAATTGCACCGTTCTCACCTATATTAATTTCTCAAACAACAAGCTTACAGGTCATATACCAAATGAGTTGGGAAATCTTTTGAATCTTCAAAGTTTGAACTTGTCTCACAACCTCTTGGAAGGAGGGCCTTTGCCATATTCCCTGTCAAATTGTACCAAAATGGATGGGTTTGATGTAGGATTTAATTTATTGAATGGTTCTATACCTCATAGTCTGGCCAGGTGGAAAGTTATATCCACGTTGATATTAAAAGAGAACCGATTTACTGGAGGCCTACCAAATGTAATATCAGAGGTTCAAAACCTTTTACTGCTAGATCTTGGTGGCAATTTGTTTGGAGGTGAATTCCTTCATCTATTGGAGCTTTGA Coding sequence (CDS) ATGGATGTCAATGAAAATAATCTGAATGGAACAATTCCATCAAGTTTGGTAAATTGCACCGTTCTCACCTATATTAATTTCTCAAACAACAAGCTTACAGGTCATATACCAAATGAGTTGGGAAATCTTTTGAATCTTCAAAGTTTGAACTTGTCTCACAACCTCTTGGAAGGAGGGCCTTTGCCATATTCCCTGTCAAATTGTACCAAAATGGATGGGTTTGATGTAGGATTTAATTTATTGAATGGTTCTATACCTCATAGTCTGGCCAGGTGGAAAGTTATATCCACGTTGATATTAAAAGAGAACCGATTTACTGGAGGCCTACCAAATGTAATATCAGAGGTTCAAAACCTTTTACTGCTAGATCTTGGTGGCAATTTGTTTGGAGGTGAATTCCTTCATCTATTGGAGCTTTGA Protein sequence MDVNENNLNGTIPSSLVNCTVLTYINFSNNKLTGHIPNELGNLLNLQSLNLSHNLLEGGPLPYSLSNCTKMDGFDVGFNLLNGSIPHSLARWKVISTLILKENRFTGGLPNVISEVQNLLLLDLGGNLFGGEFLHLLEL
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
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| GO:0005515 | protein binding |
GO Assignments
This mRNA is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
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| cds.Bhi01M002197 | cds.Bhi01M002197 | CDS |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
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| Bhi01M002197.exon1 | Bhi01M002197.exon1 | exon |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
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| Bhi01M002197 | Bhi01M002197-protein | polypeptide |
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| IPR032675 | Leucine-rich repeat domain superfamily | GENE3D | G3DSA:3.80.10.10 | | coord: 1..138
e-value: 9.7E-34
score: 118.5 |
| IPR001611 | Leucine-rich repeat | PFAM | PF13855 | LRR_8 | coord: 2..56
e-value: 1.1E-6
score: 28.2 |
| None | No IPR available | PANTHER | PTHR27004:SF57 | SUBFAMILY NOT NAMED | coord: 69..132 |
| None | No IPR available | PANTHER | PTHR27004:SF57 | SUBFAMILY NOT NAMED | coord: 22..111 |
| None | No IPR available | PANTHER | PTHR27004 | FAMILY NOT NAMED | coord: 1..88
coord: 22..111 |
| None | No IPR available | PANTHER | PTHR27004:SF57 | SUBFAMILY NOT NAMED | coord: 1..88 |
| None | No IPR available | PANTHER | PTHR27004 | FAMILY NOT NAMED | coord: 69..132 |
| None | No IPR available | SUPERFAMILY | SSF52058 | L domain-like | coord: 2..132 |
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