Bhi01G002197 (gene) Wax gourd

NameBhi01G002197
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr1 : 69815260 .. 69815679 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGTCAATGAAAATAATCTGAATGGAACAATTCCATCAAGTTTGGTAAATTGCACCGTTCTCACCTATATTAATTTCTCAAACAACAAGCTTACAGGTCATATACCAAATGAGTTGGGAAATCTTTTGAATCTTCAAAGTTTGAACTTGTCTCACAACCTCTTGGAAGGAGGGCCTTTGCCATATTCCCTGTCAAATTGTACCAAAATGGATGGGTTTGATGTAGGATTTAATTTATTGAATGGTTCTATACCTCATAGTCTGGCCAGGTGGAAAGTTATATCCACGTTGATATTAAAAGAGAACCGATTTACTGGAGGCCTACCAAATGTAATATCAGAGGTTCAAAACCTTTTACTGCTAGATCTTGGTGGCAATTTGTTTGGAGGTGAATTCCTTCATCTATTGGAGCTTTGA

mRNA sequence

ATGGATGTCAATGAAAATAATCTGAATGGAACAATTCCATCAAGTTTGGTAAATTGCACCGTTCTCACCTATATTAATTTCTCAAACAACAAGCTTACAGGTCATATACCAAATGAGTTGGGAAATCTTTTGAATCTTCAAAGTTTGAACTTGTCTCACAACCTCTTGGAAGGAGGGCCTTTGCCATATTCCCTGTCAAATTGTACCAAAATGGATGGGTTTGATGTAGGATTTAATTTATTGAATGGTTCTATACCTCATAGTCTGGCCAGGTGGAAAGTTATATCCACGTTGATATTAAAAGAGAACCGATTTACTGGAGGCCTACCAAATGTAATATCAGAGGTTCAAAACCTTTTACTGCTAGATCTTGGTGGCAATTTGTTTGGAGGTGAATTCCTTCATCTATTGGAGCTTTGA

Coding sequence (CDS)

ATGGATGTCAATGAAAATAATCTGAATGGAACAATTCCATCAAGTTTGGTAAATTGCACCGTTCTCACCTATATTAATTTCTCAAACAACAAGCTTACAGGTCATATACCAAATGAGTTGGGAAATCTTTTGAATCTTCAAAGTTTGAACTTGTCTCACAACCTCTTGGAAGGAGGGCCTTTGCCATATTCCCTGTCAAATTGTACCAAAATGGATGGGTTTGATGTAGGATTTAATTTATTGAATGGTTCTATACCTCATAGTCTGGCCAGGTGGAAAGTTATATCCACGTTGATATTAAAAGAGAACCGATTTACTGGAGGCCTACCAAATGTAATATCAGAGGTTCAAAACCTTTTACTGCTAGATCTTGGTGGCAATTTGTTTGGAGGTGAATTCCTTCATCTATTGGAGCTTTGA

Protein sequence

MDVNENNLNGTIPSSLVNCTVLTYINFSNNKLTGHIPNELGNLLNLQSLNLSHNLLEGGPLPYSLSNCTKMDGFDVGFNLLNGSIPHSLARWKVISTLILKENRFTGGLPNVISEVQNLLLLDLGGNLFGGEFLHLLEL
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi01M002197Bhi01M002197mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3DG3DSA:3.80.10.10coord: 1..138
e-value: 9.7E-34
score: 118.5
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 2..56
e-value: 1.1E-6
score: 28.2
NoneNo IPR availablePANTHERPTHR27004:SF57SUBFAMILY NOT NAMEDcoord: 69..132
NoneNo IPR availablePANTHERPTHR27004:SF57SUBFAMILY NOT NAMEDcoord: 22..111
NoneNo IPR availablePANTHERPTHR27004FAMILY NOT NAMEDcoord: 1..88
coord: 22..111
NoneNo IPR availablePANTHERPTHR27004:SF57SUBFAMILY NOT NAMEDcoord: 1..88
NoneNo IPR availablePANTHERPTHR27004FAMILY NOT NAMEDcoord: 69..132
NoneNo IPR availableSUPERFAMILYSSF52058L domain-likecoord: 2..132